RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 INHBEP58166 350 aa21.02■□□□□ 0.96
SMPD1-208ENST00000533123 NONOQ15233 471 aaKnown RBP eCLIP21.02■□□□□ 0.96
SMPD1-208ENST00000533123 FCHSD1Q86WN1 690 aa21.02■□□□□ 0.96
SMPD1-208ENST00000533123 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.02■□□□□ 0.96
SMPD1-208ENST00000533123 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.01■□□□□ 0.95
SMPD1-208ENST00000533123 SHC4Q6S5L8 630 aa21.01■□□□□ 0.95
SMPD1-208ENST00000533123 RBM43Q6ZSC3 357 aaKnown RBP21.01■□□□□ 0.95
SMPD1-208ENST00000533123 MCF2L2Q86YR7 1114 aa21.01■□□□□ 0.95
SMPD1-208ENST00000533123 IFNL1Q8IU54 200 aa21.01■□□□□ 0.95
SMPD1-208ENST00000533123 JMYQ8N9B5 988 aa21.01■□□□□ 0.95
SMPD1-208ENST00000533123 TBCKQ8TEA7 893 aa21.01■□□□□ 0.95
SMPD1-208ENST00000533123 PARK7Q99497 189 aaKnown RBP21.01■□□□□ 0.95
SMPD1-208ENST00000533123 KINO60870 393 aaKnown RBP21.01■□□□□ 0.95
SMPD1-208ENST00000533123 PFKFB1P16118 471 aa21.01■□□□□ 0.95
SMPD1-208ENST00000533123 CMA1P23946 247 aa21.01■□□□□ 0.95
SMPD1-208ENST00000533123 HTRA3P83110 453 aa21.01■□□□□ 0.95
SMPD1-208ENST00000533123 NSMFQ6X4W1 530 aa21.01■□□□□ 0.95
SMPD1-208ENST00000533123 RIOX2Q8IUF8 465 aa21.01■□□□□ 0.95
SMPD1-208ENST00000533123 ANKRD13CQ8N6S4 541 aa21.01■□□□□ 0.95
SMPD1-208ENST00000533123 UBE2Q2Q8WVN8 375 aa21.01■□□□□ 0.95
SMPD1-208ENST00000533123 MOV10L1Q9BXT6 1211 aaKnown RBP21.01■□□□□ 0.95
SMPD1-208ENST00000533123 NOL7Q9UMY1 257 aaKnown RBP21.01■□□□□ 0.95
SMPD1-208ENST00000533123 SPDYE3A6NKU9 549 aa21■□□□□ 0.95
SMPD1-208ENST00000533123 GRIN1Q05586 938 aa21■□□□□ 0.95
SMPD1-208ENST00000533123 SREBF2Q12772 1141 aa21■□□□□ 0.95
SMPD1-208ENST00000533123 CAPNS2Q96L46 248 aa21■□□□□ 0.95
SMPD1-208ENST00000533123 R3HDMLQ9H3Y0 253 aa21■□□□□ 0.95
SMPD1-208ENST00000533123 AOC2O75106 756 aa21■□□□□ 0.95
SMPD1-208ENST00000533123 HSD17B4P51659 736 aa21■□□□□ 0.95
SMPD1-208ENST00000533123 RPS6P62753 249 aaKnown RBP21■□□□□ 0.95
SMPD1-208ENST00000533123 ERVK-9P63128 1117 aa21■□□□□ 0.95
SMPD1-208ENST00000533123 ERVK-24P63145 666 aa21■□□□□ 0.95
SMPD1-208ENST00000533123 NCAPG2Q86XI2 1143 aa21■□□□□ 0.95
SMPD1-208ENST00000533123 ANO3Q9BYT9 981 aa21■□□□□ 0.95
SMPD1-208ENST00000533123 ACAD9Q9H845 621 aa21■□□□□ 0.95
SMPD1-208ENST00000533123 AP3B2Q13367 1082 aa20.99■□□□□ 0.95
SMPD1-208ENST00000533123 TKFCQ3LXA3 575 aa20.99■□□□□ 0.95
SMPD1-208ENST00000533123 RNF207Q6ZRF8 634 aa20.99■□□□□ 0.95
SMPD1-208ENST00000533123 KRI1Q8N9T8 703 aaKnown RBP20.99■□□□□ 0.95
SMPD1-208ENST00000533123 GTF3C2Q8WUA4 911 aaPredicted RBP20.99■□□□□ 0.95
SMPD1-208ENST00000533123 COL20A1Q9P218 1284 aa20.99■□□□□ 0.95
SMPD1-208ENST00000533123 FBXO2Q9UK22 296 aaPredicted RBP20.99■□□□□ 0.95
SMPD1-208ENST00000533123 CCDC192P0DO97 292 aa20.98■□□□□ 0.95
SMPD1-208ENST00000533123 ERCC3P19447 782 aa20.98■□□□□ 0.95
SMPD1-208ENST00000533123 TYRO3Q06418 890 aa20.98■□□□□ 0.95
SMPD1-208ENST00000533123 NOGQ13253 232 aa20.98■□□□□ 0.95
SMPD1-208ENST00000533123 ZNF174Q15697 407 aa20.98■□□□□ 0.95
SMPD1-208ENST00000533123 SPECC1Q5M775 1068 aa20.98■□□□□ 0.95
SMPD1-208ENST00000533123 TTC38Q5R3I4 469 aa20.98■□□□□ 0.95
SMPD1-208ENST00000533123 SLC30A10Q6XR72 485 aa20.98■□□□□ 0.95
SMPD1-208ENST00000533123 CUTAO60888 179 aa20.98■□□□□ 0.95
SMPD1-208ENST00000533123 FOSP01100 380 aaPredicted RBP20.98■□□□□ 0.95
SMPD1-208ENST00000533123 TM4SF4P48230 202 aa20.98■□□□□ 0.95
SMPD1-208ENST00000533123 GCLCP48506 637 aaPredicted RBP20.98■□□□□ 0.95
SMPD1-208ENST00000533123 TRAPPC10P48553 1259 aa20.98■□□□□ 0.95
SMPD1-208ENST00000533123 BAATQ14032 418 aaPredicted RBP20.98■□□□□ 0.95
SMPD1-208ENST00000533123 TAF1CQ15572 869 aaPredicted RBP20.98■□□□□ 0.95
SMPD1-208ENST00000533123 LETM2Q2VYF4 491 aa20.98■□□□□ 0.95
SMPD1-208ENST00000533123 NEK8Q86SG6 692 aa20.98■□□□□ 0.95
SMPD1-208ENST00000533123 CHST13Q8NET6 341 aa20.98■□□□□ 0.95
SMPD1-208ENST00000533123 GPRC5AQ8NFJ5 357 aa20.98■□□□□ 0.95
SMPD1-208ENST00000533123 ERCC4Q92889 916 aaPredicted RBP20.98■□□□□ 0.95
SMPD1-208ENST00000533123 GHRHRQ02643 423 aa20.97■□□□□ 0.95
SMPD1-208ENST00000533123 SYTL5Q8TDW5 730 aaPredicted RBP20.97■□□□□ 0.95
SMPD1-208ENST00000533123 PURBQ96QR8 312 aaKnown RBP20.97■□□□□ 0.95
SMPD1-208ENST00000533123 ZCCHC17Q9NP64 241 aaKnown RBP20.97■□□□□ 0.95
SMPD1-208ENST00000533123 A1CFQ9NQ94 594 aaKnown RBP20.97■□□□□ 0.95
SMPD1-208ENST00000533123 EDIL3O43854 480 aa20.97■□□□□ 0.95
SMPD1-208ENST00000533123 RESP18Q5W5W9 173 aa20.97■□□□□ 0.95
SMPD1-208ENST00000533123 MCTP2Q6DN12 878 aa20.97■□□□□ 0.95
SMPD1-208ENST00000533123 TEX2Q8IWB9 1127 aa20.97■□□□□ 0.95
SMPD1-208ENST00000533123 CEP131Q9UPN4 1083 aa20.97■□□□□ 0.95
SMPD1-208ENST00000533123 MYH7BA7E2Y1 1941 aa20.97■□□□□ 0.95
SMPD1-208ENST00000533123 ZNF202O95125 648 aa20.96■□□□□ 0.95
SMPD1-208ENST00000533123 SLC25A27O95847 323 aa20.96■□□□□ 0.95
SMPD1-208ENST00000533123 PTPREP23469 700 aa20.96■□□□□ 0.95
SMPD1-208ENST00000533123 MCM7P33993 719 aa20.96■□□□□ 0.95
SMPD1-208ENST00000533123 PORCNQ9H237 461 aa20.96■□□□□ 0.95
SMPD1-208ENST00000533123 MAP3K20Q9NYL2 800 aaKnown RBP20.96■□□□□ 0.95
SMPD1-208ENST00000533123 HPSEQ9Y251 543 aa20.96■□□□□ 0.95
SMPD1-208ENST00000533123 CCNT1O60563 726 aaKnown RBP20.96■□□□□ 0.95
SMPD1-208ENST00000533123 UBXN2AP68543 259 aa20.96■□□□□ 0.95
SMPD1-208ENST00000533123 WDR78Q5VTH9 848 aa20.96■□□□□ 0.95
SMPD1-208ENST00000533123 ANKRD35Q8N283 1001 aa20.96■□□□□ 0.95
SMPD1-208ENST00000533123 CYP39A1Q9NYL5 469 aa20.96■□□□□ 0.95
SMPD1-208ENST00000533123 CPA4Q9UI42 421 aa20.96■□□□□ 0.95
SMPD1-208ENST00000533123 EFCC1Q9HA90 598 aa20.95■□□□□ 0.94
SMPD1-208ENST00000533123 MORF4L1Q9UBU8 362 aa20.95■□□□□ 0.94
SMPD1-208ENST00000533123 FBXO40Q9UH90 709 aa20.95■□□□□ 0.94
SMPD1-208ENST00000533123 CTAGE5O15320 804 aa20.94■□□□□ 0.94
SMPD1-208ENST00000533123 SREBF1P36956 1147 aa20.94■□□□□ 0.94
SMPD1-208ENST00000533123 ARHGAP4P98171 946 aa20.94■□□□□ 0.94
SMPD1-208ENST00000533123 SAMD3Q8N6K7 520 aa20.94■□□□□ 0.94
SMPD1-208ENST00000533123 TAAR1Q96RJ0 339 aa20.94■□□□□ 0.94
SMPD1-208ENST00000533123 SDF4Q9BRK5 362 aa20.94■□□□□ 0.94
SMPD1-208ENST00000533123 RBBP6Q7Z6E9 1792 aaKnown RBP20.94■□□□□ 0.94
SMPD1-208ENST00000533123 TDP2O95551 362 aa20.94■□□□□ 0.94
SMPD1-208ENST00000533123 SYKP43405 635 aa20.94■□□□□ 0.94
SMPD1-208ENST00000533123 CRYGNQ8WXF5 182 aa20.94■□□□□ 0.94
SMPD1-208ENST00000533123 SRPRBQ9Y5M8 271 aaKnown RBP20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms