RNA–Protein interactions for RNA: ENST00000534208.5

NDUFS3-212, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 4 BASIC

Gene NDUFS3, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-212ENST00000534208 HERVK_113Q902F9 699 aa23.06■■□□□ 1.28
NDUFS3-212ENST00000534208 TBC1D5Q92609 795 aa23.06■■□□□ 1.28
NDUFS3-212ENST00000534208 MTG1Q9BT17 334 aaPredicted RBP23.06■■□□□ 1.28
NDUFS3-212ENST00000534208 MRPL11Q9Y3B7 192 aaKnown RBP23.06■■□□□ 1.28
NDUFS3-212ENST00000534208 UMODL1Q5DID0 1318 aa23.06■■□□□ 1.28
NDUFS3-212ENST00000534208 MYL3P08590 195 aa23.05■■□□□ 1.28
NDUFS3-212ENST00000534208 SUPT20HL2P0C7V6 817 aa23.05■■□□□ 1.28
NDUFS3-212ENST00000534208 TXNP10599 105 aaKnown RBP23.05■■□□□ 1.28
NDUFS3-212ENST00000534208 MYLIPQ8WY64 445 aa23.05■■□□□ 1.28
NDUFS3-212ENST00000534208 IWS1Q96ST2 819 aa23.05■■□□□ 1.28
NDUFS3-212ENST00000534208 GPHNQ9NQX3 736 aaPredicted RBP23.05■■□□□ 1.28
NDUFS3-212ENST00000534208 EYSQ5T1H1 3165 aa23.05■■□□□ 1.28
NDUFS3-212ENST00000534208 CHD9Q3L8U1 2897 aa23.04■■□□□ 1.28
NDUFS3-212ENST00000534208 DHX16O60231 1041 aaKnown RBP23.04■■□□□ 1.28
NDUFS3-212ENST00000534208 CHMLP26374 656 aa23.04■■□□□ 1.28
NDUFS3-212ENST00000534208 CCDC62Q6P9F0 684 aa23.04■■□□□ 1.28
NDUFS3-212ENST00000534208 CYB5R4Q7L1T6 521 aa23.04■■□□□ 1.28
NDUFS3-212ENST00000534208 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.04■■□□□ 1.28
NDUFS3-212ENST00000534208 MAFAQ8NHW3 353 aaPredicted RBP23.04■■□□□ 1.28
NDUFS3-212ENST00000534208 TAAR1Q96RJ0 339 aa23.04■■□□□ 1.28
NDUFS3-212ENST00000534208 WNT8AQ9H1J5 351 aa23.04■■□□□ 1.28
NDUFS3-212ENST00000534208 COL20A1Q9P218 1284 aa23.04■■□□□ 1.28
NDUFS3-212ENST00000534208 U3KPZ7 1027 aaPredicted RBP23.04■■□□□ 1.28
NDUFS3-212ENST00000534208 ARIH2O95376 493 aa23.03■■□□□ 1.28
NDUFS3-212ENST00000534208 FGBP02675 491 aa23.03■■□□□ 1.28
NDUFS3-212ENST00000534208 GHRHRQ02643 423 aa23.03■■□□□ 1.28
NDUFS3-212ENST00000534208 TRDNQ13061 729 aa23.03■■□□□ 1.28
NDUFS3-212ENST00000534208 STAG2Q8N3U4 1231 aa23.03■■□□□ 1.28
NDUFS3-212ENST00000534208 COPS5Q92905 334 aa23.03■■□□□ 1.28
NDUFS3-212ENST00000534208 TIFAQ96CG3 184 aa23.03■■□□□ 1.28
NDUFS3-212ENST00000534208 MTMR8Q96EF0 704 aa23.03■■□□□ 1.28
NDUFS3-212ENST00000534208 RMDN3Q96TC7 470 aa23.03■■□□□ 1.28
NDUFS3-212ENST00000534208 AMNQ9BXJ7 453 aa23.03■■□□□ 1.28
NDUFS3-212ENST00000534208 MTIF3Q9H2K0 278 aaKnown RBP23.03■■□□□ 1.28
NDUFS3-212ENST00000534208 ZNF576Q9H609 170 aa23.03■■□□□ 1.28
NDUFS3-212ENST00000534208 VAT1LQ9HCJ6 419 aa23.03■■□□□ 1.28
NDUFS3-212ENST00000534208 TRMT13Q9NUP7 481 aaKnown RBP23.03■■□□□ 1.28
NDUFS3-212ENST00000534208 KLRF2D3W0D1 207 aa23.02■■□□□ 1.28
NDUFS3-212ENST00000534208 CYP21A2P08686 494 aa23.02■■□□□ 1.28
NDUFS3-212ENST00000534208 FOSL2P15408 326 aa23.02■■□□□ 1.28
NDUFS3-212ENST00000534208 CCL23P55773 120 aa23.02■■□□□ 1.28
NDUFS3-212ENST00000534208 NBPF20Q3BBV1 942 aa23.02■■□□□ 1.28
NDUFS3-212ENST00000534208 NFRKBQ6P4R8 1299 aa23.02■■□□□ 1.28
NDUFS3-212ENST00000534208 PBX4Q9BYU1 374 aa23.02■■□□□ 1.28
NDUFS3-212ENST00000534208 MAD2L2Q9UI95 211 aa23.02■■□□□ 1.28
NDUFS3-212ENST00000534208 PRUNE2Q8WUY3 3088 aa23.01■■□□□ 1.27
NDUFS3-212ENST00000534208 PALM3A6NDB9 673 aaPredicted RBP23.01■■□□□ 1.27
NDUFS3-212ENST00000534208 PTH1RQ03431 593 aa23.01■■□□□ 1.27
NDUFS3-212ENST00000534208 PTPN11Q06124 597 aaPredicted RBP23.01■■□□□ 1.27
NDUFS3-212ENST00000534208 GRIN2CQ14957 1233 aa23.01■■□□□ 1.27
NDUFS3-212ENST00000534208 STXBP2Q15833 593 aa23.01■■□□□ 1.27
NDUFS3-212ENST00000534208 RPUSD2Q8IZ73 545 aaKnown RBP23.01■■□□□ 1.27
NDUFS3-212ENST00000534208 CXXC1Q9P0U4 656 aaPredicted RBP23.01■■□□□ 1.27
NDUFS3-212ENST00000534208 KIAA1217Q5T5P2 1943 aa23.01■■□□□ 1.27
NDUFS3-212ENST00000534208 GRXCR1A8MXD5 290 aa23■■□□□ 1.27
NDUFS3-212ENST00000534208 OPLAHO14841 1288 aa23■■□□□ 1.27
NDUFS3-212ENST00000534208 ZBTB5O15062 677 aa23■■□□□ 1.27
NDUFS3-212ENST00000534208 HSD17B4P51659 736 aa23■■□□□ 1.27
NDUFS3-212ENST00000534208 VWCEQ96DN2 955 aa23■■□□□ 1.27
NDUFS3-212ENST00000534208 MAP3K20Q9NYL2 800 aaKnown RBP23■■□□□ 1.27
NDUFS3-212ENST00000534208 SGSM2O43147 1006 aa22.99■■□□□ 1.27
NDUFS3-212ENST00000534208 GH1P01241 217 aa22.99■■□□□ 1.27
NDUFS3-212ENST00000534208 CYP2C9P11712 490 aa22.99■■□□□ 1.27
NDUFS3-212ENST00000534208 PBX2P40425 430 aa22.99■■□□□ 1.27
NDUFS3-212ENST00000534208 ARHGAP1Q07960 439 aa22.99■■□□□ 1.27
NDUFS3-212ENST00000534208 GRM4Q14833 912 aa22.99■■□□□ 1.27
NDUFS3-212ENST00000534208 RAB30Q15771 203 aa22.99■■□□□ 1.27
NDUFS3-212ENST00000534208 ARHGEF16Q5VV41 709 aa22.99■■□□□ 1.27
NDUFS3-212ENST00000534208 SEPT14Q6ZU15 432 aa22.99■■□□□ 1.27
NDUFS3-212ENST00000534208 SAMD3Q8N6K7 520 aa22.99■■□□□ 1.27
NDUFS3-212ENST00000534208 PXMP2Q9NR77 195 aa22.99■■□□□ 1.27
NDUFS3-212ENST00000534208 PPP1R11O60927 126 aaPredicted RBP22.98■■□□□ 1.27
NDUFS3-212ENST00000534208 EIF3JO75822 258 aaKnown RBP22.98■■□□□ 1.27
NDUFS3-212ENST00000534208 CFBP00751 764 aa22.98■■□□□ 1.27
NDUFS3-212ENST00000534208 PFKMP08237 780 aa22.98■■□□□ 1.27
NDUFS3-212ENST00000534208 LY6KQ17RY6 165 aa22.98■■□□□ 1.27
NDUFS3-212ENST00000534208 FAM47CQ5HY64 1035 aa22.98■■□□□ 1.27
NDUFS3-212ENST00000534208 OTOP2Q7RTS6 562 aa22.98■■□□□ 1.27
NDUFS3-212ENST00000534208 AFG1LQ8WV93 481 aa22.98■■□□□ 1.27
NDUFS3-212ENST00000534208 SCLYQ96I15 445 aa22.98■■□□□ 1.27
NDUFS3-212ENST00000534208 PCDHA1Q9Y5I3 950 aa22.98■■□□□ 1.27
NDUFS3-212ENST00000534208 ERICH2A1L162 156 aa22.97■■□□□ 1.27
NDUFS3-212ENST00000534208 PITPNM1O00562 1244 aa22.97■■□□□ 1.27
NDUFS3-212ENST00000534208 IFIT3O14879 490 aaKnown RBP22.97■■□□□ 1.27
NDUFS3-212ENST00000534208 NR3C2P08235 984 aa22.97■■□□□ 1.27
NDUFS3-212ENST00000534208 MMP3P08254 477 aa22.97■■□□□ 1.27
NDUFS3-212ENST00000534208 EIF2AK2P19525 551 aaKnown RBP22.97■■□□□ 1.27
NDUFS3-212ENST00000534208 TRAF1Q13077 416 aa22.97■■□□□ 1.27
NDUFS3-212ENST00000534208 SLC35G1Q2M3R5 365 aa22.97■■□□□ 1.27
NDUFS3-212ENST00000534208 RALYLQ86SE5 291 aaKnown RBP22.97■■□□□ 1.27
NDUFS3-212ENST00000534208 NCOA7Q8NI08 942 aa22.97■■□□□ 1.27
NDUFS3-212ENST00000534208 EMID1Q96A84 441 aaPredicted RBP22.97■■□□□ 1.27
NDUFS3-212ENST00000534208 RIOX1Q9H6W3 641 aa22.97■■□□□ 1.27
NDUFS3-212ENST00000534208 MSRAQ9UJ68 235 aa22.97■■□□□ 1.27
NDUFS3-212ENST00000534208 DDX41Q9UJV9 622 aaKnown RBP22.97■■□□□ 1.27
NDUFS3-212ENST00000534208 E7EWF7 191 aa22.96■■□□□ 1.27
NDUFS3-212ENST00000534208 TROAPQ12815 778 aa22.96■■□□□ 1.27
NDUFS3-212ENST00000534208 SART3Q15020 963 aaKnown RBP22.96■■□□□ 1.27
NDUFS3-212ENST00000534208 STOX1Q6ZVD7 989 aa22.96■■□□□ 1.27
NDUFS3-212ENST00000534208 MAP4K1Q92918 833 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms