RNA–Protein interactions for RNA: ENST00000533189.1

CTNND1-235, Transcript of catenin delta 1, humanhuman

TSL 3

Gene CTNND1, Length 498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-235ENST00000533189 LCHNA4D1U4 455 aa12.62□□□□□ -0.39
CTNND1-235ENST00000533189 CALML3P27482 149 aa12.62□□□□□ -0.39
CTNND1-235ENST00000533189 WDR5P61964 334 aaKnown RBP12.62□□□□□ -0.39
CTNND1-235ENST00000533189 PTGISQ16647 500 aa12.62□□□□□ -0.39
CTNND1-235ENST00000533189 ALYREFQ86V81 257 aaKnown RBP12.62□□□□□ -0.39
CTNND1-235ENST00000533189 CAGE1Q8TC20 777 aa12.62□□□□□ -0.39
CTNND1-235ENST00000533189 AFAP1L1Q8TED9 768 aa12.62□□□□□ -0.39
CTNND1-235ENST00000533189 SCFD2Q8WU76 684 aa12.62□□□□□ -0.39
CTNND1-235ENST00000533189 DCAF4Q8WV16 495 aa12.62□□□□□ -0.39
CTNND1-235ENST00000533189 CRBNQ96SW2 442 aa12.62□□□□□ -0.39
CTNND1-235ENST00000533189 RANBP17Q9H2T7 1088 aaKnown RBP12.62□□□□□ -0.39
CTNND1-235ENST00000533189 UBE2ZQ9H832 354 aaPredicted RBP12.62□□□□□ -0.39
CTNND1-235ENST00000533189 A6NJR5 290 aa12.61□□□□□ -0.39
CTNND1-235ENST00000533189 PRR33A8MZF0 331 aa12.61□□□□□ -0.39
CTNND1-235ENST00000533189 B4DLN1 442 aa12.61□□□□□ -0.39
CTNND1-235ENST00000533189 NFIBO00712 420 aa12.61□□□□□ -0.39
CTNND1-235ENST00000533189 SSTR3P32745 418 aaPredicted RBP12.61□□□□□ -0.39
CTNND1-235ENST00000533189 MRPL12P52815 198 aaKnown RBP12.61□□□□□ -0.39
CTNND1-235ENST00000533189 SYDE2Q5VT97 1194 aa12.61□□□□□ -0.39
CTNND1-235ENST00000533189 RASGRP2Q7LDG7 609 aa12.61□□□□□ -0.39
CTNND1-235ENST00000533189 UIMC1Q96RL1 719 aa12.61□□□□□ -0.39
CTNND1-235ENST00000533189 TGS1Q96RS0 853 aaKnown RBP12.61□□□□□ -0.39
CTNND1-235ENST00000533189 CD320Q9NPF0 282 aa12.61□□□□□ -0.39
CTNND1-235ENST00000533189 MTUS1Q9ULD2 1270 aa12.61□□□□□ -0.39
CTNND1-235ENST00000533189 RANBP6O60518 1105 aaKnown RBP12.6□□□□□ -0.39
CTNND1-235ENST00000533189 NMT2O60551 498 aa12.6□□□□□ -0.39
CTNND1-235ENST00000533189 PARNO95453 639 aaKnown RBP12.6□□□□□ -0.39
CTNND1-235ENST00000533189 TXNP10599 105 aaKnown RBP12.6□□□□□ -0.39
CTNND1-235ENST00000533189 SELPP16109 830 aa12.6□□□□□ -0.39
CTNND1-235ENST00000533189 SLC16A2P36021 539 aa12.6□□□□□ -0.39
CTNND1-235ENST00000533189 CSPP1Q1MSJ5 1256 aa12.6□□□□□ -0.39
CTNND1-235ENST00000533189 TSHZ3Q63HK5 1081 aa12.6□□□□□ -0.39
CTNND1-235ENST00000533189 CNKSR3Q6P9H4 555 aa12.6□□□□□ -0.39
CTNND1-235ENST00000533189 SLC30A10Q6XR72 485 aa12.6□□□□□ -0.39
CTNND1-235ENST00000533189 RNF207Q6ZRF8 634 aa12.6□□□□□ -0.39
CTNND1-235ENST00000533189 LRRC8DQ7L1W4 858 aa12.6□□□□□ -0.39
CTNND1-235ENST00000533189 TMCO2Q7Z6W1 182 aaPredicted RBP12.6□□□□□ -0.39
CTNND1-235ENST00000533189 FAM178BQ8IXR5 827 aa12.6□□□□□ -0.39
CTNND1-235ENST00000533189 GJD3Q8N144 294 aa12.6□□□□□ -0.39
CTNND1-235ENST00000533189 COPS5Q92905 334 aa12.6□□□□□ -0.39
CTNND1-235ENST00000533189 SEC62Q99442 399 aaKnown RBP12.6□□□□□ -0.39
CTNND1-235ENST00000533189 RAD9AQ99638 391 aa12.6□□□□□ -0.39
CTNND1-235ENST00000533189 IL17RBQ9NRM6 502 aa12.6□□□□□ -0.39
CTNND1-235ENST00000533189 PNMA2Q9UL42 364 aa12.6□□□□□ -0.39
CTNND1-235ENST00000533189 EFCAB14O75071 495 aa12.59□□□□□ -0.39
CTNND1-235ENST00000533189 GJB5O95377 273 aa12.59□□□□□ -0.39
CTNND1-235ENST00000533189 ALADP13716 330 aa12.59□□□□□ -0.39
CTNND1-235ENST00000533189 KCNA5P22460 613 aa12.59□□□□□ -0.39
CTNND1-235ENST00000533189 ERVK-21P61565 698 aa12.59□□□□□ -0.39
CTNND1-235ENST00000533189 DEFB103AP81534 67 aa12.59□□□□□ -0.39
CTNND1-235ENST00000533189 CTDSPL2Q05D32 466 aa12.59□□□□□ -0.39
CTNND1-235ENST00000533189 LEXMQ3ZCV2 418 aa12.59□□□□□ -0.39
CTNND1-235ENST00000533189 TTBK2Q6IQ55 1244 aa12.59□□□□□ -0.39
CTNND1-235ENST00000533189 BTNL9Q6UXG8 535 aa12.59□□□□□ -0.39
CTNND1-235ENST00000533189 DNERQ8NFT8 737 aa12.59□□□□□ -0.39
CTNND1-235ENST00000533189 SUGCTQ9HAC7 445 aa12.59□□□□□ -0.39
CTNND1-235ENST00000533189 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.59□□□□□ -0.393e-9■□□□□ 10.4
CTNND1-235ENST00000533189 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.58□□□□□ -0.4
CTNND1-235ENST00000533189 ABHD14A-ACY1A0A1B0GW23 586 aa12.58□□□□□ -0.4
CTNND1-235ENST00000533189 EDNRBP24530 442 aa12.58□□□□□ -0.4
CTNND1-235ENST00000533189 RPS6P62753 249 aaKnown RBP12.58□□□□□ -0.4
CTNND1-235ENST00000533189 GDF6Q6KF10 455 aaPredicted RBP12.58□□□□□ -0.4
CTNND1-235ENST00000533189 CLEC4DQ8WXI8 215 aa12.58□□□□□ -0.4
CTNND1-235ENST00000533189 FSD1Q9BTV5 496 aa12.58□□□□□ -0.4
CTNND1-235ENST00000533189 GPCPD1Q9NPB8 672 aa12.58□□□□□ -0.4
CTNND1-235ENST00000533189 FRMPD2Q68DX3 1309 aaPredicted RBP12.58□□□□□ -0.4
CTNND1-235ENST00000533189 KIAA1217Q5T5P2 1943 aa12.57□□□□□ -0.4
CTNND1-235ENST00000533189 LINC01553A4QN01 128 aa12.57□□□□□ -0.4
CTNND1-235ENST00000533189 CXCL10P02778 98 aa12.57□□□□□ -0.4
CTNND1-235ENST00000533189 IL9P15248 144 aa12.57□□□□□ -0.4
CTNND1-235ENST00000533189 IKBKEQ14164 716 aa12.57□□□□□ -0.4
CTNND1-235ENST00000533189 PTCRAQ6ISU1 281 aaPredicted RBP12.57□□□□□ -0.4
CTNND1-235ENST00000533189 FAM117BQ6P1L5 589 aa12.57□□□□□ -0.4
CTNND1-235ENST00000533189 SESTD1Q86VW0 696 aa12.57□□□□□ -0.4
CTNND1-235ENST00000533189 FBXO22Q8NEZ5 403 aa12.57□□□□□ -0.4
CTNND1-235ENST00000533189 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.57□□□□□ -0.4
CTNND1-235ENST00000533189 AFG1LQ8WV93 481 aa12.57□□□□□ -0.4
CTNND1-235ENST00000533189 INCENPQ9NQS7 918 aa12.57□□□□□ -0.4
CTNND1-235ENST00000533189 TOMM22Q9NS69 142 aa12.57□□□□□ -0.4
CTNND1-235ENST00000533189 CTNNA3Q9UI47 895 aa12.57□□□□□ -0.4
CTNND1-235ENST00000533189 MICAL3Q7RTP6 2002 aa12.56□□□□□ -0.4
CTNND1-235ENST00000533189 NBNO60934 754 aa12.56□□□□□ -0.4
CTNND1-235ENST00000533189 ARIH2O95376 493 aa12.56□□□□□ -0.4
CTNND1-235ENST00000533189 GH1P01241 217 aa12.56□□□□□ -0.4
CTNND1-235ENST00000533189 MMP3P08254 477 aa12.56□□□□□ -0.4
CTNND1-235ENST00000533189 TOP1P11387 765 aaKnown RBP12.56□□□□□ -0.4
CTNND1-235ENST00000533189 CKBP12277 381 aa12.56□□□□□ -0.4
CTNND1-235ENST00000533189 CASTP20810 708 aaKnown RBP12.56□□□□□ -0.4
CTNND1-235ENST00000533189 MRE11P49959 708 aa12.56□□□□□ -0.4
CTNND1-235ENST00000533189 RBL2Q08999 1139 aa12.56□□□□□ -0.4
CTNND1-235ENST00000533189 GPNMBQ14956 572 aa12.56□□□□□ -0.4
CTNND1-235ENST00000533189 PTPROQ16827 1216 aa12.56□□□□□ -0.4
CTNND1-235ENST00000533189 PUS10Q3MIT2 529 aaKnown RBP12.56□□□□□ -0.4
CTNND1-235ENST00000533189 ZMYM1Q5SVZ6 1142 aa12.56□□□□□ -0.4
CTNND1-235ENST00000533189 CHST3Q7LGC8 479 aa12.56□□□□□ -0.4
CTNND1-235ENST00000533189 C7orf31Q8N865 590 aa12.56□□□□□ -0.4
CTNND1-235ENST00000533189 MYH7BA7E2Y1 1941 aa12.56□□□□□ -0.4
CTNND1-235ENST00000533189 WDR19Q8NEZ3 1342 aa12.56□□□□□ -0.4
CTNND1-235ENST00000533189 GRXCR2A6NFK2 248 aa12.55□□□□□ -0.4
CTNND1-235ENST00000533189 ORC4O43929 436 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms