RNA–Protein interactions for RNA: ENST00000533438.1

CLCF1-202, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCF1, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-202ENST00000533438 PURAQ00577 322 aaKnown RBP13.18□□□□□ -0.3
CLCF1-202ENST00000533438 TRDNQ13061 729 aa13.18□□□□□ -0.3
CLCF1-202ENST00000533438 PPIGQ13427 754 aaKnown RBP eCLIP13.18□□□□□ -0.3
CLCF1-202ENST00000533438 PPP2R5BQ15173 497 aa13.18□□□□□ -0.3
CLCF1-202ENST00000533438 TMEM240Q5SV17 173 aa13.18□□□□□ -0.3
CLCF1-202ENST00000533438 FBXO11Q86XK2 927 aa13.18□□□□□ -0.3
CLCF1-202ENST00000533438 MCF2L2Q86YR7 1114 aa13.18□□□□□ -0.3
CLCF1-202ENST00000533438 TMEM199Q8N511 208 aa13.18□□□□□ -0.3
CLCF1-202ENST00000533438 OR6J1Q8NGC5 347 aa13.18□□□□□ -0.3
CLCF1-202ENST00000533438 SYTL5Q8TDW5 730 aaPredicted RBP13.18□□□□□ -0.3
CLCF1-202ENST00000533438 SCFD2Q8WU76 684 aa13.18□□□□□ -0.3
CLCF1-202ENST00000533438 MAP4K1Q92918 833 aa13.18□□□□□ -0.3
CLCF1-202ENST00000533438 TAAR1Q96RJ0 339 aa13.18□□□□□ -0.3
CLCF1-202ENST00000533438 PPP1R12CQ9BZL4 782 aa13.18□□□□□ -0.3
CLCF1-202ENST00000533438 POLR3EQ9NVU0 708 aa13.18□□□□□ -0.3
CLCF1-202ENST00000533438 MRPL11Q9Y3B7 192 aaKnown RBP13.18□□□□□ -0.3
CLCF1-202ENST00000533438 TAF6LQ9Y6J9 622 aa13.18□□□□□ -0.3
CLCF1-202ENST00000533438 UMODL1Q5DID0 1318 aa13.17□□□□□ -0.3
CLCF1-202ENST00000533438 GBF1Q92538 1859 aa13.17□□□□□ -0.3
CLCF1-202ENST00000533438 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.17□□□□□ -0.3
CLCF1-202ENST00000533438 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.17□□□□□ -0.3
CLCF1-202ENST00000533438 PALM3A6NDB9 673 aaPredicted RBP13.17□□□□□ -0.3
CLCF1-202ENST00000533438 A6NJR5 290 aa13.17□□□□□ -0.3
CLCF1-202ENST00000533438 KLRF2D3W0D1 207 aa13.17□□□□□ -0.3
CLCF1-202ENST00000533438 E7EWF7 191 aa13.17□□□□□ -0.3
CLCF1-202ENST00000533438 OPLAHO14841 1288 aa13.17□□□□□ -0.3
CLCF1-202ENST00000533438 ARIH2O95376 493 aa13.17□□□□□ -0.3
CLCF1-202ENST00000533438 TXNP10599 105 aaKnown RBP13.17□□□□□ -0.3
CLCF1-202ENST00000533438 CYP2C18P33260 490 aa13.17□□□□□ -0.3
CLCF1-202ENST00000533438 GHRHRQ02643 423 aa13.17□□□□□ -0.3
CLCF1-202ENST00000533438 RASIP1Q5U651 963 aa13.17□□□□□ -0.3
CLCF1-202ENST00000533438 STOX1Q6ZVD7 989 aa13.17□□□□□ -0.3
CLCF1-202ENST00000533438 MYLIPQ8WY64 445 aa13.17□□□□□ -0.3
CLCF1-202ENST00000533438 COPS5Q92905 334 aa13.17□□□□□ -0.3
CLCF1-202ENST00000533438 TRPV6Q9H1D0 765 aa13.17□□□□□ -0.3
CLCF1-202ENST00000533438 ALDH8A1Q9H2A2 487 aaPredicted RBP13.17□□□□□ -0.3
CLCF1-202ENST00000533438 HIPK3Q9H422 1215 aa13.17□□□□□ -0.3
CLCF1-202ENST00000533438 VAT1LQ9HCJ6 419 aa13.17□□□□□ -0.3
CLCF1-202ENST00000533438 MYH7BA7E2Y1 1941 aa13.17□□□□□ -0.3
CLCF1-202ENST00000533438 TTC28Q96AY4 2481 aa13.17□□□□□ -0.3
CLCF1-202ENST00000533438 BAZ2BQ9UIF8 2168 aaKnown RBP13.16□□□□□ -0.3
CLCF1-202ENST00000533438 ZBTB5O15062 677 aa13.16□□□□□ -0.3
CLCF1-202ENST00000533438 DHX16O60231 1041 aaKnown RBP13.16□□□□□ -0.3
CLCF1-202ENST00000533438 PPP1R11O60927 126 aaPredicted RBP13.16□□□□□ -0.3
CLCF1-202ENST00000533438 HSD17B4P51659 736 aa13.16□□□□□ -0.3
CLCF1-202ENST00000533438 TTLL4Q14679 1199 aa13.16□□□□□ -0.3
CLCF1-202ENST00000533438 GRM4Q14833 912 aa13.16□□□□□ -0.3
CLCF1-202ENST00000533438 SLC35G1Q2M3R5 365 aa13.16□□□□□ -0.3
CLCF1-202ENST00000533438 CCDC62Q6P9F0 684 aa13.16□□□□□ -0.3
CLCF1-202ENST00000533438 SKAP1Q86WV1 359 aa13.16□□□□□ -0.3
CLCF1-202ENST00000533438 NCOA7Q8NI08 942 aa13.16□□□□□ -0.3
CLCF1-202ENST00000533438 NSUN6Q8TEA1 469 aaKnown RBP13.16□□□□□ -0.3
CLCF1-202ENST00000533438 IWS1Q96ST2 819 aa13.16□□□□□ -0.3
CLCF1-202ENST00000533438 NOC4LQ9BVI4 516 aaKnown RBP13.16□□□□□ -0.3
CLCF1-202ENST00000533438 AMNQ9BXJ7 453 aa13.16□□□□□ -0.3
CLCF1-202ENST00000533438 RIOX1Q9H6W3 641 aa13.16□□□□□ -0.3
CLCF1-202ENST00000533438 SENP2Q9HC62 589 aa13.16□□□□□ -0.3
CLCF1-202ENST00000533438 TANC1Q9C0D5 1861 aa13.16□□□□□ -0.3
CLCF1-202ENST00000533438 SCN5AQ14524 2016 aa13.15□□□□□ -0.3
CLCF1-202ENST00000533438 IFIT3O14879 490 aaKnown RBP13.15□□□□□ -0.3
CLCF1-202ENST00000533438 CFBP00751 764 aa13.15□□□□□ -0.3
CLCF1-202ENST00000533438 MYL3P08590 195 aa13.15□□□□□ -0.3
CLCF1-202ENST00000533438 ACRP10323 421 aa13.15□□□□□ -0.3
CLCF1-202ENST00000533438 ANTXR2P58335 489 aa13.15□□□□□ -0.3
CLCF1-202ENST00000533438 TROAPQ12815 778 aa13.15□□□□□ -0.3
CLCF1-202ENST00000533438 STXBP2Q15833 593 aa13.15□□□□□ -0.3
CLCF1-202ENST00000533438 PSRC1Q6PGN9 363 aaPredicted RBP13.15□□□□□ -0.3
CLCF1-202ENST00000533438 ZNF365Q70YC5 407 aa13.15□□□□□ -0.3
CLCF1-202ENST00000533438 RALYLQ86SE5 291 aaKnown RBP13.15□□□□□ -0.3
CLCF1-202ENST00000533438 MB21D2Q8IYB1 491 aaPredicted RBP13.15□□□□□ -0.3
CLCF1-202ENST00000533438 RMDN3Q96TC7 470 aa13.15□□□□□ -0.3
CLCF1-202ENST00000533438 MTG1Q9BT17 334 aaPredicted RBP13.15□□□□□ -0.3
CLCF1-202ENST00000533438 WNT8AQ9H1J5 351 aa13.15□□□□□ -0.3
CLCF1-202ENST00000533438 IL23AQ9NPF7 189 aa13.15□□□□□ -0.3
CLCF1-202ENST00000533438 PXMP2Q9NR77 195 aa13.15□□□□□ -0.3
CLCF1-202ENST00000533438 MAP3K20Q9NYL2 800 aaKnown RBP13.15□□□□□ -0.3
CLCF1-202ENST00000533438 ERICH2A1L162 156 aa13.14□□□□□ -0.31
CLCF1-202ENST00000533438 CYTH3O43739 400 aa13.14□□□□□ -0.31
CLCF1-202ENST00000533438 KPNA6O60684 536 aa13.14□□□□□ -0.31
CLCF1-202ENST00000533438 FOSL2P15408 326 aa13.14□□□□□ -0.31
CLCF1-202ENST00000533438 DNAJB2P25686 324 aa13.14□□□□□ -0.31
CLCF1-202ENST00000533438 GRIN2CQ14957 1233 aa13.14□□□□□ -0.31
CLCF1-202ENST00000533438 WTAPQ15007 396 aa13.14□□□□□ -0.31
CLCF1-202ENST00000533438 LY6KQ17RY6 165 aa13.14□□□□□ -0.31
CLCF1-202ENST00000533438 NBPF20Q3BBV1 942 aa13.14□□□□□ -0.31
CLCF1-202ENST00000533438 BRDTQ58F21 947 aaPredicted RBP13.14□□□□□ -0.31
CLCF1-202ENST00000533438 CHST3Q7LGC8 479 aa13.14□□□□□ -0.31
CLCF1-202ENST00000533438 SAMD3Q8N6K7 520 aa13.14□□□□□ -0.31
CLCF1-202ENST00000533438 IGDCC4Q8TDY8 1250 aa13.14□□□□□ -0.31
CLCF1-202ENST00000533438 HERVK_113Q902F9 699 aa13.14□□□□□ -0.31
CLCF1-202ENST00000533438 VWCEQ96DN2 955 aa13.14□□□□□ -0.31
CLCF1-202ENST00000533438 GPHNQ9NQX3 736 aaPredicted RBP13.14□□□□□ -0.31
CLCF1-202ENST00000533438 TRMT13Q9NUP7 481 aaKnown RBP13.14□□□□□ -0.31
CLCF1-202ENST00000533438 RBM8AQ9Y5S9 174 aaKnown RBP13.14□□□□□ -0.31
CLCF1-202ENST00000533438 GH1P01241 217 aa13.13□□□□□ -0.31
CLCF1-202ENST00000533438 NR3C2P08235 984 aa13.13□□□□□ -0.31
CLCF1-202ENST00000533438 MMP3P08254 477 aa13.13□□□□□ -0.31
CLCF1-202ENST00000533438 SUPT20HL2P0C7V6 817 aa13.13□□□□□ -0.31
CLCF1-202ENST00000533438 EIF2AK2P19525 551 aaKnown RBP13.13□□□□□ -0.31
CLCF1-202ENST00000533438 CCL23P55773 120 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms