RNA–Protein interactions for RNA: ENST00000533705.5

UBQLN1-206, Transcript of ubiquilin 1, humanhuman

TSL 1 (best)

Gene UBQLN1, Length 6,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-206ENST00000533705 ASNSP08243 561 aa6.98□□□□□ -1.29
UBQLN1-206ENST00000533705 CYP21A2P08686 494 aa6.98□□□□□ -1.29
UBQLN1-206ENST00000533705 H2AFZP0C0S5 128 aa6.98□□□□□ -1.29
UBQLN1-206ENST00000533705 MARK3P27448 753 aa6.98□□□□□ -1.29
UBQLN1-206ENST00000533705 ELF1P32519 619 aa6.98□□□□□ -1.29
UBQLN1-206ENST00000533705 MTMR3Q13615 1198 aa6.98□□□□□ -1.29
UBQLN1-206ENST00000533705 EXOC3L4Q17RC7 722 aa6.98□□□□□ -1.29
UBQLN1-206ENST00000533705 PDXDC2PQ6P474 469 aa6.98□□□□□ -1.29
UBQLN1-206ENST00000533705 H2AFVQ71UI9 128 aa6.98□□□□□ -1.29
UBQLN1-206ENST00000533705 PPFIBP2Q8ND30 876 aa6.98□□□□□ -1.29
UBQLN1-206ENST00000533705 TBCKQ8TEA7 893 aa6.98□□□□□ -1.29
UBQLN1-206ENST00000533705 P3H4Q92791 437 aa6.98□□□□□ -1.29
UBQLN1-206ENST00000533705 LSG1Q9H089 658 aaKnown RBP6.98□□□□□ -1.29
UBQLN1-206ENST00000533705 CYP2D7A0A087X1C5 515 aa6.98□□□□□ -1.29
UBQLN1-206ENST00000533705 GH2P01242 217 aa6.98□□□□□ -1.29
UBQLN1-206ENST00000533705 ATXN8OSP0DMR3 200 aa6.98□□□□□ -1.29
UBQLN1-206ENST00000533705 MFAP3P55082 362 aa6.98□□□□□ -1.29
UBQLN1-206ENST00000533705 SNAP25P60880 206 aa6.98□□□□□ -1.29
UBQLN1-206ENST00000533705 OSTNP61366 133 aa6.98□□□□□ -1.29
UBQLN1-206ENST00000533705 TFAMQ00059 246 aaKnown RBP6.98□□□□□ -1.29
UBQLN1-206ENST00000533705 MYL7Q01449 175 aa6.98□□□□□ -1.29
UBQLN1-206ENST00000533705 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.98□□□□□ -1.29
UBQLN1-206ENST00000533705 GRK7Q8WTQ7 553 aa6.98□□□□□ -1.29
UBQLN1-206ENST00000533705 WRNIP1Q96S55 665 aa6.98□□□□□ -1.29
UBQLN1-206ENST00000533705 LMBRD1Q9NUN5 540 aa6.98□□□□□ -1.29
UBQLN1-206ENST00000533705 ARHGEF37A1IGU5 675 aa6.98□□□□□ -1.29
UBQLN1-206ENST00000533705 A6NJR5 290 aa6.98□□□□□ -1.29
UBQLN1-206ENST00000533705 MAP7D3Q8IWC1 876 aa6.98□□□□□ -1.29
UBQLN1-206ENST00000533705 SYNE4Q8N205 404 aa6.98□□□□□ -1.29
UBQLN1-206ENST00000533705 MICALL1Q8N3F8 863 aa6.98□□□□□ -1.29
UBQLN1-206ENST00000533705 C7orf31Q8N865 590 aa6.98□□□□□ -1.29
UBQLN1-206ENST00000533705 TTLL11Q8NHH1 800 aa6.98□□□□□ -1.29
UBQLN1-206ENST00000533705 CACTINQ8WUQ7 758 aaKnown RBP6.98□□□□□ -1.29
UBQLN1-206ENST00000533705 ACCSQ96QU6 501 aa6.98□□□□□ -1.29
UBQLN1-206ENST00000533705 CCDC68Q9H2F9 335 aa6.98□□□□□ -1.29
UBQLN1-206ENST00000533705 TDRD3Q9H7E2 651 aaKnown RBP6.98□□□□□ -1.29
UBQLN1-206ENST00000533705 NARFQ9UHQ1 456 aa6.98□□□□□ -1.29
UBQLN1-206ENST00000533705 PCDHB4Q9Y5E5 795 aa6.98□□□□□ -1.29
UBQLN1-206ENST00000533705 KCNK3O14649 394 aa6.98□□□□□ -1.29
UBQLN1-206ENST00000533705 NOL3O60936 208 aaKnown RBP6.98□□□□□ -1.29
UBQLN1-206ENST00000533705 CRKP46108 304 aa6.98□□□□□ -1.29
UBQLN1-206ENST00000533705 ZNF445P59923 1031 aa6.98□□□□□ -1.29
UBQLN1-206ENST00000533705 HLFQ16534 295 aa6.98□□□□□ -1.29
UBQLN1-206ENST00000533705 PTPROQ16827 1216 aa6.98□□□□□ -1.29
UBQLN1-206ENST00000533705 SPATA1Q5VX52 437 aa6.98□□□□□ -1.29
UBQLN1-206ENST00000533705 ZBTB33Q86T24 672 aa6.98□□□□□ -1.29
UBQLN1-206ENST00000533705 BBS5Q8N3I7 341 aa6.98□□□□□ -1.29
UBQLN1-206ENST00000533705 PI4K2BQ8TCG2 481 aa6.98□□□□□ -1.29
UBQLN1-206ENST00000533705 AFAP1L1Q8TED9 768 aa6.98□□□□□ -1.29
UBQLN1-206ENST00000533705 GJD4Q96KN9 370 aaPredicted RBP6.98□□□□□ -1.29
UBQLN1-206ENST00000533705 KRT12Q99456 494 aa6.98□□□□□ -1.29
UBQLN1-206ENST00000533705 NR2F2P24468 414 aa6.98□□□□□ -1.29
UBQLN1-206ENST00000533705 PTPN12Q05209 780 aaKnown RBP6.98□□□□□ -1.29
UBQLN1-206ENST00000533705 RASGRF1Q13972 1273 aa6.98□□□□□ -1.29
UBQLN1-206ENST00000533705 PPP2R5EQ16537 467 aa6.98□□□□□ -1.29
UBQLN1-206ENST00000533705 RC3H1Q5TC82 1133 aaKnown RBP6.98□□□□□ -1.29
UBQLN1-206ENST00000533705 EEF2KMTQ96G04 330 aa6.98□□□□□ -1.29
UBQLN1-206ENST00000533705 SPON1Q9HCB6 807 aa6.98□□□□□ -1.29
UBQLN1-206ENST00000533705 SAR1BQ9Y6B6 198 aa6.98□□□□□ -1.29
UBQLN1-206ENST00000533705 KDM5CP41229 1560 aa6.98□□□□□ -1.29
UBQLN1-206ENST00000533705 TSPOAP1O95153 1857 aa6.98□□□□□ -1.29
UBQLN1-206ENST00000533705 MYO3BQ8WXR4 1341 aa6.98□□□□□ -1.29
UBQLN1-206ENST00000533705 MEIS1O00470 390 aa6.97□□□□□ -1.29
UBQLN1-206ENST00000533705 ECE2O60344 883 aa6.97□□□□□ -1.29
UBQLN1-206ENST00000533705 PSAPP07602 524 aa6.97□□□□□ -1.29
UBQLN1-206ENST00000533705 SRGAP2CP0DJJ0 459 aa6.97□□□□□ -1.29
UBQLN1-206ENST00000533705 HOXA13P31271 388 aaPredicted RBP6.97□□□□□ -1.29
UBQLN1-206ENST00000533705 ABCD1P33897 745 aa6.97□□□□□ -1.29
UBQLN1-206ENST00000533705 ADCY8P40145 1251 aa6.97□□□□□ -1.29
UBQLN1-206ENST00000533705 CDK8P49336 464 aa6.97□□□□□ -1.29
UBQLN1-206ENST00000533705 CACNB1Q02641 598 aaPredicted RBP6.97□□□□□ -1.29
UBQLN1-206ENST00000533705 PPARDQ03181 441 aa6.97□□□□□ -1.29
UBQLN1-206ENST00000533705 NEDD9Q14511 834 aa6.97□□□□□ -1.29
UBQLN1-206ENST00000533705 CDC37Q16543 378 aaPredicted RBP6.97□□□□□ -1.29
UBQLN1-206ENST00000533705 DENND2CQ68D51 928 aa6.97□□□□□ -1.29
UBQLN1-206ENST00000533705 TMEM179Q6ZVK1 233 aa6.97□□□□□ -1.29
UBQLN1-206ENST00000533705 TAB3Q8N5C8 712 aaPredicted RBP6.97□□□□□ -1.29
UBQLN1-206ENST00000533705 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.97□□□□□ -1.29
UBQLN1-206ENST00000533705 PUS7LQ9H0K6 701 aaKnown RBP6.97□□□□□ -1.29
UBQLN1-206ENST00000533705 PLEKHA4Q9H4M7 779 aa6.97□□□□□ -1.29
UBQLN1-206ENST00000533705 POLIQ9UNA4 740 aa6.97□□□□□ -1.29
UBQLN1-206ENST00000533705 CLIC4Q9Y696 253 aa6.97□□□□□ -1.29
UBQLN1-206ENST00000533705 ERVK-7P63135 1459 aa6.97□□□□□ -1.29
UBQLN1-206ENST00000533705 U2AF2P26368 475 aaKnown RBP eCLIP6.97□□□□□ -1.291e-8■■□□□ 12.4
UBQLN1-206ENST00000533705 PSMC2P35998 433 aaKnown RBP6.97□□□□□ -1.29
UBQLN1-206ENST00000533705 VPS41P49754 854 aa6.97□□□□□ -1.29
UBQLN1-206ENST00000533705 TXNRD1Q16881 649 aa6.97□□□□□ -1.29
UBQLN1-206ENST00000533705 GKAP1Q5VSY0 366 aaPredicted RBP6.97□□□□□ -1.29
UBQLN1-206ENST00000533705 ELMSAN1Q6PJG2 1045 aa6.97□□□□□ -1.29
UBQLN1-206ENST00000533705 EPSTI1Q96J88 318 aa6.97□□□□□ -1.29
UBQLN1-206ENST00000533705 SLITRK6Q9H5Y7 841 aa6.97□□□□□ -1.29
UBQLN1-206ENST00000533705 PLCB1Q9NQ66 1216 aa6.97□□□□□ -1.29
UBQLN1-206ENST00000533705 KRIT1O00522 736 aa6.97□□□□□ -1.29
UBQLN1-206ENST00000533705 ADRA2BP18089 450 aa6.97□□□□□ -1.29
UBQLN1-206ENST00000533705 PHBP35232 272 aa6.97□□□□□ -1.29
UBQLN1-206ENST00000533705 KRT71Q3SY84 523 aa6.97□□□□□ -1.29
UBQLN1-206ENST00000533705 RINT1Q6NUQ1 792 aa6.97□□□□□ -1.29
UBQLN1-206ENST00000533705 RNF207Q6ZRF8 634 aa6.97□□□□□ -1.29
UBQLN1-206ENST00000533705 NOP9Q86U38 636 aaKnown RBP6.97□□□□□ -1.29
UBQLN1-206ENST00000533705 ZNF589Q86UQ0 364 aaPredicted RBP6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms