RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 BRDTQ58F21 947 aaPredicted RBP12.77□□□□□ -0.37
CSDE1-215ENST00000533818 ASTLQ6HA08 431 aaPredicted RBP12.77□□□□□ -0.37
CSDE1-215ENST00000533818 CHAMP1Q96JM3 812 aa12.77□□□□□ -0.37
CSDE1-215ENST00000533818 CLEC1BQ9P126 229 aa12.77□□□□□ -0.37
CSDE1-215ENST00000533818 SWAP70Q9UH65 585 aa12.77□□□□□ -0.37
CSDE1-215ENST00000533818 COG6Q9Y2V7 657 aa12.77□□□□□ -0.37
CSDE1-215ENST00000533818 SPTBN2O15020 2390 aa12.77□□□□□ -0.37
CSDE1-215ENST00000533818 FASNP49327 2511 aaKnown RBP12.76□□□□□ -0.37
CSDE1-215ENST00000533818 RBAK-RBAKDNI3L0D1 243 aa12.76□□□□□ -0.37
CSDE1-215ENST00000533818 GRM6O15303 877 aa12.76□□□□□ -0.37
CSDE1-215ENST00000533818 KPNA6O60684 536 aa12.76□□□□□ -0.37
CSDE1-215ENST00000533818 CKBP12277 381 aa12.76□□□□□ -0.37
CSDE1-215ENST00000533818 COASYQ13057 564 aa12.76□□□□□ -0.37
CSDE1-215ENST00000533818 RSPO4Q2I0M5 234 aaPredicted RBP12.76□□□□□ -0.37
CSDE1-215ENST00000533818 MRPL50Q8N5N7 158 aaKnown RBP12.76□□□□□ -0.37
CSDE1-215ENST00000533818 DYNLL2Q96FJ2 89 aa12.76□□□□□ -0.37
CSDE1-215ENST00000533818 CCDC17Q96LX7 622 aa12.76□□□□□ -0.37
CSDE1-215ENST00000533818 HINFPQ9BQA5 517 aa12.76□□□□□ -0.37
CSDE1-215ENST00000533818 SEMA4AQ9H3S1 761 aa12.76□□□□□ -0.37
CSDE1-215ENST00000533818 KANSL2Q9H9L4 492 aa12.76□□□□□ -0.37
CSDE1-215ENST00000533818 VTA1Q9NP79 307 aa12.76□□□□□ -0.37
CSDE1-215ENST00000533818 HDAC5Q9UQL6 1122 aa12.76□□□□□ -0.37
CSDE1-215ENST00000533818 CSPG5O95196 566 aa12.75□□□□□ -0.37
CSDE1-215ENST00000533818 RB1P06400 928 aa12.75□□□□□ -0.37
CSDE1-215ENST00000533818 CYP2D6P10635 497 aa12.75□□□□□ -0.37
CSDE1-215ENST00000533818 CTNNB1P35222 781 aa12.75□□□□□ -0.37
CSDE1-215ENST00000533818 CCDC158Q5M9N0 1113 aa12.75□□□□□ -0.37
CSDE1-215ENST00000533818 OR6J1Q8NGC5 347 aa12.75□□□□□ -0.37
CSDE1-215ENST00000533818 DHX38Q92620 1227 aaKnown RBP12.75□□□□□ -0.37
CSDE1-215ENST00000533818 KIFC2Q96AC6 838 aa12.75□□□□□ -0.37
CSDE1-215ENST00000533818 CTAGE1Q96RT6 745 aa12.75□□□□□ -0.37
CSDE1-215ENST00000533818 C11orf84Q9BUA3 381 aaPredicted RBP12.75□□□□□ -0.37
CSDE1-215ENST00000533818 WDR11Q9BZH6 1224 aa12.75□□□□□ -0.37
CSDE1-215ENST00000533818 A1CFQ9NQ94 594 aaKnown RBP12.75□□□□□ -0.37
CSDE1-215ENST00000533818 SALL2Q9Y467 1007 aaPredicted RBP12.75□□□□□ -0.37
CSDE1-215ENST00000533818 LGR5O75473 907 aa12.74□□□□□ -0.37
CSDE1-215ENST00000533818 UPP2O95045 317 aa12.74□□□□□ -0.37
CSDE1-215ENST00000533818 CLCN5P51795 746 aa12.74□□□□□ -0.37
CSDE1-215ENST00000533818 RBL2Q08999 1139 aa12.74□□□□□ -0.37
CSDE1-215ENST00000533818 GDF6Q6KF10 455 aaPredicted RBP12.74□□□□□ -0.37
CSDE1-215ENST00000533818 KREMEN2Q8NCW0 462 aa12.74□□□□□ -0.37
CSDE1-215ENST00000533818 PPP2R3CQ969Q6 453 aa12.74□□□□□ -0.37
CSDE1-215ENST00000533818 ACAD9Q9H845 621 aa12.74□□□□□ -0.37
CSDE1-215ENST00000533818 SLC38A10Q9HBR0 1119 aa12.74□□□□□ -0.37
CSDE1-215ENST00000533818 C5orf67F2Z3F1 127 aa12.73□□□□□ -0.37
CSDE1-215ENST00000533818 SRGAP3O43295 1099 aa12.73□□□□□ -0.37
CSDE1-215ENST00000533818 HOXB3P14651 431 aaPredicted RBP12.73□□□□□ -0.37
CSDE1-215ENST00000533818 ATF7P17544 494 aaPredicted RBP12.73□□□□□ -0.37
CSDE1-215ENST00000533818 BMPR1AP36894 532 aa12.73□□□□□ -0.37
CSDE1-215ENST00000533818 OAZ1P54368 228 aa12.73□□□□□ -0.37
CSDE1-215ENST00000533818 KIAA0319Q5VV43 1072 aa12.73□□□□□ -0.37
CSDE1-215ENST00000533818 UBALD2Q8IYN6 164 aa12.73□□□□□ -0.37
CSDE1-215ENST00000533818 EFHBQ8N7U6 833 aa12.73□□□□□ -0.37
CSDE1-215ENST00000533818 DBF4BQ8NFT6 615 aa12.73□□□□□ -0.37
CSDE1-215ENST00000533818 TOP1MTQ969P6 601 aa12.73□□□□□ -0.37
CSDE1-215ENST00000533818 RIOK1Q9BRS2 568 aaKnown RBP12.73□□□□□ -0.37
CSDE1-215ENST00000533818 CRNKL1Q9BZJ0 848 aaKnown RBP12.73□□□□□ -0.37
CSDE1-215ENST00000533818 MFSD1Q9H3U5 465 aa12.73□□□□□ -0.37
CSDE1-215ENST00000533818 SH2B1Q9NRF2 756 aaPredicted RBP12.73□□□□□ -0.37
CSDE1-215ENST00000533818 FAM208BQ5VWN6 2430 aa12.73□□□□□ -0.37
CSDE1-215ENST00000533818 SETXQ7Z333 2677 aaKnown RBP12.72□□□□□ -0.37
CSDE1-215ENST00000533818 RAD50Q92878 1312 aa12.72□□□□□ -0.37
CSDE1-215ENST00000533818 ANGPT1Q15389 498 aa12.72□□□□□ -0.37
CSDE1-215ENST00000533818 FIBCD1Q8N539 461 aa12.72□□□□□ -0.37
CSDE1-215ENST00000533818 HAUS7Q99871 368 aa12.72□□□□□ -0.37
CSDE1-215ENST00000533818 BARX2Q9UMQ3 279 aaPredicted RBP12.72□□□□□ -0.37
CSDE1-215ENST00000533818 TRIP12Q14669 1992 aaPredicted RBP12.71□□□□□ -0.37
CSDE1-215ENST00000533818 MAGEB6P1A0A0J9YX57 407 aa12.71□□□□□ -0.37
CSDE1-215ENST00000533818 A6NJR5 290 aa12.71□□□□□ -0.37
CSDE1-215ENST00000533818 F5H6K3 240 aa12.71□□□□□ -0.37
CSDE1-215ENST00000533818 KLRC3Q07444 240 aa12.71□□□□□ -0.37
CSDE1-215ENST00000533818 MTMR3Q13615 1198 aa12.71□□□□□ -0.37
CSDE1-215ENST00000533818 MBTPS1Q14703 1052 aa12.71□□□□□ -0.37
CSDE1-215ENST00000533818 ZNF618Q5T7W0 954 aa12.71□□□□□ -0.37
CSDE1-215ENST00000533818 CYP2W1Q8TAV3 490 aa12.71□□□□□ -0.37
CSDE1-215ENST00000533818 RUBCNQ92622 972 aa12.71□□□□□ -0.37
CSDE1-215ENST00000533818 DBNDD2Q9BQY9 259 aa12.71□□□□□ -0.37
CSDE1-215ENST00000533818 RNF146Q9NTX7 359 aa12.71□□□□□ -0.37
CSDE1-215ENST00000533818 SCN10AQ9Y5Y9 1956 aa12.7□□□□□ -0.38
CSDE1-215ENST00000533818 BRD1O95696 1058 aa12.7□□□□□ -0.38
CSDE1-215ENST00000533818 NDUFB10O96000 172 aa12.7□□□□□ -0.38
CSDE1-215ENST00000533818 SDHBP21912 280 aa12.7□□□□□ -0.38
CSDE1-215ENST00000533818 CDK8P49336 464 aa12.7□□□□□ -0.38
CSDE1-215ENST00000533818 G3BP1Q13283 466 aaKnown RBP eCLIP12.7□□□□□ -0.38
CSDE1-215ENST00000533818 TRAF7Q6Q0C0 670 aa12.7□□□□□ -0.38
CSDE1-215ENST00000533818 SESTD1Q86VW0 696 aa12.7□□□□□ -0.38
CSDE1-215ENST00000533818 DCLK2Q8N568 766 aa12.7□□□□□ -0.38
CSDE1-215ENST00000533818 MORC4Q8TE76 937 aa12.7□□□□□ -0.38
CSDE1-215ENST00000533818 IL17RAQ96F46 866 aa12.7□□□□□ -0.38
CSDE1-215ENST00000533818 ZNF512BQ96KM6 892 aaPredicted RBP12.7□□□□□ -0.38
CSDE1-215ENST00000533818 IFIH1Q9BYX4 1025 aaKnown RBP12.7□□□□□ -0.38
CSDE1-215ENST00000533818 DCP1AQ9NPI6 582 aaPredicted RBP12.7□□□□□ -0.38
CSDE1-215ENST00000533818 SORCS3Q9UPU3 1222 aa12.7□□□□□ -0.38
CSDE1-215ENST00000533818 RWDD3Q9Y3V2 267 aa12.7□□□□□ -0.38
CSDE1-215ENST00000533818 EMSYQ7Z589 1322 aa12.69□□□□□ -0.38
CSDE1-215ENST00000533818 MMP1P03956 469 aa12.69□□□□□ -0.38
CSDE1-215ENST00000533818 NRIP1P48552 1158 aa12.69□□□□□ -0.38
CSDE1-215ENST00000533818 ATXN1P54253 815 aaKnown RBP12.69□□□□□ -0.38
CSDE1-215ENST00000533818 TMED8Q6PL24 325 aaPredicted RBP12.69□□□□□ -0.38
CSDE1-215ENST00000533818 ADGRD2Q7Z7M1 963 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms