RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 RAD17O75943 681 aa19.25■□□□□ 0.67
PHRF1-205ENST00000533464 RESP18Q5W5W9 173 aa19.25■□□□□ 0.67
PHRF1-205ENST00000533464 ADAT2Q7Z6V5 191 aaKnown RBP19.25■□□□□ 0.67
PHRF1-205ENST00000533464 RFX7Q2KHR2 1363 aa19.25■□□□□ 0.67
PHRF1-205ENST00000533464 ZBTB8OSQ8IWT0 167 aa19.25■□□□□ 0.67
PHRF1-205ENST00000533464 LRRIQ4A6NIV6 560 aa19.25■□□□□ 0.67
PHRF1-205ENST00000533464 TRIM28Q13263 835 aaKnown RBP19.25■□□□□ 0.67
PHRF1-205ENST00000533464 TAOK1Q7L7X3 1001 aa19.25■□□□□ 0.67
PHRF1-205ENST00000533464 SRGAP1Q7Z6B7 1085 aa19.25■□□□□ 0.67
PHRF1-205ENST00000533464 RABGGTAQ92696 567 aa19.25■□□□□ 0.67
PHRF1-205ENST00000533464 COA1Q9GZY4 146 aa19.25■□□□□ 0.67
PHRF1-205ENST00000533464 CTNNA1P35221 906 aaKnown RBP19.25■□□□□ 0.67
PHRF1-205ENST00000533464 RABL6Q3YEC7 729 aaPredicted RBP19.25■□□□□ 0.67
PHRF1-205ENST00000533464 DENND2CQ68D51 928 aa19.25■□□□□ 0.67
PHRF1-205ENST00000533464 H0YCG3 227 aa19.24■□□□□ 0.67
PHRF1-205ENST00000533464 POMGNT1Q8WZA1 660 aa19.24■□□□□ 0.67
PHRF1-205ENST00000533464 IFNB1P01574 187 aa19.24■□□□□ 0.67
PHRF1-205ENST00000533464 ENAHQ8N8S7 591 aaPredicted RBP19.24■□□□□ 0.67
PHRF1-205ENST00000533464 LY9Q9HBG7 655 aa19.24■□□□□ 0.67
PHRF1-205ENST00000533464 TNS3Q68CZ2 1445 aa19.24■□□□□ 0.67
PHRF1-205ENST00000533464 SOWAHDA6NJG2 315 aa19.24■□□□□ 0.67
PHRF1-205ENST00000533464 ATG9AQ7Z3C6 839 aa19.24■□□□□ 0.67
PHRF1-205ENST00000533464 HGSO14964 777 aaPredicted RBP19.24■□□□□ 0.67
PHRF1-205ENST00000533464 PDE6CP51160 858 aa19.24■□□□□ 0.67
PHRF1-205ENST00000533464 POLGP54098 1239 aaPredicted RBP19.24■□□□□ 0.67
PHRF1-205ENST00000533464 KMT5BQ4FZB7 885 aa19.24■□□□□ 0.67
PHRF1-205ENST00000533464 ACRBPQ8NEB7 543 aa19.24■□□□□ 0.67
PHRF1-205ENST00000533464 DISC1Q9NRI5 854 aa19.24■□□□□ 0.67
PHRF1-205ENST00000533464 CDC27P30260 824 aa19.23■□□□□ 0.67
PHRF1-205ENST00000533464 STAT2P52630 851 aa19.23■□□□□ 0.67
PHRF1-205ENST00000533464 EAPPQ56P03 285 aaPredicted RBP19.23■□□□□ 0.67
PHRF1-205ENST00000533464 CFAP157Q5JU67 520 aa19.23■□□□□ 0.67
PHRF1-205ENST00000533464 CABS1Q96KC9 395 aa19.23■□□□□ 0.67
PHRF1-205ENST00000533464 WDR11Q9BZH6 1224 aa19.23■□□□□ 0.67
PHRF1-205ENST00000533464 NDC80O14777 642 aa19.23■□□□□ 0.67
PHRF1-205ENST00000533464 CEP85LQ5SZL2 805 aa19.23■□□□□ 0.67
PHRF1-205ENST00000533464 RASSF4Q9H2L5 321 aa19.23■□□□□ 0.67
PHRF1-205ENST00000533464 DPH5Q9H2P9 285 aa19.23■□□□□ 0.67
PHRF1-205ENST00000533464 DCP1AQ9NPI6 582 aaPredicted RBP19.23■□□□□ 0.67
PHRF1-205ENST00000533464 FAM184BQ9ULE4 1060 aa19.23■□□□□ 0.67
PHRF1-205ENST00000533464 WDR19Q8NEZ3 1342 aa19.23■□□□□ 0.67
PHRF1-205ENST00000533464 PNMA6FA0A0J9YX94 578 aa19.23■□□□□ 0.67
PHRF1-205ENST00000533464 NMT2O60551 498 aa19.23■□□□□ 0.67
PHRF1-205ENST00000533464 KRT15P19012 456 aa19.23■□□□□ 0.67
PHRF1-205ENST00000533464 YWHAEP62258 255 aaKnown RBP19.23■□□□□ 0.67
PHRF1-205ENST00000533464 SYDE2Q5VT97 1194 aa19.23■□□□□ 0.67
PHRF1-205ENST00000533464 NCAPG2Q86XI2 1143 aa19.23■□□□□ 0.67
PHRF1-205ENST00000533464 GOLPH3LQ9H4A5 285 aa19.23■□□□□ 0.67
PHRF1-205ENST00000533464 BZW2Q9Y6E2 419 aaKnown RBP19.23■□□□□ 0.67
PHRF1-205ENST00000533464 COL15A1P39059 1388 aa19.23■□□□□ 0.67
PHRF1-205ENST00000533464 LMTK2Q8IWU2 1503 aa19.23■□□□□ 0.67
PHRF1-205ENST00000533464 HNRNPDLO14979 420 aaKnown RBP19.23■□□□□ 0.67
PHRF1-205ENST00000533464 CLIC2O15247 247 aa19.23■□□□□ 0.67
PHRF1-205ENST00000533464 MMP10P09238 476 aa19.23■□□□□ 0.67
PHRF1-205ENST00000533464 FAM186BQ8IYM0 893 aa19.23■□□□□ 0.67
PHRF1-205ENST00000533464 CPVLQ9H3G5 476 aa19.23■□□□□ 0.67
PHRF1-205ENST00000533464 PARP2Q9UGN5 583 aa19.23■□□□□ 0.67
PHRF1-205ENST00000533464 P4HA1P13674 534 aa19.22■□□□□ 0.67
PHRF1-205ENST00000533464 NPR1P16066 1061 aa19.22■□□□□ 0.67
PHRF1-205ENST00000533464 VPS41P49754 854 aa19.22■□□□□ 0.67
PHRF1-205ENST00000533464 ARID5BQ14865 1188 aa19.22■□□□□ 0.67
PHRF1-205ENST00000533464 PPP2R5EQ16537 467 aa19.22■□□□□ 0.67
PHRF1-205ENST00000533464 CDC37Q16543 378 aaPredicted RBP19.22■□□□□ 0.67
PHRF1-205ENST00000533464 TBC1D9BQ66K14 1250 aa19.22■□□□□ 0.67
PHRF1-205ENST00000533464 GADL1Q6ZQY3 521 aa19.22■□□□□ 0.67
PHRF1-205ENST00000533464 STK36Q9NRP7 1315 aa19.22■□□□□ 0.67
PHRF1-205ENST00000533464 GSG1L2A8MUP6 293 aa19.22■□□□□ 0.67
PHRF1-205ENST00000533464 GAP43P17677 238 aa19.22■□□□□ 0.67
PHRF1-205ENST00000533464 SF3A3Q12874 501 aaKnown RBP eCLIP19.22■□□□□ 0.671e-6■■■■■ 28.7
PHRF1-205ENST00000533464 ALX1Q15699 326 aa19.22■□□□□ 0.67
PHRF1-205ENST00000533464 OXER1Q8TDS5 423 aa19.22■□□□□ 0.67
PHRF1-205ENST00000533464 TMEM47Q9BQJ4 181 aa19.22■□□□□ 0.67
PHRF1-205ENST00000533464 EMILIN3Q9NT22 766 aa19.22■□□□□ 0.67
PHRF1-205ENST00000533464 PSMC2P35998 433 aaKnown RBP19.22■□□□□ 0.67
PHRF1-205ENST00000533464 NT5C2P49902 561 aa19.22■□□□□ 0.67
PHRF1-205ENST00000533464 TBC1D10BQ4KMP7 808 aaPredicted RBP19.22■□□□□ 0.67
PHRF1-205ENST00000533464 SLC44A5Q8NCS7 719 aa19.22■□□□□ 0.67
PHRF1-205ENST00000533464 AFPP02771 609 aaKnown RBP19.22■□□□□ 0.67
PHRF1-205ENST00000533464 MYL7Q01449 175 aa19.22■□□□□ 0.67
PHRF1-205ENST00000533464 TSGA10IPQ3SY00 556 aa19.22■□□□□ 0.67
PHRF1-205ENST00000533464 CCDC89Q8N998 374 aa19.22■□□□□ 0.67
PHRF1-205ENST00000533464 PROCA1Q8NCQ7 364 aaPredicted RBP19.22■□□□□ 0.67
PHRF1-205ENST00000533464 CPDO75976 1380 aa19.22■□□□□ 0.67
PHRF1-205ENST00000533464 INPP5BP32019 993 aa19.21■□□□□ 0.67
PHRF1-205ENST00000533464 AOC3Q16853 763 aa19.21■□□□□ 0.67
PHRF1-205ENST00000533464 NAA35Q5VZE5 725 aa19.21■□□□□ 0.67
PHRF1-205ENST00000533464 FMR1NBQ8N0W7 255 aaPredicted RBP19.21■□□□□ 0.67
PHRF1-205ENST00000533464 NACC1Q96RE7 527 aa19.21■□□□□ 0.67
PHRF1-205ENST00000533464 TBC1D8O95759 1140 aa19.21■□□□□ 0.67
PHRF1-205ENST00000533464 PLA2G4BP0C869 781 aa19.21■□□□□ 0.67
PHRF1-205ENST00000533464 CD209Q9NNX6 404 aa19.21■□□□□ 0.67
PHRF1-205ENST00000533464 ANKFY1Q9P2R3 1169 aa19.21■□□□□ 0.67
PHRF1-205ENST00000533464 GDAQ9Y2T3 454 aa19.21■□□□□ 0.67
PHRF1-205ENST00000533464 STK10O94804 968 aaKnown RBP19.21■□□□□ 0.67
PHRF1-205ENST00000533464 PPM1FP49593 454 aaPredicted RBP19.21■□□□□ 0.67
PHRF1-205ENST00000533464 CACNB3P54284 484 aa19.21■□□□□ 0.67
PHRF1-205ENST00000533464 STOX1Q6ZVD7 989 aa19.21■□□□□ 0.67
PHRF1-205ENST00000533464 SULF1Q8IWU6 871 aa19.21■□□□□ 0.67
PHRF1-205ENST00000533464 PPM1EQ8WY54 764 aa19.21■□□□□ 0.67
PHRF1-205ENST00000533464 ZBED6P86452 979 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms