RNA–Protein interactions for RNA: ENST00000534374.1

YIF1A-213, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 540 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-213ENST00000534374 TTLL4Q14679 1199 aa27.05■■□□□ 1.92
YIF1A-213ENST00000534374 PPP2R5BQ15173 497 aa27.05■■□□□ 1.92
YIF1A-213ENST00000534374 BRDTQ58F21 947 aaPredicted RBP27.05■■□□□ 1.92
YIF1A-213ENST00000534374 POLR3EQ9NVU0 708 aa27.05■■□□□ 1.92
YIF1A-213ENST00000534374 SLC27A2O14975 620 aa27.04■■□□□ 1.92
YIF1A-213ENST00000534374 PPP1R11O60927 126 aaPredicted RBP27.04■■□□□ 1.92
YIF1A-213ENST00000534374 MCM5P33992 734 aa27.04■■□□□ 1.92
YIF1A-213ENST00000534374 HSD17B4P51659 736 aa27.04■■□□□ 1.92
YIF1A-213ENST00000534374 STXBP2Q15833 593 aa27.04■■□□□ 1.92
YIF1A-213ENST00000534374 SLC35G1Q2M3R5 365 aa27.04■■□□□ 1.92
YIF1A-213ENST00000534374 C9orf50Q5SZB4 431 aa27.04■■□□□ 1.92
YIF1A-213ENST00000534374 CASC1Q6TDU7 716 aa27.04■■□□□ 1.92
YIF1A-213ENST00000534374 DEFB123Q8N688 67 aa27.04■■□□□ 1.92
YIF1A-213ENST00000534374 GRIN2DO15399 1336 aa27.04■■□□□ 1.92
YIF1A-213ENST00000534374 PNMA6FA0A0J9YX94 578 aa27.03■■□□□ 1.92
YIF1A-213ENST00000534374 OPLAHO14841 1288 aa27.03■■□□□ 1.92
YIF1A-213ENST00000534374 KPNA6O60684 536 aa27.03■■□□□ 1.92
YIF1A-213ENST00000534374 CFBP00751 764 aa27.03■■□□□ 1.92
YIF1A-213ENST00000534374 TXNP10599 105 aaKnown RBP27.03■■□□□ 1.92
YIF1A-213ENST00000534374 FPGSQ05932 587 aa27.03■■□□□ 1.92
YIF1A-213ENST00000534374 MFSD5Q6N075 450 aa27.03■■□□□ 1.92
YIF1A-213ENST00000534374 OR6J1Q8NGC5 347 aa27.03■■□□□ 1.92
YIF1A-213ENST00000534374 TMEM87BQ96K49 555 aa27.03■■□□□ 1.92
YIF1A-213ENST00000534374 LY9Q9HBG7 655 aa27.03■■□□□ 1.92
YIF1A-213ENST00000534374 ANO2Q9NQ90 1003 aa27.03■■□□□ 1.92
YIF1A-213ENST00000534374 A6NJR5 290 aa27.02■■□□□ 1.92
YIF1A-213ENST00000534374 CYTH3O43739 400 aa27.02■■□□□ 1.92
YIF1A-213ENST00000534374 SMARCA1P28370 1054 aa27.02■■□□□ 1.92
YIF1A-213ENST00000534374 ARHGEF16Q5VV41 709 aa27.02■■□□□ 1.92
YIF1A-213ENST00000534374 CREB3L3Q68CJ9 461 aa27.02■■□□□ 1.92
YIF1A-213ENST00000534374 FAM109BQ6ICB4 259 aaPredicted RBP27.02■■□□□ 1.92
YIF1A-213ENST00000534374 CCDC62Q6P9F0 684 aa27.02■■□□□ 1.92
YIF1A-213ENST00000534374 PIGSQ96S52 555 aa27.02■■□□□ 1.92
YIF1A-213ENST00000534374 PRC1O43663 620 aa27.01■■□□□ 1.91
YIF1A-213ENST00000534374 EIF3JO75822 258 aaKnown RBP27.01■■□□□ 1.91
YIF1A-213ENST00000534374 DDAH1O94760 285 aa27.01■■□□□ 1.91
YIF1A-213ENST00000534374 PURAQ00577 322 aaKnown RBP27.01■■□□□ 1.91
YIF1A-213ENST00000534374 HOMER1Q86YM7 354 aa27.01■■□□□ 1.91
YIF1A-213ENST00000534374 SLC17A8Q8NDX2 589 aa27.01■■□□□ 1.91
YIF1A-213ENST00000534374 GPHNQ9NQX3 736 aaPredicted RBP27.01■■□□□ 1.91
YIF1A-213ENST00000534374 PXMP2Q9NR77 195 aa27.01■■□□□ 1.91
YIF1A-213ENST00000534374 NR3C2P08235 984 aa27■■□□□ 1.91
YIF1A-213ENST00000534374 KIF5BP33176 963 aa27■■□□□ 1.91
YIF1A-213ENST00000534374 LIFRP42702 1097 aa27■■□□□ 1.91
YIF1A-213ENST00000534374 EPHB4P54760 987 aa27■■□□□ 1.91
YIF1A-213ENST00000534374 SKAP1Q86WV1 359 aa27■■□□□ 1.91
YIF1A-213ENST00000534374 ZNF654Q8IZM8 581 aa27■■□□□ 1.91
YIF1A-213ENST00000534374 MTG1Q9BT17 334 aaPredicted RBP27■■□□□ 1.91
YIF1A-213ENST00000534374 RNF20Q5VTR2 975 aa26.99■■□□□ 1.91
YIF1A-213ENST00000534374 SEPT14Q6ZU15 432 aa26.99■■□□□ 1.91
YIF1A-213ENST00000534374 TMEM199Q8N511 208 aa26.99■■□□□ 1.91
YIF1A-213ENST00000534374 CTCFLQ8NI51 663 aaPredicted RBP26.99■■□□□ 1.91
YIF1A-213ENST00000534374 COPS5Q92905 334 aa26.99■■□□□ 1.91
YIF1A-213ENST00000534374 LZTS2Q9BRK4 669 aa26.99■■□□□ 1.91
YIF1A-213ENST00000534374 SH2B2O14492 632 aaPredicted RBP26.98■■□□□ 1.91
YIF1A-213ENST00000534374 ARIH2O95376 493 aa26.98■■□□□ 1.91
YIF1A-213ENST00000534374 MYL3P08590 195 aa26.98■■□□□ 1.91
YIF1A-213ENST00000534374 EIF2AK2P19525 551 aaKnown RBP26.98■■□□□ 1.91
YIF1A-213ENST00000534374 GNAQP50148 359 aa26.98■■□□□ 1.91
YIF1A-213ENST00000534374 PSMC6P62333 389 aa26.98■■□□□ 1.91
YIF1A-213ENST00000534374 PPIGQ13427 754 aaKnown RBP eCLIP26.98■■□□□ 1.91
YIF1A-213ENST00000534374 SPZ1Q9BXG8 430 aa26.98■■□□□ 1.91
YIF1A-213ENST00000534374 STXBP5LQ9Y2K9 1186 aa26.98■■□□□ 1.91
YIF1A-213ENST00000534374 GCOM1H8Y6P7 765 aaPredicted RBP26.97■■□□□ 1.91
YIF1A-213ENST00000534374 POLR2MP0CAP2 368 aa26.97■■□□□ 1.91
YIF1A-213ENST00000534374 MTMR10Q9NXD2 777 aa26.97■■□□□ 1.91
YIF1A-213ENST00000534374 CCDC69A6NI79 296 aa26.96■■□□□ 1.91
YIF1A-213ENST00000534374 GH1P01241 217 aa26.96■■□□□ 1.91
YIF1A-213ENST00000534374 SUPT20HL2P0C7V6 817 aa26.96■■□□□ 1.91
YIF1A-213ENST00000534374 CALM1P0DP23 149 aa26.96■■□□□ 1.91
YIF1A-213ENST00000534374 CALM2P0DP24 149 aa26.96■■□□□ 1.91
YIF1A-213ENST00000534374 CALM3P0DP25 149 aa26.96■■□□□ 1.91
YIF1A-213ENST00000534374 SMAD3P84022 425 aaKnown RBP26.96■■□□□ 1.91
YIF1A-213ENST00000534374 NFXL1Q6ZNB6 911 aa26.96■■□□□ 1.91
YIF1A-213ENST00000534374 Q7L0L9 218 aa26.96■■□□□ 1.91
YIF1A-213ENST00000534374 VSIG10LQ86VR7 867 aa26.96■■□□□ 1.91
YIF1A-213ENST00000534374 CCDC136Q96JN2 1154 aa26.96■■□□□ 1.91
YIF1A-213ENST00000534374 PDCD2LQ9BRP1 358 aa26.96■■□□□ 1.91
YIF1A-213ENST00000534374 TRPV6Q9H1D0 765 aa26.96■■□□□ 1.91
YIF1A-213ENST00000534374 ALDH8A1Q9H2A2 487 aaPredicted RBP26.96■■□□□ 1.91
YIF1A-213ENST00000534374 DDX41Q9UJV9 622 aaKnown RBP26.96■■□□□ 1.91
YIF1A-213ENST00000534374 KIAA1217Q5T5P2 1943 aa26.96■■□□□ 1.91
YIF1A-213ENST00000534374 B4GALT4O60513 344 aa26.95■■□□□ 1.9
YIF1A-213ENST00000534374 CDC45O75419 566 aa26.95■■□□□ 1.9
YIF1A-213ENST00000534374 HOXA13P31271 388 aaPredicted RBP26.95■■□□□ 1.9
YIF1A-213ENST00000534374 LY6KQ17RY6 165 aa26.95■■□□□ 1.9
YIF1A-213ENST00000534374 TSGA10IPQ3SY00 556 aa26.95■■□□□ 1.9
YIF1A-213ENST00000534374 RNPC3Q96LT9 517 aaKnown RBP26.95■■□□□ 1.9
YIF1A-213ENST00000534374 SCN10AQ9Y5Y9 1956 aa26.95■■□□□ 1.9
YIF1A-213ENST00000534374 COL6A3P12111 3177 aa26.95■■□□□ 1.9
YIF1A-213ENST00000534374 NFRKBQ6P4R8 1299 aa26.94■■□□□ 1.9
YIF1A-213ENST00000534374 KCNV1Q6PIU1 500 aa26.94■■□□□ 1.9
YIF1A-213ENST00000534374 EMID1Q96A84 441 aaPredicted RBP26.94■■□□□ 1.9
YIF1A-213ENST00000534374 RRP36Q96EU6 259 aaKnown RBP26.94■■□□□ 1.9
YIF1A-213ENST00000534374 MYL10Q9BUA6 226 aa26.94■■□□□ 1.9
YIF1A-213ENST00000534374 PPP1R12CQ9BZL4 782 aa26.94■■□□□ 1.9
YIF1A-213ENST00000534374 HIPK3Q9H422 1215 aa26.94■■□□□ 1.9
YIF1A-213ENST00000534374 CSF2RAP15509 400 aa26.93■■□□□ 1.9
YIF1A-213ENST00000534374 CYP2C18P33260 490 aa26.93■■□□□ 1.9
YIF1A-213ENST00000534374 PTPN11Q06124 597 aaPredicted RBP26.93■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms