RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 BCORL1Q5H9F3 1711 aa16.2■□□□□ 0.18
PCDHA9-202ENST00000532602 NOL3O60936 208 aaKnown RBP16.2■□□□□ 0.18
PCDHA9-202ENST00000532602 GPSM2P81274 684 aa16.2■□□□□ 0.18
PCDHA9-202ENST00000532602 NKX1-1Q15270 411 aaPredicted RBP16.2■□□□□ 0.18
PCDHA9-202ENST00000532602 FAM26FQ5R3K3 315 aa16.2■□□□□ 0.18
PCDHA9-202ENST00000532602 RETREG2Q8NC44 543 aa16.2■□□□□ 0.18
PCDHA9-202ENST00000532602 SLC7A3Q8WY07 619 aa16.2■□□□□ 0.18
PCDHA9-202ENST00000532602 RGS12O14924 1447 aa16.2■□□□□ 0.18
PCDHA9-202ENST00000532602 NR5A1Q13285 461 aa16.2■□□□□ 0.18
PCDHA9-202ENST00000532602 MTMR3Q13615 1198 aa16.2■□□□□ 0.18
PCDHA9-202ENST00000532602 KIAA1468Q9P260 1216 aa16.2■□□□□ 0.18
PCDHA9-202ENST00000532602 SH2B2O14492 632 aaPredicted RBP16.2■□□□□ 0.18
PCDHA9-202ENST00000532602 GTPBP6O43824 516 aaPredicted RBP16.2■□□□□ 0.18
PCDHA9-202ENST00000532602 GRAMD1CQ8IYS0 662 aa16.2■□□□□ 0.18
PCDHA9-202ENST00000532602 GJA10Q969M2 543 aa16.2■□□□□ 0.18
PCDHA9-202ENST00000532602 RAB20Q9NX57 234 aa16.2■□□□□ 0.18
PCDHA9-202ENST00000532602 PFDN6O15212 129 aa16.2■□□□□ 0.18
PCDHA9-202ENST00000532602 KRT81Q14533 505 aa16.2■□□□□ 0.18
PCDHA9-202ENST00000532602 CD2BP2O95400 341 aaKnown RBP16.2■□□□□ 0.18
PCDHA9-202ENST00000532602 CDC25AP30304 524 aa16.2■□□□□ 0.18
PCDHA9-202ENST00000532602 TRAPPC10P48553 1259 aa16.2■□□□□ 0.18
PCDHA9-202ENST00000532602 CPSF1Q10570 1443 aaKnown RBP16.19■□□□□ 0.18
PCDHA9-202ENST00000532602 STAM2O75886 525 aa16.19■□□□□ 0.18
PCDHA9-202ENST00000532602 MARK3P27448 753 aa16.19■□□□□ 0.18
PCDHA9-202ENST00000532602 CCND2P30279 289 aa16.19■□□□□ 0.18
PCDHA9-202ENST00000532602 NT5C2P49902 561 aa16.19■□□□□ 0.18
PCDHA9-202ENST00000532602 LRRC41Q15345 812 aa16.19■□□□□ 0.18
PCDHA9-202ENST00000532602 SMYD4Q8IYR2 804 aaPredicted RBP16.19■□□□□ 0.18
PCDHA9-202ENST00000532602 WDR11Q9BZH6 1224 aa16.19■□□□□ 0.18
PCDHA9-202ENST00000532602 RAB17Q9H0T7 212 aa16.19■□□□□ 0.18
PCDHA9-202ENST00000532602 CACYBPQ9HB71 228 aaKnown RBP16.19■□□□□ 0.18
PCDHA9-202ENST00000532602 PRKAG2Q9UGJ0 569 aa16.19■□□□□ 0.18
PCDHA9-202ENST00000532602 NOC2LQ9Y3T9 749 aaKnown RBP16.19■□□□□ 0.18
PCDHA9-202ENST00000532602 A0A087WWV3 80 aa16.19■□□□□ 0.18
PCDHA9-202ENST00000532602 TLR3O15455 904 aaKnown RBP16.19■□□□□ 0.18
PCDHA9-202ENST00000532602 GCFC2P16383 781 aaKnown RBP16.19■□□□□ 0.18
PCDHA9-202ENST00000532602 CHRNA5P30532 468 aa16.19■□□□□ 0.18
PCDHA9-202ENST00000532602 ABCD1P33897 745 aa16.19■□□□□ 0.18
PCDHA9-202ENST00000532602 PDE6CP51160 858 aa16.19■□□□□ 0.18
PCDHA9-202ENST00000532602 LACTBP83111 547 aaPredicted RBP16.19■□□□□ 0.18
PCDHA9-202ENST00000532602 SCYL2Q6P3W7 929 aa16.19■□□□□ 0.18
PCDHA9-202ENST00000532602 KRBA2Q6ZNG9 492 aa16.19■□□□□ 0.18
PCDHA9-202ENST00000532602 OR8K1Q8NGG5 319 aa16.19■□□□□ 0.18
PCDHA9-202ENST00000532602 POMGNT1Q8WZA1 660 aa16.19■□□□□ 0.18
PCDHA9-202ENST00000532602 STMN2Q93045 179 aa16.19■□□□□ 0.18
PCDHA9-202ENST00000532602 AIFM3Q96NN9 605 aa16.19■□□□□ 0.18
PCDHA9-202ENST00000532602 MAP7Q14244 749 aa16.19■□□□□ 0.18
PCDHA9-202ENST00000532602 HHATQ5VTY9 493 aa16.19■□□□□ 0.18
PCDHA9-202ENST00000532602 P3H4Q92791 437 aa16.19■□□□□ 0.18
PCDHA9-202ENST00000532602 CUEDC2Q9H467 287 aa16.19■□□□□ 0.18
PCDHA9-202ENST00000532602 IREB2P48200 963 aaKnown RBP16.19■□□□□ 0.18
PCDHA9-202ENST00000532602 CUL4BQ13620 913 aa16.19■□□□□ 0.18
PCDHA9-202ENST00000532602 SYNJ2BP-COX16A0A087WUM0 186 aa16.19■□□□□ 0.18
PCDHA9-202ENST00000532602 GH2P01242 217 aa16.19■□□□□ 0.18
PCDHA9-202ENST00000532602 BPIFB4P59827 614 aa16.19■□□□□ 0.18
PCDHA9-202ENST00000532602 RBM6P78332 1123 aaKnown RBP16.19■□□□□ 0.18
PCDHA9-202ENST00000532602 CDC37Q16543 378 aaPredicted RBP16.19■□□□□ 0.18
PCDHA9-202ENST00000532602 CLEC4GQ6UXB4 293 aa16.19■□□□□ 0.18
PCDHA9-202ENST00000532602 RSAD2Q8WXG1 361 aa16.19■□□□□ 0.18
PCDHA9-202ENST00000532602 SLC10A4Q96EP9 437 aa16.19■□□□□ 0.18
PCDHA9-202ENST00000532602 RPGRIP1Q96KN7 1286 aa16.19■□□□□ 0.18
PCDHA9-202ENST00000532602 COX16Q9P0S2 106 aa16.19■□□□□ 0.18
PCDHA9-202ENST00000532602 ZHX1Q9UKY1 873 aaPredicted RBP16.19■□□□□ 0.18
PCDHA9-202ENST00000532602 PIK3CAP42336 1068 aa16.18■□□□□ 0.18
PCDHA9-202ENST00000532602 MUM1L1Q5H9M0 696 aa16.18■□□□□ 0.18
PCDHA9-202ENST00000532602 NSUN7Q8NE18 718 aaKnown RBP16.18■□□□□ 0.18
PCDHA9-202ENST00000532602 TACC3Q9Y6A5 838 aa16.18■□□□□ 0.18
PCDHA9-202ENST00000532602 CRB1P82279 1406 aa16.18■□□□□ 0.18
PCDHA9-202ENST00000532602 ARHGEF37A1IGU5 675 aa16.18■□□□□ 0.18
PCDHA9-202ENST00000532602 PLEKHA8P1O95397 391 aa16.18■□□□□ 0.18
PCDHA9-202ENST00000532602 LARGE1O95461 756 aa16.18■□□□□ 0.18
PCDHA9-202ENST00000532602 CMA1P23946 247 aa16.18■□□□□ 0.18
PCDHA9-202ENST00000532602 TXNRD1Q16881 649 aa16.18■□□□□ 0.18
PCDHA9-202ENST00000532602 PI4K2BQ8TCG2 481 aa16.18■□□□□ 0.18
PCDHA9-202ENST00000532602 NACC1Q96RE7 527 aa16.18■□□□□ 0.18
PCDHA9-202ENST00000532602 I3L4J1 428 aa16.18■□□□□ 0.18
PCDHA9-202ENST00000532602 NMT2O60551 498 aa16.18■□□□□ 0.18
PCDHA9-202ENST00000532602 PPP2R5CQ13362 524 aa16.18■□□□□ 0.18
PCDHA9-202ENST00000532602 ZNF521Q96K83 1311 aa16.18■□□□□ 0.18
PCDHA9-202ENST00000532602 CPDO75976 1380 aa16.18■□□□□ 0.18
PCDHA9-202ENST00000532602 CYP2E1P05181 493 aaPredicted RBP16.18■□□□□ 0.18
PCDHA9-202ENST00000532602 ADAM9Q13443 819 aa16.18■□□□□ 0.18
PCDHA9-202ENST00000532602 ODR4Q5SWX8 454 aa16.18■□□□□ 0.18
PCDHA9-202ENST00000532602 CPVLQ9H3G5 476 aa16.18■□□□□ 0.18
PCDHA9-202ENST00000532602 RNF26Q9BY78 433 aaPredicted RBP16.18■□□□□ 0.18
PCDHA9-202ENST00000532602 PCIF1Q9H4Z3 704 aa16.18■□□□□ 0.18
PCDHA9-202ENST00000532602 OVOS2A0A0G2JMS6 1433 aa16.17■□□□□ 0.18
PCDHA9-202ENST00000532602 OVOS2A0A0J9YW53 1432 aa16.17■□□□□ 0.18
PCDHA9-202ENST00000532602 OVOS2Q6IE36 1432 aa16.17■□□□□ 0.18
PCDHA9-202ENST00000532602 BUB1O43683 1085 aa16.17■□□□□ 0.18
PCDHA9-202ENST00000532602 SDCCAG8Q86SQ7 713 aaPredicted RBP16.17■□□□□ 0.18
PCDHA9-202ENST00000532602 RIC8AQ9NPQ8 531 aa16.17■□□□□ 0.18
PCDHA9-202ENST00000532602 NRKQ7Z2Y5 1582 aa16.17■□□□□ 0.18
PCDHA9-202ENST00000532602 POLR2FP61218 127 aaKnown RBP16.17■□□□□ 0.18
PCDHA9-202ENST00000532602 KRT15P19012 456 aa16.17■□□□□ 0.18
PCDHA9-202ENST00000532602 HPDP32754 393 aaPredicted RBP16.17■□□□□ 0.18
PCDHA9-202ENST00000532602 MIS18BP1Q6P0N0 1132 aa16.17■□□□□ 0.18
PCDHA9-202ENST00000532602 GRK7Q8WTQ7 553 aa16.17■□□□□ 0.18
PCDHA9-202ENST00000532602 NCAPD2Q15021 1401 aa16.17■□□□□ 0.18
PCDHA9-202ENST00000532602 RIMBP3CA6NJZ7 1639 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms