RNA–Protein interactions for RNA: ENST00000534839.1

TNC-209, Transcript of tenascin C, humanhuman

TSL 3

Gene TNC, Length 734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-209ENST00000534839 MRPL38Q96DV4 380 aaKnown RBP12.38□□□□□ -0.43
TNC-209ENST00000534839 FAM184BQ9ULE4 1060 aa12.38□□□□□ -0.43
TNC-209ENST00000534839 ZBTB21Q9ULJ3 1066 aa12.38□□□□□ -0.43
TNC-209ENST00000534839 MAP4K5Q9Y4K4 846 aa12.38□□□□□ -0.43
TNC-209ENST00000534839 KIF16BQ96L93 1317 aa12.37□□□□□ -0.43
TNC-209ENST00000534839 LINC01553A4QN01 128 aa12.37□□□□□ -0.43
TNC-209ENST00000534839 ADCY6O43306 1168 aa12.37□□□□□ -0.43
TNC-209ENST00000534839 PGK2P07205 417 aa12.37□□□□□ -0.43
TNC-209ENST00000534839 VCAM1P19320 739 aa12.37□□□□□ -0.43
TNC-209ENST00000534839 FGFR2P21802 821 aa12.37□□□□□ -0.43
TNC-209ENST00000534839 DLX2Q07687 328 aaPredicted RBP12.37□□□□□ -0.43
TNC-209ENST00000534839 GNASQ5JWF2 1037 aa12.37□□□□□ -0.43
TNC-209ENST00000534839 NCAPG2Q86XI2 1143 aa12.37□□□□□ -0.43
TNC-209ENST00000534839 TMEM105Q8N8V8 129 aa12.37□□□□□ -0.43
TNC-209ENST00000534839 DNAJC18Q9H819 358 aa12.37□□□□□ -0.43
TNC-209ENST00000534839 SCN5AQ14524 2016 aa12.37□□□□□ -0.43
TNC-209ENST00000534839 SIPA1L1O43166 1804 aa12.37□□□□□ -0.43
TNC-209ENST00000534839 GRIN2DO15399 1336 aa12.37□□□□□ -0.43
TNC-209ENST00000534839 SALL1Q9NSC2 1324 aa12.37□□□□□ -0.43
TNC-209ENST00000534839 ANKRD11Q6UB99 2663 aaPredicted RBP12.36□□□□□ -0.43
TNC-209ENST00000534839 IFIT1P09914 478 aaKnown RBP12.36□□□□□ -0.43
TNC-209ENST00000534839 FSHRP23945 695 aa12.36□□□□□ -0.43
TNC-209ENST00000534839 GJA9P57773 515 aa12.36□□□□□ -0.43
TNC-209ENST00000534839 VAC14Q08AM6 782 aa12.36□□□□□ -0.43
TNC-209ENST00000534839 ZNF792Q3KQV3 632 aa12.36□□□□□ -0.43
TNC-209ENST00000534839 RPAINQ86UA6 219 aa12.36□□□□□ -0.43
TNC-209ENST00000534839 CLUAP1Q96AJ1 413 aa12.36□□□□□ -0.43
TNC-209ENST00000534839 KCTD15Q96SI1 283 aaPredicted RBP12.36□□□□□ -0.43
TNC-209ENST00000534839 UPF3AQ9H1J1 476 aaKnown RBP12.36□□□□□ -0.43
TNC-209ENST00000534839 MROH8Q9H579 483 aa12.36□□□□□ -0.43
TNC-209ENST00000534839 PRM3Q9NNZ6 103 aa12.36□□□□□ -0.43
TNC-209ENST00000534839 IGSF5Q9NSI5 407 aa12.36□□□□□ -0.43
TNC-209ENST00000534839 CNPY2Q9Y2B0 182 aa12.36□□□□□ -0.43
TNC-209ENST00000534839 PCDHB9Q9Y5E1 797 aa12.36□□□□□ -0.43
TNC-209ENST00000534839 SIP14410 1827 aa12.36□□□□□ -0.43
TNC-209ENST00000534839 LOC730098B7Z3J9 87 aa12.35□□□□□ -0.43
TNC-209ENST00000534839 CTAGE5O15320 804 aa12.35□□□□□ -0.43
TNC-209ENST00000534839 ZNF853P0CG23 659 aa12.35□□□□□ -0.43
TNC-209ENST00000534839 FCER1AP12319 257 aa12.35□□□□□ -0.43
TNC-209ENST00000534839 ITGA7Q13683 1181 aa12.35□□□□□ -0.43
TNC-209ENST00000534839 RSPO4Q2I0M5 234 aaPredicted RBP12.35□□□□□ -0.43
TNC-209ENST00000534839 TIGD5Q53EQ6 642 aa12.35□□□□□ -0.43
TNC-209ENST00000534839 DNAAF4Q8WXU2 420 aa12.35□□□□□ -0.43
TNC-209ENST00000534839 RIPOR3Q96MK2 946 aa12.35□□□□□ -0.43
TNC-209ENST00000534839 C17orf80Q9BSJ5 609 aa12.35□□□□□ -0.43
TNC-209ENST00000534839 KLF16Q9BXK1 252 aaPredicted RBP12.35□□□□□ -0.43
TNC-209ENST00000534839 RPAP3Q9H6T3 665 aaPredicted RBP12.35□□□□□ -0.43
TNC-209ENST00000534839 AAASQ9NRG9 546 aa12.35□□□□□ -0.43
TNC-209ENST00000534839 DACH1Q9UI36 760 aa12.35□□□□□ -0.43
TNC-209ENST00000534839 CTNNA3Q9UI47 895 aa12.35□□□□□ -0.43
TNC-209ENST00000534839 FASNP49327 2511 aaKnown RBP12.35□□□□□ -0.43
TNC-209ENST00000534839 A0A1B0GUL7 405 aa12.34□□□□□ -0.43
TNC-209ENST00000534839 APAF1O14727 1248 aa12.34□□□□□ -0.43
TNC-209ENST00000534839 BEX3Q00994 111 aa12.34□□□□□ -0.43
TNC-209ENST00000534839 SMAD4Q13485 552 aaKnown RBP12.34□□□□□ -0.43
TNC-209ENST00000534839 CXCL17Q6UXB2 119 aa12.34□□□□□ -0.43
TNC-209ENST00000534839 FEZ1Q99689 392 aa12.34□□□□□ -0.43
TNC-209ENST00000534839 SPC25Q9HBM1 224 aa12.34□□□□□ -0.43
TNC-209ENST00000534839 GINM1Q9NU53 330 aa12.34□□□□□ -0.43
TNC-209ENST00000534839 ZHX1Q9UKY1 873 aaPredicted RBP12.34□□□□□ -0.43
TNC-209ENST00000534839 MROH7-TTC4A0A0A0MT08 1334 aa12.34□□□□□ -0.43
TNC-209ENST00000534839 GPR75-ASB3A0A0A6YYF3 556 aa12.33□□□□□ -0.44
TNC-209ENST00000534839 SNAI1O95863 264 aaPredicted RBP12.33□□□□□ -0.44
TNC-209ENST00000534839 CYP2C9P11712 490 aa12.33□□□□□ -0.44
TNC-209ENST00000534839 NR5A1Q13285 461 aa12.33□□□□□ -0.44
TNC-209ENST00000534839 PLS1Q14651 629 aa12.33□□□□□ -0.44
TNC-209ENST00000534839 CBX2Q14781 532 aaPredicted RBP12.33□□□□□ -0.44
TNC-209ENST00000534839 PTPROQ16827 1216 aa12.33□□□□□ -0.44
TNC-209ENST00000534839 CTC1Q2NKJ3 1217 aa12.33□□□□□ -0.44
TNC-209ENST00000534839 DZIP1Q86YF9 867 aaKnown RBP12.33□□□□□ -0.44
TNC-209ENST00000534839 TSPYL6Q8N831 410 aa12.33□□□□□ -0.44
TNC-209ENST00000534839 FTOQ9C0B1 505 aaKnown RBP eCLIP12.33□□□□□ -0.44
TNC-209ENST00000534839 PI4KBQ9UBF8 816 aa12.33□□□□□ -0.44
TNC-209ENST00000534839 DIS3Q9Y2L1 958 aaKnown RBP12.33□□□□□ -0.44
TNC-209ENST00000534839 GTF3C3Q9Y5Q9 886 aa12.33□□□□□ -0.44
TNC-209ENST00000534839 GPR179Q6PRD1 2367 aa12.33□□□□□ -0.44
TNC-209ENST00000534839 WDR87Q6ZQQ6 2873 aa12.32□□□□□ -0.44
TNC-209ENST00000534839 ZIC2O95409 532 aaPredicted RBP12.32□□□□□ -0.44
TNC-209ENST00000534839 KCNJ6P48051 423 aa12.32□□□□□ -0.44
TNC-209ENST00000534839 USP14P54578 494 aa12.32□□□□□ -0.44
TNC-209ENST00000534839 WDR5P61964 334 aaKnown RBP12.32□□□□□ -0.44
TNC-209ENST00000534839 DEFB103AP81534 67 aa12.32□□□□□ -0.44
TNC-209ENST00000534839 PUM3Q15397 648 aaKnown RBP12.32□□□□□ -0.44
TNC-209ENST00000534839 KCNG4Q8TDN1 519 aa12.32□□□□□ -0.44
TNC-209ENST00000534839 MMP19Q99542 508 aa12.32□□□□□ -0.44
TNC-209ENST00000534839 RAD9AQ99638 391 aa12.32□□□□□ -0.44
TNC-209ENST00000534839 NSUN3Q9H649 340 aaKnown RBP12.32□□□□□ -0.44
TNC-209ENST00000534839 PCDHGC5Q9Y5F6 944 aa12.32□□□□□ -0.44
TNC-209ENST00000534839 ZNFX1Q9P2E3 1918 aaKnown RBP12.32□□□□□ -0.44
TNC-209ENST00000534839 TNKSO95271 1327 aa12.32□□□□□ -0.44
TNC-209ENST00000534839 COL11A1P12107 1806 aaPredicted RBP12.32□□□□□ -0.44
TNC-209ENST00000534839 CCER2I3L3R5 266 aa12.31□□□□□ -0.44
TNC-209ENST00000534839 BAIAP3O94812 1187 aa12.31□□□□□ -0.44
TNC-209ENST00000534839 GH2P01242 217 aa12.31□□□□□ -0.44
TNC-209ENST00000534839 RFC2P35250 354 aa12.31□□□□□ -0.44
TNC-209ENST00000534839 COG2Q14746 738 aa12.31□□□□□ -0.44
TNC-209ENST00000534839 INTS6LQ5JSJ4 861 aaKnown RBP12.31□□□□□ -0.44
TNC-209ENST00000534839 ACER1Q8TDN7 264 aa12.31□□□□□ -0.44
TNC-209ENST00000534839 STK31Q9BXU1 1019 aa12.31□□□□□ -0.44
TNC-209ENST00000534839 KIAA1683Q9H0B3 1180 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms