RNA–Protein interactions for RNA: ENST00000534405.5

SMPD1-210, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-210ENST00000534405 RRP36Q96EU6 259 aaKnown RBP21.24■□□□□ 0.99
SMPD1-210ENST00000534405 RNPC3Q96LT9 517 aaKnown RBP21.24■□□□□ 0.99
SMPD1-210ENST00000534405 NUTM2BA6NNL0 878 aaPredicted RBP21.24■□□□□ 0.99
SMPD1-210ENST00000534405 NUTM2EB1AL46 878 aaPredicted RBP21.24■□□□□ 0.99
SMPD1-210ENST00000534405 ORC4O43929 436 aa21.24■□□□□ 0.99
SMPD1-210ENST00000534405 PCP11498 1178 aaKnown RBP21.24■□□□□ 0.99
SMPD1-210ENST00000534405 PEX19P40855 299 aa21.24■□□□□ 0.99
SMPD1-210ENST00000534405 HDLBPQ00341 1268 aaKnown RBP21.24■□□□□ 0.99
SMPD1-210ENST00000534405 PTGDRQ13258 359 aa21.24■□□□□ 0.99
SMPD1-210ENST00000534405 XRCC4Q13426 336 aa21.24■□□□□ 0.99
SMPD1-210ENST00000534405 SLC4A8Q2Y0W8 1093 aa21.24■□□□□ 0.99
SMPD1-210ENST00000534405 SLC10A5Q5PT55 438 aa21.24■□□□□ 0.99
SMPD1-210ENST00000534405 TXNRD3Q86VQ6 643 aa21.24■□□□□ 0.99
SMPD1-210ENST00000534405 CPLX3Q8WVH0 158 aa21.24■□□□□ 0.99
SMPD1-210ENST00000534405 EBF2Q9HAK2 575 aa21.24■□□□□ 0.99
SMPD1-210ENST00000534405 HAUS2Q9NVX0 235 aa21.24■□□□□ 0.99
SMPD1-210ENST00000534405 RPS8P62241 208 aaKnown RBP21.23■□□□□ 0.99
SMPD1-210ENST00000534405 ERVK-24P63145 666 aa21.23■□□□□ 0.99
SMPD1-210ENST00000534405 SPDYE1Q8NFV5 336 aaPredicted RBP21.23■□□□□ 0.99
SMPD1-210ENST00000534405 FERMT2Q96AC1 680 aa21.23■□□□□ 0.99
SMPD1-210ENST00000534405 SLC39A2Q9NP94 309 aa21.23■□□□□ 0.99
SMPD1-210ENST00000534405 HDAC6Q9UBN7 1215 aa21.23■□□□□ 0.99
SMPD1-210ENST00000534405 SSBP05455 408 aaKnown RBP eCLIP21.23■□□□□ 0.99
SMPD1-210ENST00000534405 CASP14P31944 242 aa21.23■□□□□ 0.99
SMPD1-210ENST00000534405 ATP1A2P50993 1020 aa21.23■□□□□ 0.99
SMPD1-210ENST00000534405 ATP2C1P98194 919 aaPredicted RBP21.23■□□□□ 0.99
SMPD1-210ENST00000534405 RUFY1Q96T51 708 aa21.23■□□□□ 0.99
SMPD1-210ENST00000534405 SRP68Q9UHB9 627 aaKnown RBP21.23■□□□□ 0.99
SMPD1-210ENST00000534405 ACCSLQ4AC99 568 aa21.22■□□□□ 0.99
SMPD1-210ENST00000534405 SLC51AQ86UW1 340 aa21.22■□□□□ 0.99
SMPD1-210ENST00000534405 SEMA3EO15041 775 aa21.21■□□□□ 0.99
SMPD1-210ENST00000534405 HSF2BPO75031 334 aa21.21■□□□□ 0.99
SMPD1-210ENST00000534405 ATP1A1P05023 1023 aaKnown RBP21.21■□□□□ 0.99
SMPD1-210ENST00000534405 HIBADHP31937 336 aaKnown RBP21.21■□□□□ 0.99
SMPD1-210ENST00000534405 RBM5P52756 815 aaKnown RBP eCLIP21.21■□□□□ 0.99
SMPD1-210ENST00000534405 IL17AQ16552 155 aa21.21■□□□□ 0.99
SMPD1-210ENST00000534405 ANKRD20A8PQ5CZ79 823 aa21.21■□□□□ 0.99
SMPD1-210ENST00000534405 CAPRIN2Q6IMN6 1127 aaKnown RBP21.21■□□□□ 0.99
SMPD1-210ENST00000534405 BARGINQ6ZT62 677 aa21.21■□□□□ 0.99
SMPD1-210ENST00000534405 PIK3AP1Q6ZUJ8 805 aa21.21■□□□□ 0.99
SMPD1-210ENST00000534405 BZW1Q7L1Q6 419 aaKnown RBP21.21■□□□□ 0.99
SMPD1-210ENST00000534405 RPS6KL1Q9Y6S9 549 aa21.21■□□□□ 0.99
SMPD1-210ENST00000534405 XDHP47989 1333 aa21.21■□□□□ 0.99
SMPD1-210ENST00000534405 PPP1R3GB7ZBB8 358 aa21.21■□□□□ 0.99
SMPD1-210ENST00000534405 DNM1LO00429 736 aa21.21■□□□□ 0.99
SMPD1-210ENST00000534405 PES1O00541 588 aaKnown RBP21.21■□□□□ 0.99
SMPD1-210ENST00000534405 GUCY1A3Q02108 690 aa21.21■□□□□ 0.99
SMPD1-210ENST00000534405 NNTQ13423 1086 aa21.21■□□□□ 0.99
SMPD1-210ENST00000534405 SPATA1Q5VX52 437 aa21.21■□□□□ 0.99
SMPD1-210ENST00000534405 MIS18BP1Q6P0N0 1132 aa21.21■□□□□ 0.99
SMPD1-210ENST00000534405 DRAXINQ8NBI3 349 aaPredicted RBP21.21■□□□□ 0.99
SMPD1-210ENST00000534405 CRNKL1Q9BZJ0 848 aaKnown RBP21.21■□□□□ 0.99
SMPD1-210ENST00000534405 TRPC6Q9Y210 931 aa21.21■□□□□ 0.99
SMPD1-210ENST00000534405 SYNRGQ9UMZ2 1314 aa21.21■□□□□ 0.99
SMPD1-210ENST00000534405 COBLO75128 1261 aa21.2■□□□□ 0.99
SMPD1-210ENST00000534405 BMP15O95972 392 aa21.2■□□□□ 0.99
SMPD1-210ENST00000534405 GYPCP04921 128 aa21.2■□□□□ 0.99
SMPD1-210ENST00000534405 SCG2P13521 617 aa21.2■□□□□ 0.99
SMPD1-210ENST00000534405 CCDC70Q6NSX1 233 aa21.2■□□□□ 0.99
SMPD1-210ENST00000534405 CYP26C1Q6V0L0 522 aa21.2■□□□□ 0.99
SMPD1-210ENST00000534405 SH2D3CQ8N5H7 860 aa21.2■□□□□ 0.99
SMPD1-210ENST00000534405 OSBPL7Q9BZF2 842 aa21.2■□□□□ 0.99
SMPD1-210ENST00000534405 ITIH6Q6UXX5 1313 aa21.2■□□□□ 0.98
SMPD1-210ENST00000534405 ENO4A6NNW6 628 aa21.2■□□□□ 0.98
SMPD1-210ENST00000534405 ENC1O14682 589 aa21.2■□□□□ 0.98
SMPD1-210ENST00000534405 SRGAP2O75044 1071 aa21.2■□□□□ 0.98
SMPD1-210ENST00000534405 SMNDC1O75940 238 aaKnown RBP eCLIP21.2■□□□□ 0.98
SMPD1-210ENST00000534405 FXR1P51114 621 aaKnown RBP eCLIP21.2■□□□□ 0.98
SMPD1-210ENST00000534405 TSEN2Q8NCE0 465 aaKnown RBP21.2■□□□□ 0.98
SMPD1-210ENST00000534405 C3orf20Q8ND61 904 aa21.2■□□□□ 0.98
SMPD1-210ENST00000534405 CCDC47Q96A33 483 aaKnown RBP21.2■□□□□ 0.98
SMPD1-210ENST00000534405 MTRQ99707 1265 aa21.2■□□□□ 0.98
SMPD1-210ENST00000534405 BLZF1Q9H2G9 400 aa21.2■□□□□ 0.98
SMPD1-210ENST00000534405 KIAA1551Q9HCM1 1747 aa21.2■□□□□ 0.98
SMPD1-210ENST00000534405 LAMB1P07942 1786 aa21.2■□□□□ 0.98
SMPD1-210ENST00000534405 LACTB2Q53H82 288 aaPredicted RBP21.19■□□□□ 0.98
SMPD1-210ENST00000534405 CDKAL1Q5VV42 579 aa21.19■□□□□ 0.98
SMPD1-210ENST00000534405 IQCEQ6IPM2 695 aa21.19■□□□□ 0.98
SMPD1-210ENST00000534405 EMBQ6PCB8 327 aa21.19■□□□□ 0.98
SMPD1-210ENST00000534405 GSDMAQ96QA5 445 aa21.19■□□□□ 0.98
SMPD1-210ENST00000534405 ADD3Q9UEY8 706 aaKnown RBP21.19■□□□□ 0.98
SMPD1-210ENST00000534405 USP17L8P0C7I0 530 aa21.19■□□□□ 0.98
SMPD1-210ENST00000534405 EPHB4P54760 987 aa21.19■□□□□ 0.98
SMPD1-210ENST00000534405 NLRP5P59047 1200 aa21.19■□□□□ 0.98
SMPD1-210ENST00000534405 SLMAPQ14BN4 828 aa21.19■□□□□ 0.98
SMPD1-210ENST00000534405 PFKFB3Q16875 520 aaPredicted RBP21.19■□□□□ 0.98
SMPD1-210ENST00000534405 TBC1D25Q3MII6 688 aa21.19■□□□□ 0.98
SMPD1-210ENST00000534405 NSMCE1Q8WV22 266 aa21.19■□□□□ 0.98
SMPD1-210ENST00000534405 CAVIN3Q969G5 261 aa21.19■□□□□ 0.98
SMPD1-210ENST00000534405 SPAG5Q96R06 1193 aa21.19■□□□□ 0.98
SMPD1-210ENST00000534405 PAIP2Q9BPZ3 127 aaKnown RBP21.19■□□□□ 0.98
SMPD1-210ENST00000534405 ATP8A2Q9NTI2 1148 aa21.19■□□□□ 0.98
SMPD1-210ENST00000534405 ATP6V1G2O95670 118 aa21.18■□□□□ 0.98
SMPD1-210ENST00000534405 MCM7P33993 719 aa21.18■□□□□ 0.98
SMPD1-210ENST00000534405 MDH1P40925 334 aaKnown RBP21.18■□□□□ 0.98
SMPD1-210ENST00000534405 SEC24CP53992 1094 aa21.18■□□□□ 0.98
SMPD1-210ENST00000534405 SNX1Q13596 522 aa21.18■□□□□ 0.98
SMPD1-210ENST00000534405 MMGT1Q8N4V1 131 aa21.18■□□□□ 0.98
SMPD1-210ENST00000534405 CYFIP2Q96F07 1278 aa21.18■□□□□ 0.98
SMPD1-210ENST00000534405 CAPZA3Q96KX2 299 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms