RNA–Protein interactions for RNA: ENST00000533309.5

TRIM3-213, Transcript of tripartite motif containing 3, humanhuman

TSL 2

Gene TRIM3, Length 1,647 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-213ENST00000533309 ZNFX1Q9P2E3 1918 aaKnown RBP18.13■□□□□ 0.49
TRIM3-213ENST00000533309 CYP3A7-CYP3A51PA0A087WV96 503 aa18.12■□□□□ 0.49
TRIM3-213ENST00000533309 TMEM88BA6NKF7 163 aa18.12■□□□□ 0.49
TRIM3-213ENST00000533309 FAM155AB1AL88 458 aaPredicted RBP18.12■□□□□ 0.49
TRIM3-213ENST00000533309 LAD1O00515 517 aa18.12■□□□□ 0.49
TRIM3-213ENST00000533309 CYP3A4P08684 503 aa18.12■□□□□ 0.49
TRIM3-213ENST00000533309 GCFC2P16383 781 aaKnown RBP18.12■□□□□ 0.49
TRIM3-213ENST00000533309 CMA1P23946 247 aa18.12■□□□□ 0.49
TRIM3-213ENST00000533309 CYP3A7P24462 503 aa18.12■□□□□ 0.49
TRIM3-213ENST00000533309 YY1P25490 414 aa18.12■□□□□ 0.49
TRIM3-213ENST00000533309 ARL6IP4Q66PJ3 421 aaKnown RBP18.12■□□□□ 0.49
TRIM3-213ENST00000533309 CAVIN1Q6NZI2 390 aaKnown RBP18.12■□□□□ 0.49
TRIM3-213ENST00000533309 MOXD1Q6UVY6 613 aa18.12■□□□□ 0.49
TRIM3-213ENST00000533309 NSMFQ6X4W1 530 aa18.12■□□□□ 0.49
TRIM3-213ENST00000533309 RNF207Q6ZRF8 634 aa18.12■□□□□ 0.49
TRIM3-213ENST00000533309 FSIP1Q8NA03 581 aa18.12■□□□□ 0.49
TRIM3-213ENST00000533309 ZNF579Q8NAF0 562 aaKnown RBP18.12■□□□□ 0.49
TRIM3-213ENST00000533309 CHST13Q8NET6 341 aa18.12■□□□□ 0.49
TRIM3-213ENST00000533309 FERMT2Q96AC1 680 aa18.12■□□□□ 0.49
TRIM3-213ENST00000533309 MOV10L1Q9BXT6 1211 aaKnown RBP18.12■□□□□ 0.49
TRIM3-213ENST00000533309 CIITAP33076 1130 aa18.12■□□□□ 0.49
TRIM3-213ENST00000533309 PRPHP41219 470 aa18.12■□□□□ 0.49
TRIM3-213ENST00000533309 FSTL1Q12841 308 aa18.12■□□□□ 0.49
TRIM3-213ENST00000533309 BAATQ14032 418 aaPredicted RBP18.12■□□□□ 0.49
TRIM3-213ENST00000533309 RESP18Q5W5W9 173 aa18.12■□□□□ 0.49
TRIM3-213ENST00000533309 ENGASEQ8NFI3 743 aa18.12■□□□□ 0.49
TRIM3-213ENST00000533309 MTMR9Q96QG7 549 aa18.12■□□□□ 0.49
TRIM3-213ENST00000533309 CSRNP2Q9H175 543 aa18.12■□□□□ 0.49
TRIM3-213ENST00000533309 R3HDMLQ9H3Y0 253 aa18.12■□□□□ 0.49
TRIM3-213ENST00000533309 A1CFQ9NQ94 594 aaKnown RBP18.12■□□□□ 0.49
TRIM3-213ENST00000533309 FAM237AA0A1B0GTK4 181 aa18.11■□□□□ 0.49
TRIM3-213ENST00000533309 A0A1B0GVL5 298 aa18.11■□□□□ 0.49
TRIM3-213ENST00000533309 NR1I2O75469 434 aa18.11■□□□□ 0.49
TRIM3-213ENST00000533309 OR52Z1P0C646 297 aa18.11■□□□□ 0.49
TRIM3-213ENST00000533309 Q3C1V9 767 aa18.11■□□□□ 0.49
TRIM3-213ENST00000533309 GTF3C2Q8WUA4 911 aaPredicted RBP18.11■□□□□ 0.49
TRIM3-213ENST00000533309 LENG9Q96B70 501 aa18.11■□□□□ 0.49
TRIM3-213ENST00000533309 HHIPL1Q96JK4 782 aa18.11■□□□□ 0.49
TRIM3-213ENST00000533309 NAP1L4Q99733 375 aaKnown RBP18.11■□□□□ 0.49
TRIM3-213ENST00000533309 MAF1Q9H063 256 aa18.11■□□□□ 0.49
TRIM3-213ENST00000533309 CYP39A1Q9NYL5 469 aa18.11■□□□□ 0.49
TRIM3-213ENST00000533309 DDX25Q9UHL0 483 aaKnown RBP18.11■□□□□ 0.49
TRIM3-213ENST00000533309 ABT1Q9ULW3 272 aaKnown RBP18.11■□□□□ 0.49
TRIM3-213ENST00000533309 VWA3AA6NCI4 1184 aa18.1■□□□□ 0.49
TRIM3-213ENST00000533309 MANSC4A6NHS7 340 aaPredicted RBP18.1■□□□□ 0.49
TRIM3-213ENST00000533309 FAM86B1E9PN63 330 aa18.1■□□□□ 0.49
TRIM3-213ENST00000533309 IGF2BP3O00425 579 aaKnown RBP eCLIP18.1■□□□□ 0.49
TRIM3-213ENST00000533309 FAM86B2P0C5J1 330 aa18.1■□□□□ 0.49
TRIM3-213ENST00000533309 UBXN2AP68543 259 aa18.1■□□□□ 0.49
TRIM3-213ENST00000533309 SNW1Q13573 536 aaKnown RBP18.1■□□□□ 0.49
TRIM3-213ENST00000533309 SPECC1Q5M775 1068 aa18.1■□□□□ 0.49
TRIM3-213ENST00000533309 SMCR8Q8TEV9 937 aaPredicted RBP18.1■□□□□ 0.49
TRIM3-213ENST00000533309 PURBQ96QR8 312 aaKnown RBP18.1■□□□□ 0.49
TRIM3-213ENST00000533309 TAAR1Q96RJ0 339 aa18.1■□□□□ 0.49
TRIM3-213ENST00000533309 EHMT1Q9H9B1 1298 aa18.1■□□□□ 0.49
TRIM3-213ENST00000533309 DACT1Q9NYF0 836 aa18.1■□□□□ 0.49
TRIM3-213ENST00000533309 HPSEQ9Y251 543 aa18.1■□□□□ 0.49
TRIM3-213ENST00000533309 PLXNB2O15031 1838 aa18.09■□□□□ 0.49
TRIM3-213ENST00000533309 PFKFB1P16118 471 aa18.09■□□□□ 0.49
TRIM3-213ENST00000533309 NDUFA8P51970 172 aa18.09■□□□□ 0.49
TRIM3-213ENST00000533309 ERVK-9P63128 1117 aa18.09■□□□□ 0.49
TRIM3-213ENST00000533309 ERVK-24P63145 666 aa18.09■□□□□ 0.49
TRIM3-213ENST00000533309 FAM160A1Q05DH4 1040 aa18.09■□□□□ 0.49
TRIM3-213ENST00000533309 CALCRLQ16602 461 aa18.09■□□□□ 0.49
TRIM3-213ENST00000533309 CCDC73Q6ZRK6 1079 aa18.09■□□□□ 0.49
TRIM3-213ENST00000533309 USP49Q70CQ1 688 aa18.09■□□□□ 0.49
TRIM3-213ENST00000533309 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.09■□□□□ 0.49
TRIM3-213ENST00000533309 FMR1NBQ8N0W7 255 aaPredicted RBP18.09■□□□□ 0.49
TRIM3-213ENST00000533309 IL31RAQ8NI17 732 aa18.09■□□□□ 0.49
TRIM3-213ENST00000533309 FBXO40Q9UH90 709 aa18.09■□□□□ 0.49
TRIM3-213ENST00000533309 IGLV3-22A0A075B6J6 115 aa18.09■□□□□ 0.49
TRIM3-213ENST00000533309 SLC25A27O95847 323 aa18.09■□□□□ 0.49
TRIM3-213ENST00000533309 ERCC3P19447 782 aa18.09■□□□□ 0.49
TRIM3-213ENST00000533309 Q4G0T1 1027 aa18.09■□□□□ 0.49
TRIM3-213ENST00000533309 NCAPG2Q86XI2 1143 aa18.09■□□□□ 0.49
TRIM3-213ENST00000533309 CYP2W1Q8TAV3 490 aa18.09■□□□□ 0.49
TRIM3-213ENST00000533309 HAS1Q92839 578 aa18.09■□□□□ 0.49
TRIM3-213ENST00000533309 PARK7Q99497 189 aaKnown RBP18.09■□□□□ 0.49
TRIM3-213ENST00000533309 GZF1Q9H116 711 aaPredicted RBP18.09■□□□□ 0.49
TRIM3-213ENST00000533309 KCNMB3Q9NPA1 279 aa18.09■□□□□ 0.49
TRIM3-213ENST00000533309 KIAA1217Q5T5P2 1943 aa18.08■□□□□ 0.49
TRIM3-213ENST00000533309 LRRC37A2A6NM11 1700 aa18.08■□□□□ 0.49
TRIM3-213ENST00000533309 GCLCP48506 637 aaPredicted RBP18.08■□□□□ 0.48
TRIM3-213ENST00000533309 DTHD1Q6ZMT9 781 aa18.08■□□□□ 0.48
TRIM3-213ENST00000533309 CCDC102AQ96A19 550 aa18.08■□□□□ 0.48
TRIM3-213ENST00000533309 PXMP2Q9NR77 195 aa18.08■□□□□ 0.48
TRIM3-213ENST00000533309 MORF4L1Q9UBU8 362 aa18.08■□□□□ 0.48
TRIM3-213ENST00000533309 ADGRA2Q96PE1 1338 aa18.07■□□□□ 0.48
TRIM3-213ENST00000533309 EIF2AK2P19525 551 aaKnown RBP18.07■□□□□ 0.48
TRIM3-213ENST00000533309 COPB2P35606 906 aa18.07■□□□□ 0.48
TRIM3-213ENST00000533309 LONP1P36776 959 aaKnown RBP18.07■□□□□ 0.48
TRIM3-213ENST00000533309 PRR16Q569H4 304 aa18.07■□□□□ 0.48
TRIM3-213ENST00000533309 PCNX4Q63HM2 1172 aa18.07■□□□□ 0.48
TRIM3-213ENST00000533309 ETNPPLQ8TBG4 499 aa18.07■□□□□ 0.48
TRIM3-213ENST00000533309 SYMPKQ92797 1274 aaKnown RBP18.07■□□□□ 0.48
TRIM3-213ENST00000533309 EPSTI1Q96J88 318 aa18.07■□□□□ 0.48
TRIM3-213ENST00000533309 RMDN3Q96TC7 470 aa18.07■□□□□ 0.48
TRIM3-213ENST00000533309 PDCD2LQ9BRP1 358 aa18.07■□□□□ 0.48
TRIM3-213ENST00000533309 PORCNQ9H237 461 aa18.07■□□□□ 0.48
TRIM3-213ENST00000533309 ZCCHC17Q9NP64 241 aaKnown RBP18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms