RNA–Protein interactions for RNA: ENST00000533129.5

CAPN1-224, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CAPN1, Length 2,792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-224ENST00000533129 RGS17Q9UGC6 210 aaPredicted RBP16.43■□□□□ 0.22
CAPN1-224ENST00000533129 MINDY4BA8MYZ0 360 aa16.43■□□□□ 0.22
CAPN1-224ENST00000533129 TBC1D8BQ0IIM8 1120 aa16.43■□□□□ 0.22
CAPN1-224ENST00000533129 CCDC96Q2M329 555 aa16.43■□□□□ 0.22
CAPN1-224ENST00000533129 FAM114A1Q8IWE2 563 aa16.43■□□□□ 0.22
CAPN1-224ENST00000533129 C4orf32Q8N8J7 132 aa16.43■□□□□ 0.22
CAPN1-224ENST00000533129 MIGA1Q8NAN2 632 aa16.43■□□□□ 0.22
CAPN1-224ENST00000533129 TSEN2Q8NCE0 465 aaKnown RBP16.43■□□□□ 0.22
CAPN1-224ENST00000533129 CCDC42Q96M95 316 aa16.43■□□□□ 0.22
CAPN1-224ENST00000533129 PAGR1Q9BTK6 254 aa16.43■□□□□ 0.22
CAPN1-224ENST00000533129 LRP2BPQ9P2M1 347 aa16.43■□□□□ 0.22
CAPN1-224ENST00000533129 HYOU1Q9Y4L1 999 aa16.43■□□□□ 0.22
CAPN1-224ENST00000533129 COL1A1P02452 1464 aaPredicted RBP16.42■□□□□ 0.22
CAPN1-224ENST00000533129 LOC102724159A0A0B4J2E5 919 aa16.42■□□□□ 0.22
CAPN1-224ENST00000533129 NDUFAB1O14561 156 aa16.42■□□□□ 0.22
CAPN1-224ENST00000533129 ZNF263O14978 683 aa16.42■□□□□ 0.22
CAPN1-224ENST00000533129 HNRNPH3P31942 346 aaKnown RBP16.42■□□□□ 0.22
CAPN1-224ENST00000533129 MNAT1P51948 309 aa16.42■□□□□ 0.22
CAPN1-224ENST00000533129 APBA1Q02410 837 aa16.42■□□□□ 0.22
CAPN1-224ENST00000533129 PWP2Q15269 919 aaKnown RBP16.42■□□□□ 0.22
CAPN1-224ENST00000533129 NAALADL2Q58DX5 795 aa16.42■□□□□ 0.22
CAPN1-224ENST00000533129 ARL8AQ96BM9 186 aa16.42■□□□□ 0.22
CAPN1-224ENST00000533129 RBM17Q96I25 401 aaKnown RBP16.42■□□□□ 0.22
CAPN1-224ENST00000533129 ERGIC2Q96RQ1 377 aa16.42■□□□□ 0.22
CAPN1-224ENST00000533129 OSBPL9Q96SU4 736 aa16.42■□□□□ 0.22
CAPN1-224ENST00000533129 LEMD3Q9Y2U8 911 aa16.42■□□□□ 0.22
CAPN1-224ENST00000533129 CAPN6Q9Y6Q1 641 aa16.42■□□□□ 0.22
CAPN1-224ENST00000533129 WTIPA6NIX2 430 aaPredicted RBP16.42■□□□□ 0.22
CAPN1-224ENST00000533129 FSBPO95073 299 aa16.42■□□□□ 0.22
CAPN1-224ENST00000533129 NLRP5P59047 1200 aa16.42■□□□□ 0.22
CAPN1-224ENST00000533129 HAUS3Q68CZ6 603 aa16.42■□□□□ 0.22
CAPN1-224ENST00000533129 IQCA1Q86XH1 822 aa16.42■□□□□ 0.22
CAPN1-224ENST00000533129 CSGALNACT2Q8N6G5 542 aa16.42■□□□□ 0.22
CAPN1-224ENST00000533129 DUSP9Q99956 384 aaKnown RBP16.42■□□□□ 0.22
CAPN1-224ENST00000533129 KIAA0754O94854 1291 aa16.41■□□□□ 0.22
CAPN1-224ENST00000533129 SCG2P13521 617 aa16.41■□□□□ 0.22
CAPN1-224ENST00000533129 HIBADHP31937 336 aaKnown RBP16.41■□□□□ 0.22
CAPN1-224ENST00000533129 GLE1Q53GS7 698 aaKnown RBP16.41■□□□□ 0.22
CAPN1-224ENST00000533129 COL23A1Q86Y22 540 aaPredicted RBP16.41■□□□□ 0.22
CAPN1-224ENST00000533129 ZSCAN29Q8IWY8 852 aaPredicted RBP16.41■□□□□ 0.22
CAPN1-224ENST00000533129 ALS2CR12Q96Q35 445 aa16.41■□□□□ 0.22
CAPN1-224ENST00000533129 IFIH1Q9BYX4 1025 aaKnown RBP16.41■□□□□ 0.22
CAPN1-224ENST00000533129 SAMM50Q9Y512 469 aa16.41■□□□□ 0.22
CAPN1-224ENST00000533129 BICDL2A1A5D9 508 aa16.41■□□□□ 0.22
CAPN1-224ENST00000533129 LCA5LO95447 670 aa16.41■□□□□ 0.22
CAPN1-224ENST00000533129 KLK7P49862 253 aa16.41■□□□□ 0.22
CAPN1-224ENST00000533129 EMC10Q5UCC4 262 aa16.41■□□□□ 0.22
CAPN1-224ENST00000533129 POTEAQ6S8J7 498 aa16.41■□□□□ 0.22
CAPN1-224ENST00000533129 RABEP2Q9H5N1 569 aa16.41■□□□□ 0.22
CAPN1-224ENST00000533129 PCDHA13Q9Y5I0 950 aa16.41■□□□□ 0.22
CAPN1-224ENST00000533129 KLRG2A4D1S0 409 aaPredicted RBP16.4■□□□□ 0.22
CAPN1-224ENST00000533129 PCP11498 1178 aaKnown RBP16.4■□□□□ 0.22
CAPN1-224ENST00000533129 HOXA10P31260 410 aaPredicted RBP16.4■□□□□ 0.22
CAPN1-224ENST00000533129 FNTAP49354 379 aa16.4■□□□□ 0.22
CAPN1-224ENST00000533129 PDCLQ13371 301 aa16.4■□□□□ 0.22
CAPN1-224ENST00000533129 CCDC181Q5TID7 509 aa16.4■□□□□ 0.22
CAPN1-224ENST00000533129 KDM7AQ6ZMT4 941 aa16.4■□□□□ 0.22
CAPN1-224ENST00000533129 YTHDF3Q7Z739 585 aaKnown RBP16.4■□□□□ 0.22
CAPN1-224ENST00000533129 CCDC155Q8N6L0 562 aa16.4■□□□□ 0.22
CAPN1-224ENST00000533129 CNOT6LQ96LI5 555 aaKnown RBP16.4■□□□□ 0.22
CAPN1-224ENST00000533129 KBTBD4Q9NVX7 518 aa16.4■□□□□ 0.22
CAPN1-224ENST00000533129 PLAGL2Q9UPG8 496 aa16.4■□□□□ 0.22
CAPN1-224ENST00000533129 IRS2Q9Y4H2 1338 aa16.4■□□□□ 0.22
CAPN1-224ENST00000533129 MEFVO15553 781 aaPredicted RBP16.4■□□□□ 0.22
CAPN1-224ENST00000533129 CCNE1P24864 410 aa16.4■□□□□ 0.22
CAPN1-224ENST00000533129 KLRK1P26718 216 aa16.4■□□□□ 0.22
CAPN1-224ENST00000533129 SLC7A5Q01650 507 aa16.4■□□□□ 0.22
CAPN1-224ENST00000533129 MICALCLQ6ZW33 695 aa16.4■□□□□ 0.22
CAPN1-224ENST00000533129 SRBD1Q8N5C6 995 aaKnown RBP16.4■□□□□ 0.22
CAPN1-224ENST00000533129 SMCR8Q8TEV9 937 aaPredicted RBP16.4■□□□□ 0.22
CAPN1-224ENST00000533129 SDR42E1Q8WUS8 393 aa16.4■□□□□ 0.22
CAPN1-224ENST00000533129 CABS1Q96KC9 395 aa16.4■□□□□ 0.22
CAPN1-224ENST00000533129 PCMTD1Q96MG8 357 aaPredicted RBP16.4■□□□□ 0.22
CAPN1-224ENST00000533129 ZIM3Q96PE6 472 aa16.4■□□□□ 0.22
CAPN1-224ENST00000533129 HINFPQ9BQA5 517 aa16.4■□□□□ 0.22
CAPN1-224ENST00000533129 A1CFQ9NQ94 594 aaKnown RBP16.4■□□□□ 0.22
CAPN1-224ENST00000533129 ANKIB1Q9P2G1 1089 aa16.4■□□□□ 0.22
CAPN1-224ENST00000533129 NRXN2Q9P2S2 1712 aa16.4■□□□□ 0.22
CAPN1-224ENST00000533129 PAFAH1B1P43034 410 aa16.39■□□□□ 0.21
CAPN1-224ENST00000533129 SETQ01105 290 aaPredicted RBP16.39■□□□□ 0.21
CAPN1-224ENST00000533129 PFKFB3Q16875 520 aaPredicted RBP16.39■□□□□ 0.21
CAPN1-224ENST00000533129 MIIPQ5JXC2 388 aa16.39■□□□□ 0.21
CAPN1-224ENST00000533129 TTC19Q6DKK2 380 aaPredicted RBP16.39■□□□□ 0.21
CAPN1-224ENST00000533129 C8orf74Q6P047 294 aa16.39■□□□□ 0.21
CAPN1-224ENST00000533129 OTUD6BQ8N6M0 293 aa16.39■□□□□ 0.21
CAPN1-224ENST00000533129 P2RX5Q93086 422 aa16.39■□□□□ 0.21
CAPN1-224ENST00000533129 CAPN7Q9Y6W3 813 aa16.39■□□□□ 0.21
CAPN1-224ENST00000533129 MYH1P12882 1939 aa16.39■□□□□ 0.21
CAPN1-224ENST00000533129 FGRP09769 529 aa16.39■□□□□ 0.21
CAPN1-224ENST00000533129 CALML3P27482 149 aa16.39■□□□□ 0.21
CAPN1-224ENST00000533129 PPP1R2P41236 205 aa16.39■□□□□ 0.21
CAPN1-224ENST00000533129 KRT26Q7Z3Y9 468 aa16.39■□□□□ 0.21
CAPN1-224ENST00000533129 CRAMP1Q96RY5 1269 aa16.39■□□□□ 0.21
CAPN1-224ENST00000533129 MLXIPQ9HAP2 919 aa16.39■□□□□ 0.21
CAPN1-224ENST00000533129 ABCF2Q9UG63 623 aa16.39■□□□□ 0.21
CAPN1-224ENST00000533129 BBOX1O75936 387 aa16.38■□□□□ 0.21
CAPN1-224ENST00000533129 MOCS3O95396 460 aa16.38■□□□□ 0.21
CAPN1-224ENST00000533129 CYP7A1P22680 504 aa16.38■□□□□ 0.21
CAPN1-224ENST00000533129 MTIF2P46199 727 aaKnown RBP16.38■□□□□ 0.21
CAPN1-224ENST00000533129 FKBP15Q5T1M5 1219 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms