RNA–Protein interactions for RNA: ENST00000534091.1

LDLRAD3-206, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 4

Gene LDLRAD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-206ENST00000534091 VWA5AO00534 786 aa11.49□□□□□ -0.57
LDLRAD3-206ENST00000534091 SPTLC2O15270 562 aa11.49□□□□□ -0.57
LDLRAD3-206ENST00000534091 INHAP05111 366 aa11.49□□□□□ -0.57
LDLRAD3-206ENST00000534091 CCL5P13501 91 aa11.49□□□□□ -0.57
LDLRAD3-206ENST00000534091 TOB1P50616 345 aaPredicted RBP11.49□□□□□ -0.57
LDLRAD3-206ENST00000534091 STAT2P52630 851 aa11.49□□□□□ -0.57
LDLRAD3-206ENST00000534091 TRAF1Q13077 416 aa11.49□□□□□ -0.57
LDLRAD3-206ENST00000534091 SF3A1Q15459 793 aaKnown RBP11.49□□□□□ -0.57
LDLRAD3-206ENST00000534091 CDC37Q16543 378 aaPredicted RBP11.49□□□□□ -0.57
LDLRAD3-206ENST00000534091 QRICH1Q2TAL8 776 aa11.49□□□□□ -0.57
LDLRAD3-206ENST00000534091 KIAA1755Q5JYT7 1200 aa11.49□□□□□ -0.57
LDLRAD3-206ENST00000534091 ADALQ6DHV7 355 aa11.49□□□□□ -0.57
LDLRAD3-206ENST00000534091 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.49□□□□□ -0.57
LDLRAD3-206ENST00000534091 RIOX2Q8IUF8 465 aa11.49□□□□□ -0.57
LDLRAD3-206ENST00000534091 SPICE1Q8N0Z3 855 aa11.49□□□□□ -0.57
LDLRAD3-206ENST00000534091 CHURC1Q8WUH1 139 aa11.49□□□□□ -0.57
LDLRAD3-206ENST00000534091 PIBF1Q8WXW3 757 aa11.49□□□□□ -0.57
LDLRAD3-206ENST00000534091 SLF1Q9BQI6 1058 aa11.49□□□□□ -0.57
LDLRAD3-206ENST00000534091 MOV10L1Q9BXT6 1211 aaKnown RBP11.49□□□□□ -0.57
LDLRAD3-206ENST00000534091 FTOQ9C0B1 505 aaKnown RBP eCLIP11.49□□□□□ -0.57
LDLRAD3-206ENST00000534091 RNF208Q9H0X6 261 aa11.49□□□□□ -0.57
LDLRAD3-206ENST00000534091 PORCNQ9H237 461 aa11.49□□□□□ -0.57
LDLRAD3-206ENST00000534091 PAK6Q9NQU5 681 aaPredicted RBP11.49□□□□□ -0.57
LDLRAD3-206ENST00000534091 PNMA2Q9UL42 364 aa11.49□□□□□ -0.57
LDLRAD3-206ENST00000534091 CEP131Q9UPN4 1083 aa11.49□□□□□ -0.57
LDLRAD3-206ENST00000534091 CLIC4Q9Y696 253 aa11.49□□□□□ -0.57
LDLRAD3-206ENST00000534091 RPTORQ8N122 1335 aa11.49□□□□□ -0.57
LDLRAD3-206ENST00000534091 COL11A1P12107 1806 aaPredicted RBP11.49□□□□□ -0.57
LDLRAD3-206ENST00000534091 POTEFA5A3E0 1075 aa11.48□□□□□ -0.57
LDLRAD3-206ENST00000534091 GOLGA6L4A6NEF3 574 aa11.48□□□□□ -0.57
LDLRAD3-206ENST00000534091 SMCO2A6NFE2 343 aa11.48□□□□□ -0.57
LDLRAD3-206ENST00000534091 TMEM232C9JQI7 657 aa11.48□□□□□ -0.57
LDLRAD3-206ENST00000534091 SLC34A2O95436 690 aa11.48□□□□□ -0.57
LDLRAD3-206ENST00000534091 ORC2Q13416 577 aaPredicted RBP11.48□□□□□ -0.57
LDLRAD3-206ENST00000534091 FAM83BQ5T0W9 1011 aa11.48□□□□□ -0.57
LDLRAD3-206ENST00000534091 MAP3K21Q5TCX8 1036 aa11.48□□□□□ -0.57
LDLRAD3-206ENST00000534091 KRT25Q7Z3Z0 450 aa11.48□□□□□ -0.57
LDLRAD3-206ENST00000534091 ANKLE1Q8NAG6 615 aa11.48□□□□□ -0.57
LDLRAD3-206ENST00000534091 ATG4CQ96DT6 458 aa11.48□□□□□ -0.57
LDLRAD3-206ENST00000534091 TEX13BQ9BXU2 312 aa11.48□□□□□ -0.57
LDLRAD3-206ENST00000534091 VAT1LQ9HCJ6 419 aa11.48□□□□□ -0.57
LDLRAD3-206ENST00000534091 HMX1Q9NP08 348 aaPredicted RBP11.48□□□□□ -0.57
LDLRAD3-206ENST00000534091 TMEM63CQ9P1W3 806 aa11.48□□□□□ -0.57
LDLRAD3-206ENST00000534091 PCDHA7Q9UN72 937 aa11.48□□□□□ -0.57
LDLRAD3-206ENST00000534091 PCDHA6Q9UN73 950 aa11.48□□□□□ -0.57
LDLRAD3-206ENST00000534091 DIS3Q9Y2L1 958 aaKnown RBP11.48□□□□□ -0.57
LDLRAD3-206ENST00000534091 PCDHA8Q9Y5H6 950 aa11.48□□□□□ -0.57
LDLRAD3-206ENST00000534091 HTTP42858 3142 aa11.47□□□□□ -0.57
LDLRAD3-206ENST00000534091 ZNFX1Q9P2E3 1918 aaKnown RBP11.47□□□□□ -0.57
LDLRAD3-206ENST00000534091 CCDC194A0A1B0GVG4 234 aa11.47□□□□□ -0.57
LDLRAD3-206ENST00000534091 RAD21O60216 631 aa11.47□□□□□ -0.57
LDLRAD3-206ENST00000534091 MSCO60682 206 aa11.47□□□□□ -0.57
LDLRAD3-206ENST00000534091 PPP1R11O60927 126 aaPredicted RBP11.47□□□□□ -0.57
LDLRAD3-206ENST00000534091 ZBED4O75132 1171 aa11.47□□□□□ -0.57
LDLRAD3-206ENST00000534091 SGPL1O95470 568 aa11.47□□□□□ -0.57
LDLRAD3-206ENST00000534091 FCER1AP12319 257 aa11.47□□□□□ -0.57
LDLRAD3-206ENST00000534091 ERCC3P19447 782 aa11.47□□□□□ -0.57
LDLRAD3-206ENST00000534091 SLC16A2P36021 539 aa11.47□□□□□ -0.57
LDLRAD3-206ENST00000534091 STAT3P40763 770 aa11.47□□□□□ -0.57
LDLRAD3-206ENST00000534091 ADCY7P51828 1080 aa11.47□□□□□ -0.57
LDLRAD3-206ENST00000534091 ZNF445P59923 1031 aa11.47□□□□□ -0.57
LDLRAD3-206ENST00000534091 CEBPZQ03701 1054 aaKnown RBP11.47□□□□□ -0.57
LDLRAD3-206ENST00000534091 EARS2Q5JPH6 523 aaKnown RBP11.47□□□□□ -0.57
LDLRAD3-206ENST00000534091 AXDND1Q5T1B0 1012 aaPredicted RBP11.47□□□□□ -0.57
LDLRAD3-206ENST00000534091 CCDC183Q5T5S1 534 aa11.47□□□□□ -0.57
LDLRAD3-206ENST00000534091 MFSD14CQ5VZR4 134 aa11.47□□□□□ -0.57
LDLRAD3-206ENST00000534091 OLFML2BQ68BL8 750 aa11.47□□□□□ -0.57
LDLRAD3-206ENST00000534091 CAVIN1Q6NZI2 390 aaKnown RBP11.47□□□□□ -0.57
LDLRAD3-206ENST00000534091 MSL3Q8N5Y2 521 aaKnown RBP11.47□□□□□ -0.57
LDLRAD3-206ENST00000534091 REPS2Q8NFH8 660 aa11.47□□□□□ -0.57
LDLRAD3-206ENST00000534091 NUP88Q99567 741 aaPredicted RBP11.47□□□□□ -0.57
LDLRAD3-206ENST00000534091 AMNQ9BXJ7 453 aa11.47□□□□□ -0.57
LDLRAD3-206ENST00000534091 MAF1Q9H063 256 aa11.47□□□□□ -0.57
LDLRAD3-206ENST00000534091 RANBP17Q9H2T7 1088 aaKnown RBP11.47□□□□□ -0.57
LDLRAD3-206ENST00000534091 RIC8AQ9NPQ8 531 aa11.47□□□□□ -0.57
LDLRAD3-206ENST00000534091 FBXO40Q9UH90 709 aa11.47□□□□□ -0.57
LDLRAD3-206ENST00000534091 NRBP1Q9UHY1 535 aa11.47□□□□□ -0.57
LDLRAD3-206ENST00000534091 ZNF214Q9UL59 606 aaPredicted RBP11.47□□□□□ -0.57
LDLRAD3-206ENST00000534091 PRR12Q9ULL5 1215 aa11.47□□□□□ -0.57
LDLRAD3-206ENST00000534091 ISY1Q9ULR0 285 aaKnown RBP11.47□□□□□ -0.57
LDLRAD3-206ENST00000534091 FAM237AA0A1B0GTK4 181 aa11.46□□□□□ -0.57
LDLRAD3-206ENST00000534091 IGHA2P01877 340 aa11.46□□□□□ -0.57
LDLRAD3-206ENST00000534091 ELNP15502 786 aa11.46□□□□□ -0.57
LDLRAD3-206ENST00000534091 CYP2B6P20813 491 aa11.46□□□□□ -0.57
LDLRAD3-206ENST00000534091 ME1P48163 572 aa11.46□□□□□ -0.57
LDLRAD3-206ENST00000534091 CLK2P49760 499 aaKnown RBP11.46□□□□□ -0.57
LDLRAD3-206ENST00000534091 MRPL12P52815 198 aaKnown RBP11.46□□□□□ -0.57
LDLRAD3-206ENST00000534091 TMEM132BQ14DG7 1078 aa11.46□□□□□ -0.57
LDLRAD3-206ENST00000534091 MTFR1Q15390 333 aa11.46□□□□□ -0.57
LDLRAD3-206ENST00000534091 TKFCQ3LXA3 575 aa11.46□□□□□ -0.57
LDLRAD3-206ENST00000534091 TTC38Q5R3I4 469 aa11.46□□□□□ -0.57
LDLRAD3-206ENST00000534091 MCTP2Q6DN12 878 aa11.46□□□□□ -0.57
LDLRAD3-206ENST00000534091 PIK3AP1Q6ZUJ8 805 aa11.46□□□□□ -0.57
LDLRAD3-206ENST00000534091 REXO1Q8N1G1 1221 aaKnown RBP11.46□□□□□ -0.57
LDLRAD3-206ENST00000534091 U2AF1L4Q8WU68 220 aaKnown RBP11.46□□□□□ -0.57
LDLRAD3-206ENST00000534091 TRIB2Q92519 343 aa11.46□□□□□ -0.57
LDLRAD3-206ENST00000534091 CUL5Q93034 780 aa11.46□□□□□ -0.57
LDLRAD3-206ENST00000534091 CRISPLD2Q9H0B8 497 aa11.46□□□□□ -0.57
LDLRAD3-206ENST00000534091 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.46□□□□□ -0.57
LDLRAD3-206ENST00000534091 UNC93B1Q9H1C4 597 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms