RNA–Protein interactions for RNA: ENST00000533476.5

UBXN1-215, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 1,912 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-215ENST00000533476 NAP1L4Q99733 375 aaKnown RBP21.58■■□□□ 1.04
UBXN1-215ENST00000533476 PSTPIP2Q9H939 334 aa21.58■■□□□ 1.04
UBXN1-215ENST00000533476 FAM53CQ9NYF3 392 aa21.58■■□□□ 1.04
UBXN1-215ENST00000533476 ATF5Q9Y2D1 282 aaPredicted RBP21.58■■□□□ 1.04
UBXN1-215ENST00000533476 ARFGEF1Q9Y6D6 1849 aa21.57■■□□□ 1.04
UBXN1-215ENST00000533476 PVALEFA0A1B0GWK0 134 aa21.57■■□□□ 1.04
UBXN1-215ENST00000533476 RNF225M0QZC1 329 aaPredicted RBP21.57■■□□□ 1.04
UBXN1-215ENST00000533476 TMEM119Q4V9L6 283 aa21.57■■□□□ 1.04
UBXN1-215ENST00000533476 SH3BP5LQ7L8J4 393 aa21.57■■□□□ 1.04
UBXN1-215ENST00000533476 DDX25Q9UHL0 483 aaKnown RBP21.57■■□□□ 1.04
UBXN1-215ENST00000533476 MYH7BA7E2Y1 1941 aa21.57■■□□□ 1.04
UBXN1-215ENST00000533476 POTEMA6NI47 508 aa21.57■■□□□ 1.04
UBXN1-215ENST00000533476 FCER1AP12319 257 aa21.57■■□□□ 1.04
UBXN1-215ENST00000533476 HOXA7P31268 230 aaPredicted RBP21.57■■□□□ 1.04
UBXN1-215ENST00000533476 RBM5P52756 815 aaKnown RBP eCLIP21.57■■□□□ 1.04
UBXN1-215ENST00000533476 ERVK-24P63145 666 aa21.57■■□□□ 1.04
UBXN1-215ENST00000533476 MAP3K9P80192 1104 aa21.57■■□□□ 1.04
UBXN1-215ENST00000533476 KRT79Q5XKE5 535 aa21.57■■□□□ 1.04
UBXN1-215ENST00000533476 UNC13DQ70J99 1090 aa21.57■■□□□ 1.04
UBXN1-215ENST00000533476 RAD54LQ92698 747 aa21.57■■□□□ 1.04
UBXN1-215ENST00000533476 MYMKA6NI61 221 aa21.56■■□□□ 1.04
UBXN1-215ENST00000533476 KRT9P35527 623 aa21.56■■□□□ 1.04
UBXN1-215ENST00000533476 SLC1A4P43007 532 aa21.56■■□□□ 1.04
UBXN1-215ENST00000533476 DNM2P50570 870 aa21.56■■□□□ 1.04
UBXN1-215ENST00000533476 MCM6Q14566 821 aa21.56■■□□□ 1.04
UBXN1-215ENST00000533476 ERCC6LQ2NKX8 1250 aa21.56■■□□□ 1.04
UBXN1-215ENST00000533476 QRICH1Q2TAL8 776 aa21.56■■□□□ 1.04
UBXN1-215ENST00000533476 ANKRD40Q6AI12 368 aa21.56■■□□□ 1.04
UBXN1-215ENST00000533476 KIAA0895Q8NCT3 520 aa21.56■■□□□ 1.04
UBXN1-215ENST00000533476 MNS1Q8NEH6 495 aa21.56■■□□□ 1.04
UBXN1-215ENST00000533476 SNX29Q8TEQ0 813 aa21.56■■□□□ 1.04
UBXN1-215ENST00000533476 TRIM34Q9BYJ4 488 aa21.56■■□□□ 1.04
UBXN1-215ENST00000533476 LRRC27Q9C0I9 530 aa21.56■■□□□ 1.04
UBXN1-215ENST00000533476 FAM196BA6NMK8 535 aa21.55■■□□□ 1.04
UBXN1-215ENST00000533476 TADA3O75528 432 aa21.55■■□□□ 1.04
UBXN1-215ENST00000533476 H2AFXP16104 143 aaPredicted RBP21.55■■□□□ 1.04
UBXN1-215ENST00000533476 SLFN13Q68D06 897 aa21.55■■□□□ 1.04
UBXN1-215ENST00000533476 FBXO38Q6PIJ6 1188 aa21.55■■□□□ 1.04
UBXN1-215ENST00000533476 TMEM179Q6ZVK1 233 aa21.55■■□□□ 1.04
UBXN1-215ENST00000533476 HAS1Q92839 578 aa21.55■■□□□ 1.04
UBXN1-215ENST00000533476 CNKSR1Q969H4 720 aa21.55■■□□□ 1.04
UBXN1-215ENST00000533476 GABPB1Q06547 395 aaPredicted RBP21.55■■□□□ 1.04
UBXN1-215ENST00000533476 CCDC125Q86Z20 511 aa21.55■■□□□ 1.04
UBXN1-215ENST00000533476 ZSCAN29Q8IWY8 852 aaPredicted RBP21.55■■□□□ 1.04
UBXN1-215ENST00000533476 TUBGCP2Q9BSJ2 902 aa21.55■■□□□ 1.04
UBXN1-215ENST00000533476 LZTFL1Q9NQ48 299 aa21.55■■□□□ 1.04
UBXN1-215ENST00000533476 MRFAP1Q9Y605 127 aa21.55■■□□□ 1.04
UBXN1-215ENST00000533476 ATRNL1Q5VV63 1379 aa21.55■■□□□ 1.04
UBXN1-215ENST00000533476 COL2A1P02458 1487 aaPredicted RBP21.54■■□□□ 1.04
UBXN1-215ENST00000533476 SHROOM1Q2M3G4 852 aaPredicted RBP21.54■■□□□ 1.04
UBXN1-215ENST00000533476 CNOT6LQ96LI5 555 aaKnown RBP21.54■■□□□ 1.04
UBXN1-215ENST00000533476 DNAJC7Q99615 494 aa21.54■■□□□ 1.04
UBXN1-215ENST00000533476 PRDM10Q9NQV6 1147 aa21.54■■□□□ 1.04
UBXN1-215ENST00000533476 CAPN11Q9UMQ6 739 aa21.54■■□□□ 1.04
UBXN1-215ENST00000533476 TTC26A0AVF1 554 aa21.53■■□□□ 1.04
UBXN1-215ENST00000533476 EFCAB8A8MWE9 144 aa21.53■■□□□ 1.04
UBXN1-215ENST00000533476 KIF5CO60282 957 aa21.53■■□□□ 1.04
UBXN1-215ENST00000533476 ICA1Q05084 483 aa21.53■■□□□ 1.04
UBXN1-215ENST00000533476 SEPT2Q15019 361 aa21.53■■□□□ 1.04
UBXN1-215ENST00000533476 CDC37Q16543 378 aaPredicted RBP21.53■■□□□ 1.04
UBXN1-215ENST00000533476 CENPPQ6IPU0 288 aa21.53■■□□□ 1.04
UBXN1-215ENST00000533476 SIAH1Q8IUQ4 282 aa21.53■■□□□ 1.04
UBXN1-215ENST00000533476 C7orf43Q8WVR3 580 aa21.53■■□□□ 1.04
UBXN1-215ENST00000533476 NUDT12Q9BQG2 462 aa21.53■■□□□ 1.04
UBXN1-215ENST00000533476 CARD6Q9BX69 1037 aa21.53■■□□□ 1.04
UBXN1-215ENST00000533476 PCDHA1Q9Y5I3 950 aa21.53■■□□□ 1.04
UBXN1-215ENST00000533476 B4DLN1 442 aa21.53■■□□□ 1.04
UBXN1-215ENST00000533476 GMCL1P1Q8NEA9 526 aa21.53■■□□□ 1.04
UBXN1-215ENST00000533476 OR8K1Q8NGG5 319 aa21.53■■□□□ 1.04
UBXN1-215ENST00000533476 LUC7L2Q9Y383 392 aaKnown RBP21.53■■□□□ 1.04
UBXN1-215ENST00000533476 PES1O00541 588 aaKnown RBP21.52■■□□□ 1.04
UBXN1-215ENST00000533476 SLC26A4O43511 780 aa21.52■■□□□ 1.04
UBXN1-215ENST00000533476 ENTPD3O75355 529 aa21.52■■□□□ 1.04
UBXN1-215ENST00000533476 CHRNA5P30532 468 aa21.52■■□□□ 1.04
UBXN1-215ENST00000533476 AOC3Q16853 763 aa21.52■■□□□ 1.04
UBXN1-215ENST00000533476 HYIQ5T013 277 aa21.52■■□□□ 1.04
UBXN1-215ENST00000533476 KRT222Q8N1A0 295 aa21.52■■□□□ 1.04
UBXN1-215ENST00000533476 RETREG2Q8NC44 543 aa21.52■■□□□ 1.04
UBXN1-215ENST00000533476 ACRBPQ8NEB7 543 aa21.52■■□□□ 1.04
UBXN1-215ENST00000533476 UBXN4Q92575 508 aa21.52■■□□□ 1.04
UBXN1-215ENST00000533476 SEMA6BQ9H3T3 888 aa21.52■■□□□ 1.04
UBXN1-215ENST00000533476 SLC39A2Q9NP94 309 aa21.52■■□□□ 1.04
UBXN1-215ENST00000533476 ZNF219Q9P2Y4 722 aaPredicted RBP21.52■■□□□ 1.04
UBXN1-215ENST00000533476 KDM3AQ9Y4C1 1321 aa21.52■■□□□ 1.04
UBXN1-215ENST00000533476 USP11P51784 963 aa21.51■■□□□ 1.03
UBXN1-215ENST00000533476 EHHADHQ08426 723 aa21.51■■□□□ 1.03
UBXN1-215ENST00000533476 ABCB5Q2M3G0 1257 aa21.51■■□□□ 1.03
UBXN1-215ENST00000533476 KCNK18Q7Z418 384 aa21.51■■□□□ 1.03
UBXN1-215ENST00000533476 GUF1Q8N442 669 aaKnown RBP21.51■■□□□ 1.03
UBXN1-215ENST00000533476 HPS3Q969F9 1004 aa21.51■■□□□ 1.03
UBXN1-215ENST00000533476 GMCL1Q96IK5 515 aa21.51■■□□□ 1.03
UBXN1-215ENST00000533476 NUP58Q9BVL2 599 aa21.51■■□□□ 1.03
UBXN1-215ENST00000533476 CYP3A7-CYP3A51PA0A087WV96 503 aa21.51■■□□□ 1.03
UBXN1-215ENST00000533476 A0A0U1RQJ8 604 aa21.51■■□□□ 1.03
UBXN1-215ENST00000533476 RAD21O60216 631 aa21.51■■□□□ 1.03
UBXN1-215ENST00000533476 CYP3A7P24462 503 aa21.51■■□□□ 1.03
UBXN1-215ENST00000533476 MTIF2P46199 727 aaKnown RBP21.51■■□□□ 1.03
UBXN1-215ENST00000533476 PSMD2Q13200 908 aa21.51■■□□□ 1.03
UBXN1-215ENST00000533476 AP3B2Q13367 1082 aa21.51■■□□□ 1.03
UBXN1-215ENST00000533476 ARHGAP29Q52LW3 1261 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms