RNA–Protein interactions for RNA: ENST00000534401.5

PKP3-211, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 756 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-211ENST00000534401 TOB2Q14106 344 aaPredicted RBP24.68■■□□□ 1.54
PKP3-211ENST00000534401 LRRC26Q2I0M4 334 aa24.68■■□□□ 1.54
PKP3-211ENST00000534401 DUSP28Q4G0W2 176 aa24.68■■□□□ 1.54
PKP3-211ENST00000534401 PXMP2Q9NR77 195 aa24.68■■□□□ 1.54
PKP3-211ENST00000534401 CYP46A1Q9Y6A2 500 aa24.68■■□□□ 1.54
PKP3-211ENST00000534401 FRMPD4Q14CM0 1322 aa24.67■■□□□ 1.54
PKP3-211ENST00000534401 GOLGA8AA7E2F4 631 aa24.67■■□□□ 1.54
PKP3-211ENST00000534401 GOLGA8BA8MQT2 603 aa24.67■■□□□ 1.54
PKP3-211ENST00000534401 GCOM1H8Y6P7 765 aaPredicted RBP24.67■■□□□ 1.54
PKP3-211ENST00000534401 PIK3CDO00329 1044 aa24.67■■□□□ 1.54
PKP3-211ENST00000534401 POLR2MP0CAP2 368 aa24.67■■□□□ 1.54
PKP3-211ENST00000534401 TMEM63BQ5T3F8 832 aa24.67■■□□□ 1.54
PKP3-211ENST00000534401 EEPD1Q7L9B9 569 aa24.67■■□□□ 1.54
PKP3-211ENST00000534401 ALDH8A1Q9H2A2 487 aaPredicted RBP24.67■■□□□ 1.54
PKP3-211ENST00000534401 SEC63Q9UGP8 760 aaKnown RBP24.67■■□□□ 1.54
PKP3-211ENST00000534401 NR2E3Q9Y5X4 410 aa24.67■■□□□ 1.54
PKP3-211ENST00000534401 MYADML2A6NDP7 307 aa24.66■■□□□ 1.54
PKP3-211ENST00000534401 EVI5O60447 810 aa24.66■■□□□ 1.54
PKP3-211ENST00000534401 SEC24BO95487 1268 aa24.66■■□□□ 1.54
PKP3-211ENST00000534401 NR3C2P08235 984 aa24.66■■□□□ 1.54
PKP3-211ENST00000534401 IRX5P78411 483 aaPredicted RBP24.66■■□□□ 1.54
PKP3-211ENST00000534401 CCDC62Q6P9F0 684 aa24.66■■□□□ 1.54
PKP3-211ENST00000534401 SLC39A5Q6ZMH5 540 aa24.66■■□□□ 1.54
PKP3-211ENST00000534401 TEX2Q8IWB9 1127 aa24.66■■□□□ 1.54
PKP3-211ENST00000534401 PIBF1Q8WXW3 757 aa24.66■■□□□ 1.54
PKP3-211ENST00000534401 PDCD2LQ9BRP1 358 aa24.66■■□□□ 1.54
PKP3-211ENST00000534401 CCDC196A0A1B0GTZ2 297 aa24.65■■□□□ 1.54
PKP3-211ENST00000534401 MOXD2PA6NHM9 499 aa24.65■■□□□ 1.54
PKP3-211ENST00000534401 H0YGN5 161 aa24.65■■□□□ 1.54
PKP3-211ENST00000534401 MEIS2O14770 477 aa24.65■■□□□ 1.54
PKP3-211ENST00000534401 HOXA13P31271 388 aaPredicted RBP24.65■■□□□ 1.54
PKP3-211ENST00000534401 ADD1P35611 737 aaKnown RBP24.65■■□□□ 1.54
PKP3-211ENST00000534401 FGD1P98174 961 aa24.65■■□□□ 1.54
PKP3-211ENST00000534401 KCNA10Q16322 511 aa24.65■■□□□ 1.54
PKP3-211ENST00000534401 VSIG10LQ86VR7 867 aa24.65■■□□□ 1.54
PKP3-211ENST00000534401 CCDC82Q8N4S0 544 aa24.65■■□□□ 1.54
PKP3-211ENST00000534401 SCFD2Q8WU76 684 aa24.65■■□□□ 1.54
PKP3-211ENST00000534401 WDR11Q9BZH6 1224 aa24.65■■□□□ 1.54
PKP3-211ENST00000534401 PDIA3P30101 505 aaKnown RBP24.64■■□□□ 1.54
PKP3-211ENST00000534401 METAP2P50579 478 aaKnown RBP eCLIP24.64■■□□□ 1.549e-6■□□□□ 8.1
PKP3-211ENST00000534401 ACLYP53396 1101 aa24.64■■□□□ 1.54
PKP3-211ENST00000534401 STXBP2Q15833 593 aa24.64■■□□□ 1.54
PKP3-211ENST00000534401 NTRK3Q16288 839 aa24.64■■□□□ 1.54
PKP3-211ENST00000534401 ARHGEF16Q5VV41 709 aa24.64■■□□□ 1.54
PKP3-211ENST00000534401 PCSK9Q8NBP7 692 aaKnown RBP24.64■■□□□ 1.54
PKP3-211ENST00000534401 SPC25Q9HBM1 224 aa24.64■■□□□ 1.54
PKP3-211ENST00000534401 A0A1W2PQ45 241 aaPredicted RBP24.63■■□□□ 1.53
PKP3-211ENST00000534401 A0A1W2PQY0 241 aa24.63■■□□□ 1.53
PKP3-211ENST00000534401 hCG_1642624A0A1W2PR95 340 aa24.63■■□□□ 1.53
PKP3-211ENST00000534401 NKRFO15226 690 aaKnown RBP eCLIP24.63■■□□□ 1.53
PKP3-211ENST00000534401 EIF3JO75822 258 aaKnown RBP24.63■■□□□ 1.53
PKP3-211ENST00000534401 C6orf222P0C671 652 aaPredicted RBP24.63■■□□□ 1.53
PKP3-211ENST00000534401 C8orf34Q49A92 452 aa24.63■■□□□ 1.53
PKP3-211ENST00000534401 TLK2Q86UE8 772 aa24.63■■□□□ 1.53
PKP3-211ENST00000534401 ZNF274Q96GC6 653 aaPredicted RBP24.63■■□□□ 1.53
PKP3-211ENST00000534401 UPF3BQ9BZI7 483 aaKnown RBP24.63■■□□□ 1.53
PKP3-211ENST00000534401 V9GY48 417 aaPredicted RBP24.63■■□□□ 1.53
PKP3-211ENST00000534401 RGS20O76081 388 aa24.62■■□□□ 1.53
PKP3-211ENST00000534401 EIF2AK2P19525 551 aaKnown RBP24.62■■□□□ 1.53
PKP3-211ENST00000534401 PTGS1P23219 599 aa24.62■■□□□ 1.53
PKP3-211ENST00000534401 PGM5Q15124 567 aa24.62■■□□□ 1.53
PKP3-211ENST00000534401 ELP1O95163 1332 aa24.61■■□□□ 1.53
PKP3-211ENST00000534401 hCG_1984214I3L0E3 225 aa24.61■■□□□ 1.53
PKP3-211ENST00000534401 DYNC1LI2O43237 492 aaPredicted RBP24.61■■□□□ 1.53
PKP3-211ENST00000534401 ARIH2O95376 493 aa24.61■■□□□ 1.53
PKP3-211ENST00000534401 GNASQ5JWF2 1037 aa24.61■■□□□ 1.53
PKP3-211ENST00000534401 WWC2Q6AWC2 1192 aa24.61■■□□□ 1.53
PKP3-211ENST00000534401 TYW1BQ6NUM6 668 aa24.61■■□□□ 1.53
PKP3-211ENST00000534401 ZNF713Q8N859 430 aaPredicted RBP24.61■■□□□ 1.53
PKP3-211ENST00000534401 IL31RAQ8NI17 732 aa24.61■■□□□ 1.53
PKP3-211ENST00000534401 FERMT2Q96AC1 680 aa24.61■■□□□ 1.53
PKP3-211ENST00000534401 ASGR1P07306 291 aa24.6■■□□□ 1.53
PKP3-211ENST00000534401 RTP1P59025 263 aa24.6■■□□□ 1.53
PKP3-211ENST00000534401 TTLL4Q14679 1199 aa24.6■■□□□ 1.53
PKP3-211ENST00000534401 FSCN1Q16658 493 aaKnown RBP24.6■■□□□ 1.53
PKP3-211ENST00000534401 PPP1R18Q6NYC8 613 aa24.6■■□□□ 1.53
PKP3-211ENST00000534401 USP17L6PQ6QN14 398 aa24.6■■□□□ 1.53
PKP3-211ENST00000534401 AP5M1Q9H0R1 490 aa24.6■■□□□ 1.53
PKP3-211ENST00000534401 PRO3102Q9H379 93 aa24.6■■□□□ 1.53
PKP3-211ENST00000534401 PSTPIP2Q9H939 334 aa24.6■■□□□ 1.53
PKP3-211ENST00000534401 PDRG1Q9NUG6 133 aa24.6■■□□□ 1.53
PKP3-211ENST00000534401 PRPF3O43395 683 aaKnown RBP24.59■■□□□ 1.53
PKP3-211ENST00000534401 MYCNP04198 464 aaPredicted RBP24.59■■□□□ 1.53
PKP3-211ENST00000534401 IFNAR1P17181 557 aa24.59■■□□□ 1.53
PKP3-211ENST00000534401 CDK7P50613 346 aa24.59■■□□□ 1.53
PKP3-211ENST00000534401 ATN1P54259 1190 aaPredicted RBP24.59■■□□□ 1.53
PKP3-211ENST00000534401 PKN1Q16512 942 aa24.59■■□□□ 1.53
PKP3-211ENST00000534401 FCHSD1Q86WN1 690 aa24.59■■□□□ 1.53
PKP3-211ENST00000534401 C7orf61Q8IZ16 206 aa24.59■■□□□ 1.53
PKP3-211ENST00000534401 BARHL2Q9NY43 387 aa24.59■■□□□ 1.53
PKP3-211ENST00000534401 PCDH10Q9P2E7 1040 aa24.59■■□□□ 1.53
PKP3-211ENST00000534401 A6NJR5 290 aa24.58■■□□□ 1.53
PKP3-211ENST00000534401 STXBP3O00186 592 aa24.58■■□□□ 1.53
PKP3-211ENST00000534401 TXNP10599 105 aaKnown RBP24.58■■□□□ 1.53
PKP3-211ENST00000534401 MRPS9P82933 396 aaKnown RBP24.58■■□□□ 1.53
PKP3-211ENST00000534401 BEX3Q00994 111 aa24.58■■□□□ 1.53
PKP3-211ENST00000534401 PFKFB3Q16875 520 aaPredicted RBP24.58■■□□□ 1.53
PKP3-211ENST00000534401 NOL8Q76FK4 1167 aaKnown RBP24.58■■□□□ 1.53
PKP3-211ENST00000534401 SLC43A3Q8NBI5 491 aa24.58■■□□□ 1.53
PKP3-211ENST00000534401 GPKOWQ92917 476 aaPredicted RBP eCLIP24.58■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms