RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 GPR161Q8N6U8 529 aaKnown RBP12.43□□□□□ -0.42
PTPRK-221ENST00000532331 CAPN9O14815 690 aa12.43□□□□□ -0.42
PTPRK-221ENST00000532331 RNF146Q9NTX7 359 aa12.43□□□□□ -0.42
PTPRK-221ENST00000532331 TAB2Q9NYJ8 693 aa12.43□□□□□ -0.42
PTPRK-221ENST00000532331 NRXN1Q9ULB1 1477 aa12.43□□□□□ -0.42
PTPRK-221ENST00000532331 SMIM23A6NLE4 172 aa12.43□□□□□ -0.42
PTPRK-221ENST00000532331 ERCC3P19447 782 aa12.43□□□□□ -0.42
PTPRK-221ENST00000532331 MARK3P27448 753 aa12.43□□□□□ -0.42
PTPRK-221ENST00000532331 ZBTB16Q05516 673 aa12.43□□□□□ -0.42
PTPRK-221ENST00000532331 TMTC1Q8IUR5 882 aa12.43□□□□□ -0.42
PTPRK-221ENST00000532331 TRMT2AQ8IZ69 625 aaKnown RBP12.43□□□□□ -0.42
PTPRK-221ENST00000532331 RAB3IL1Q8TBN0 382 aa12.43□□□□□ -0.42
PTPRK-221ENST00000532331 RBM46Q8TBY0 533 aaKnown RBP12.43□□□□□ -0.42
PTPRK-221ENST00000532331 TBCKQ8TEA7 893 aa12.43□□□□□ -0.42
PTPRK-221ENST00000532331 LSG1Q9H089 658 aaKnown RBP12.43□□□□□ -0.42
PTPRK-221ENST00000532331 ZSWIM5Q9P217 1185 aa12.43□□□□□ -0.42
PTPRK-221ENST00000532331 IVLP07476 585 aa12.43□□□□□ -0.42
PTPRK-221ENST00000532331 LONP1P36776 959 aaKnown RBP12.43□□□□□ -0.42
PTPRK-221ENST00000532331 ZNF75DP51815 510 aa12.43□□□□□ -0.42
PTPRK-221ENST00000532331 TTLL4Q14679 1199 aa12.43□□□□□ -0.42
PTPRK-221ENST00000532331 CCDC84Q86UT8 332 aaPredicted RBP12.43□□□□□ -0.42
PTPRK-221ENST00000532331 RMDN3Q96TC7 470 aa12.43□□□□□ -0.42
PTPRK-221ENST00000532331 FAM49AQ9H0Q0 323 aaPredicted RBP12.43□□□□□ -0.42
PTPRK-221ENST00000532331 FAM204AQ9H8W3 233 aa12.43□□□□□ -0.42
PTPRK-221ENST00000532331 N4BP1O75113 896 aaKnown RBP12.42□□□□□ -0.42
PTPRK-221ENST00000532331 FDX1P10109 184 aa12.42□□□□□ -0.42
PTPRK-221ENST00000532331 DLATP10515 647 aaKnown RBP12.42□□□□□ -0.42
PTPRK-221ENST00000532331 LRMPQ12912 555 aa12.42□□□□□ -0.42
PTPRK-221ENST00000532331 RCSD1Q6JBY9 416 aa12.42□□□□□ -0.42
PTPRK-221ENST00000532331 KMT5AQ9NQR1 393 aa12.42□□□□□ -0.42
PTPRK-221ENST00000532331 C1orf112Q9NSG2 853 aa12.42□□□□□ -0.42
PTPRK-221ENST00000532331 SERTAD1Q9UHV2 236 aa12.42□□□□□ -0.42
PTPRK-221ENST00000532331 TPCN1Q9ULQ1 816 aa12.42□□□□□ -0.42
PTPRK-221ENST00000532331 E7EVH7 732 aa12.42□□□□□ -0.42
PTPRK-221ENST00000532331 HMGCS2P54868 508 aa12.42□□□□□ -0.42
PTPRK-221ENST00000532331 C7orf31Q8N865 590 aa12.42□□□□□ -0.42
PTPRK-221ENST00000532331 RASGRP4Q8TDF6 673 aa12.42□□□□□ -0.42
PTPRK-221ENST00000532331 PREX1Q8TCU6 1659 aa12.42□□□□□ -0.42
PTPRK-221ENST00000532331 MST1RQ04912 1400 aa12.42□□□□□ -0.42
PTPRK-221ENST00000532331 DTNBO60941 627 aa12.42□□□□□ -0.42
PTPRK-221ENST00000532331 XRCC5P13010 732 aaKnown RBP12.42□□□□□ -0.42
PTPRK-221ENST00000532331 PTGDRQ13258 359 aa12.42□□□□□ -0.42
PTPRK-221ENST00000532331 ADALQ6DHV7 355 aa12.42□□□□□ -0.42
PTPRK-221ENST00000532331 NSUN6Q8TEA1 469 aaKnown RBP12.42□□□□□ -0.42
PTPRK-221ENST00000532331 ABCD1P33897 745 aa12.42□□□□□ -0.42
PTPRK-221ENST00000532331 TRAPPC10P48553 1259 aa12.42□□□□□ -0.42
PTPRK-221ENST00000532331 GABPAQ06546 454 aa12.42□□□□□ -0.42
PTPRK-221ENST00000532331 UBE2SQ16763 222 aa12.42□□□□□ -0.42
PTPRK-221ENST00000532331 OSBPL3Q9H4L5 887 aa12.42□□□□□ -0.42
PTPRK-221ENST00000532331 MYOZ2Q9NPC6 264 aa12.42□□□□□ -0.42
PTPRK-221ENST00000532331 PPP2R3AQ06190 1150 aa12.41□□□□□ -0.42
PTPRK-221ENST00000532331 ARHGAP44Q17R89 818 aa12.41□□□□□ -0.42
PTPRK-221ENST00000532331 SND1Q7KZF4 910 aaKnown RBP eCLIP12.41□□□□□ -0.425e-6■□□□□ 9.5
PTPRK-221ENST00000532331 PRPF38AQ8NAV1 312 aaKnown RBP12.41□□□□□ -0.42
PTPRK-221ENST00000532331 SECISBP2LQ93073 1101 aaKnown RBP12.41□□□□□ -0.42
PTPRK-221ENST00000532331 SH2B2O14492 632 aaPredicted RBP12.41□□□□□ -0.42
PTPRK-221ENST00000532331 GADD45BO75293 160 aaPredicted RBP12.41□□□□□ -0.42
PTPRK-221ENST00000532331 NFX1Q12986 1120 aaKnown RBP12.41□□□□□ -0.42
PTPRK-221ENST00000532331 UBLCP1Q8WVY7 318 aaPredicted RBP12.41□□□□□ -0.42
PTPRK-221ENST00000532331 PPP1R16BQ96T49 567 aa12.41□□□□□ -0.42
PTPRK-221ENST00000532331 PLA2G12BQ9BX93 195 aa12.41□□□□□ -0.42
PTPRK-221ENST00000532331 RPAP3Q9H6T3 665 aaPredicted RBP12.41□□□□□ -0.42
PTPRK-221ENST00000532331 ACAD9Q9H845 621 aa12.41□□□□□ -0.42
PTPRK-221ENST00000532331 ACTN4O43707 911 aaKnown RBP12.41□□□□□ -0.42
PTPRK-221ENST00000532331 BRD1O95696 1058 aa12.41□□□□□ -0.42
PTPRK-221ENST00000532331 STAT3P40763 770 aa12.41□□□□□ -0.42
PTPRK-221ENST00000532331 IQCDQ96DY2 449 aa12.41□□□□□ -0.42
PTPRK-221ENST00000532331 ANKRD36BP1Q96IX9 119 aa12.41□□□□□ -0.42
PTPRK-221ENST00000532331 SMC6Q96SB8 1091 aa12.41□□□□□ -0.42
PTPRK-221ENST00000532331 NUCKS1Q9H1E3 243 aaKnown RBP12.41□□□□□ -0.42
PTPRK-221ENST00000532331 KCNK9Q9NPC2 374 aa12.41□□□□□ -0.42
PTPRK-221ENST00000532331 ZNF70Q9UC06 446 aaPredicted RBP12.41□□□□□ -0.42
PTPRK-221ENST00000532331 FOXO4P98177 505 aa12.41□□□□□ -0.42
PTPRK-221ENST00000532331 PRDM5Q9NQX1 630 aaPredicted RBP12.41□□□□□ -0.42
PTPRK-221ENST00000532331 CTTNBP2NLQ9P2B4 639 aa12.41□□□□□ -0.42
PTPRK-221ENST00000532331 ABCB11O95342 1321 aa12.41□□□□□ -0.42
PTPRK-221ENST00000532331 DCP1AQ9NPI6 582 aaPredicted RBP12.41□□□□□ -0.42
PTPRK-221ENST00000532331 ASB14A6NK59 587 aa12.4□□□□□ -0.42
PTPRK-221ENST00000532331 ALDH3A1P30838 453 aa12.4□□□□□ -0.42
PTPRK-221ENST00000532331 MAGEA1P43355 309 aa12.4□□□□□ -0.42
PTPRK-221ENST00000532331 ZNF445P59923 1031 aa12.4□□□□□ -0.42
PTPRK-221ENST00000532331 KLHL30Q0D2K2 578 aa12.4□□□□□ -0.42
PTPRK-221ENST00000532331 NKX1-1Q15270 411 aaPredicted RBP12.4□□□□□ -0.42
PTPRK-221ENST00000532331 ZNF365Q70YC5 407 aa12.4□□□□□ -0.42
PTPRK-221ENST00000532331 CETPP11597 493 aa12.4□□□□□ -0.42
PTPRK-221ENST00000532331 ELF1P32519 619 aa12.4□□□□□ -0.42
PTPRK-221ENST00000532331 ARPP19P56211 112 aa12.4□□□□□ -0.42
PTPRK-221ENST00000532331 EVCP57679 992 aa12.4□□□□□ -0.42
PTPRK-221ENST00000532331 HDXQ7Z353 690 aa12.4□□□□□ -0.42
PTPRK-221ENST00000532331 TICAM2Q86XR7 235 aa12.4□□□□□ -0.42
PTPRK-221ENST00000532331 CACTINQ8WUQ7 758 aaKnown RBP12.4□□□□□ -0.42
PTPRK-221ENST00000532331 CCDC127Q96BQ5 260 aa12.4□□□□□ -0.42
PTPRK-221ENST00000532331 NTSR2O95665 410 aa12.4□□□□□ -0.42
PTPRK-221ENST00000532331 SFMBT2Q5VUG0 894 aa12.4□□□□□ -0.42
PTPRK-221ENST00000532331 C8orf74Q6P047 294 aa12.4□□□□□ -0.42
PTPRK-221ENST00000532331 FAM167AQ96KS9 214 aa12.4□□□□□ -0.42
PTPRK-221ENST00000532331 FOXP1Q9H334 677 aaPredicted RBP12.4□□□□□ -0.42
PTPRK-221ENST00000532331 USTQ9Y2C2 406 aa12.4□□□□□ -0.42
PTPRK-221ENST00000532331 KBTBD13C9JR72 458 aa12.4□□□□□ -0.42
PTPRK-221ENST00000532331 ATP5DP30049 168 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms