RNA–Protein interactions for RNA: ENST00000533683.6

SAMD1-202, Transcript of sterile alpha motif domain containing 1, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene SAMD1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD1-202ENST00000533683 MIGA2Q7L4E1 593 aa31.92■■■□□ 2.7
SAMD1-202ENST00000533683 EXOC1Q9NV70 894 aa31.92■■■□□ 2.7
SAMD1-202ENST00000533683 PCDHA12Q9UN75 941 aa31.92■■■□□ 2.7
SAMD1-202ENST00000533683 MARCH6O60337 910 aa31.92■■■□□ 2.7
SAMD1-202ENST00000533683 ADKP55263 362 aaKnown RBP31.92■■■□□ 2.7
SAMD1-202ENST00000533683 SPAG1Q07617 926 aa31.92■■■□□ 2.7
SAMD1-202ENST00000533683 MCM6Q14566 821 aa31.92■■■□□ 2.7
SAMD1-202ENST00000533683 NBPF9Q3BBW0 867 aa31.92■■■□□ 2.7
SAMD1-202ENST00000533683 TCP11X2Q5H9J9 407 aa31.92■■■□□ 2.7
SAMD1-202ENST00000533683 CRYGNQ8WXF5 182 aa31.92■■■□□ 2.7
SAMD1-202ENST00000533683 LARP4BQ92615 738 aaKnown RBP31.92■■■□□ 2.7
SAMD1-202ENST00000533683 CCDC47Q96A33 483 aaKnown RBP31.92■■■□□ 2.7
SAMD1-202ENST00000533683 CYP3A7-CYP3A51PA0A087WV96 503 aa31.91■■■□□ 2.7
SAMD1-202ENST00000533683 WNT10BO00744 389 aa31.91■■■□□ 2.7
SAMD1-202ENST00000533683 TAL1P17542 331 aaPredicted RBP31.91■■■□□ 2.7
SAMD1-202ENST00000533683 CYP3A7P24462 503 aa31.91■■■□□ 2.7
SAMD1-202ENST00000533683 CEP135Q66GS9 1140 aa31.91■■■□□ 2.7
SAMD1-202ENST00000533683 CIAPIN1Q6FI81 312 aa31.91■■■□□ 2.7
SAMD1-202ENST00000533683 TAOK3Q9H2K8 898 aa31.91■■■□□ 2.7
SAMD1-202ENST00000533683 KCNJ18B7U540 433 aa31.91■■■□□ 2.7
SAMD1-202ENST00000533683 PSMA7O14818 248 aa31.91■■■□□ 2.7
SAMD1-202ENST00000533683 CCT6AP40227 531 aaKnown RBP31.91■■■□□ 2.7
SAMD1-202ENST00000533683 MMP14P50281 582 aa31.91■■■□□ 2.7
SAMD1-202ENST00000533683 STAT2P52630 851 aa31.91■■■□□ 2.7
SAMD1-202ENST00000533683 KCNJ12Q14500 433 aa31.91■■■□□ 2.7
SAMD1-202ENST00000533683 PPP1R13BQ96KQ4 1090 aa31.91■■■□□ 2.7
SAMD1-202ENST00000533683 PGAP2Q9UHJ9 254 aa31.91■■■□□ 2.7
SAMD1-202ENST00000533683 RIOK3O14730 519 aaKnown RBP31.9■■■□□ 2.7
SAMD1-202ENST00000533683 STK4Q13043 487 aa31.9■■■□□ 2.7
SAMD1-202ENST00000533683 TMEM119Q4V9L6 283 aa31.9■■■□□ 2.7
SAMD1-202ENST00000533683 IRF2BP1Q8IU81 584 aa31.9■■■□□ 2.7
SAMD1-202ENST00000533683 MBOAT7Q96N66 472 aa31.9■■■□□ 2.7
SAMD1-202ENST00000533683 GOPCQ9HD26 462 aa31.9■■■□□ 2.7
SAMD1-202ENST00000533683 FRMD4AQ9P2Q2 1039 aaPredicted RBP31.9■■■□□ 2.7
SAMD1-202ENST00000533683 SHTN1A0MZ66 631 aa31.9■■■□□ 2.7
SAMD1-202ENST00000533683 MYMKA6NI61 221 aa31.9■■■□□ 2.7
SAMD1-202ENST00000533683 DYNC1I1O14576 645 aa31.9■■■□□ 2.7
SAMD1-202ENST00000533683 OPLAHO14841 1288 aa31.9■■■□□ 2.7
SAMD1-202ENST00000533683 GTF2F1P35269 517 aaKnown RBP eCLIP31.9■■■□□ 2.7
SAMD1-202ENST00000533683 MCTP2Q6DN12 878 aa31.9■■■□□ 2.7
SAMD1-202ENST00000533683 RAD54LQ92698 747 aa31.9■■■□□ 2.7
SAMD1-202ENST00000533683 KCNMB3Q9NPA1 279 aa31.9■■■□□ 2.7
SAMD1-202ENST00000533683 FER1L6Q2WGJ9 1857 aa31.89■■■□□ 2.7
SAMD1-202ENST00000533683 ARHGAP4P98171 946 aa31.89■■■□□ 2.7
SAMD1-202ENST00000533683 ECM1Q16610 540 aa31.89■■■□□ 2.7
SAMD1-202ENST00000533683 KCNK18Q7Z418 384 aa31.89■■■□□ 2.7
SAMD1-202ENST00000533683 JDP2Q8WYK2 163 aa31.89■■■□□ 2.7
SAMD1-202ENST00000533683 DHTKD1Q96HY7 919 aaPredicted RBP31.89■■■□□ 2.7
SAMD1-202ENST00000533683 FCER1AP12319 257 aa31.88■■■□□ 2.69
SAMD1-202ENST00000533683 COPB1P53618 953 aaKnown RBP31.88■■■□□ 2.69
SAMD1-202ENST00000533683 FAM83BQ5T0W9 1011 aa31.88■■■□□ 2.69
SAMD1-202ENST00000533683 MOXD1Q6UVY6 613 aa31.88■■■□□ 2.69
SAMD1-202ENST00000533683 BAG1Q99933 345 aaPredicted RBP31.88■■■□□ 2.69
SAMD1-202ENST00000533683 MYOZ2Q9NPC6 264 aa31.88■■■□□ 2.69
SAMD1-202ENST00000533683 N4BP3O15049 544 aa31.88■■■□□ 2.69
SAMD1-202ENST00000533683 TTI2Q6NXR4 508 aa31.88■■■□□ 2.69
SAMD1-202ENST00000533683 UIMC1Q96RL1 719 aa31.88■■■□□ 2.69
SAMD1-202ENST00000533683 VPS16Q9H269 839 aa31.88■■■□□ 2.69
SAMD1-202ENST00000533683 CAP2P40123 477 aa31.87■■■□□ 2.69
SAMD1-202ENST00000533683 ANKRD20A12PQ8NF67 263 aa31.87■■■□□ 2.69
SAMD1-202ENST00000533683 TAB2Q9NYJ8 693 aa31.87■■■□□ 2.69
SAMD1-202ENST00000533683 PAXBP1Q9Y5B6 917 aa31.87■■■□□ 2.69
SAMD1-202ENST00000533683 SMCHD1A6NHR9 2005 aa31.87■■■□□ 2.69
SAMD1-202ENST00000533683 ARHGAP6O43182 974 aa31.87■■■□□ 2.69
SAMD1-202ENST00000533683 POLD1P28340 1107 aa31.87■■■□□ 2.69
SAMD1-202ENST00000533683 GTPBP4Q9BZE4 634 aaKnown RBP31.87■■■□□ 2.69
SAMD1-202ENST00000533683 STX10O60499 249 aa31.86■■■□□ 2.69
SAMD1-202ENST00000533683 FOSP01100 380 aaPredicted RBP31.86■■■□□ 2.69
SAMD1-202ENST00000533683 CREBRFQ8IUR6 639 aa31.86■■■□□ 2.69
SAMD1-202ENST00000533683 ZNF592Q92610 1267 aa31.86■■■□□ 2.69
SAMD1-202ENST00000533683 BRCA1P38398 1863 aaKnown RBP31.86■■■□□ 2.69
SAMD1-202ENST00000533683 SPDYE3A6NKU9 549 aa31.85■■■□□ 2.69
SAMD1-202ENST00000533683 AKR1B15C9JRZ8 316 aaPredicted RBP31.85■■■□□ 2.69
SAMD1-202ENST00000533683 NFKBIEO00221 500 aa31.85■■■□□ 2.69
SAMD1-202ENST00000533683 RBL2Q08999 1139 aa31.85■■■□□ 2.69
SAMD1-202ENST00000533683 CNNM4Q6P4Q7 775 aa31.85■■■□□ 2.69
SAMD1-202ENST00000533683 TRIM47Q96LD4 638 aa31.85■■■□□ 2.69
SAMD1-202ENST00000533683 MAP3K10Q02779 954 aa31.85■■■□□ 2.69
SAMD1-202ENST00000533683 PPFIBP1Q86W92 1011 aa31.85■■■□□ 2.69
SAMD1-202ENST00000533683 KIAA0895Q8NCT3 520 aa31.85■■■□□ 2.69
SAMD1-202ENST00000533683 FBXO41Q8TF61 875 aa31.85■■■□□ 2.69
SAMD1-202ENST00000533683 HPS3Q969F9 1004 aa31.85■■■□□ 2.69
SAMD1-202ENST00000533683 SRRTQ9BXP5 876 aaKnown RBP31.85■■■□□ 2.69
SAMD1-202ENST00000533683 THAP9Q9H5L6 903 aa31.85■■■□□ 2.69
SAMD1-202ENST00000533683 VCPKMTQ9H867 229 aa31.85■■■□□ 2.69
SAMD1-202ENST00000533683 PVALEFA0A1B0GWK0 134 aa31.84■■■□□ 2.69
SAMD1-202ENST00000533683 HOXA13P31271 388 aaPredicted RBP31.84■■■□□ 2.69
SAMD1-202ENST00000533683 SREBF1P36956 1147 aa31.84■■■□□ 2.69
SAMD1-202ENST00000533683 UNC13DQ70J99 1090 aa31.84■■■□□ 2.69
SAMD1-202ENST00000533683 DYMQ7RTS9 669 aa31.84■■■□□ 2.69
SAMD1-202ENST00000533683 P2RX5Q93086 422 aa31.84■■■□□ 2.69
SAMD1-202ENST00000533683 DUSP9Q99956 384 aaKnown RBP31.84■■■□□ 2.69
SAMD1-202ENST00000533683 MTFR1LQ9H019 292 aa31.84■■■□□ 2.69
SAMD1-202ENST00000533683 SCAF8Q9UPN6 1271 aaKnown RBP31.84■■■□□ 2.69
SAMD1-202ENST00000533683 ITIH6Q6UXX5 1313 aa31.84■■■□□ 2.69
SAMD1-202ENST00000533683 CCNE1P24864 410 aa31.84■■■□□ 2.69
SAMD1-202ENST00000533683 COBLL1Q53SF7 1204 aa31.84■■■□□ 2.69
SAMD1-202ENST00000533683 HYIQ5T013 277 aa31.84■■■□□ 2.69
SAMD1-202ENST00000533683 FCHSD1Q86WN1 690 aa31.84■■■□□ 2.69
SAMD1-202ENST00000533683 PPP1R1BQ9UD71 204 aaPredicted RBP31.84■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms