RNA–Protein interactions for RNA: ENST00000532285.1

CAPN1-222, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-222ENST00000532285 APOA5Q6Q788 366 aa26.59■■□□□ 1.85
CAPN1-222ENST00000532285 MICU3Q86XE3 530 aa26.59■■□□□ 1.85
CAPN1-222ENST00000532285 SRBD1Q8N5C6 995 aaKnown RBP26.59■■□□□ 1.85
CAPN1-222ENST00000532285 STARD7Q9NQZ5 370 aa26.59■■□□□ 1.85
CAPN1-222ENST00000532285 SEC63Q9UGP8 760 aaKnown RBP26.59■■□□□ 1.85
CAPN1-222ENST00000532285 STXBP2Q15833 593 aa26.58■■□□□ 1.85
CAPN1-222ENST00000532285 FSCN1Q16658 493 aaKnown RBP26.58■■□□□ 1.85
CAPN1-222ENST00000532285 RAB11FIP4Q86YS3 637 aa26.58■■□□□ 1.85
CAPN1-222ENST00000532285 SCFD2Q8WU76 684 aa26.58■■□□□ 1.85
CAPN1-222ENST00000532285 GLT1D1Q96MS3 346 aa26.58■■□□□ 1.85
CAPN1-222ENST00000532285 JAKMIP1Q96N16 626 aaKnown RBP26.58■■□□□ 1.85
CAPN1-222ENST00000532285 PRO3102Q9H379 93 aa26.58■■□□□ 1.85
CAPN1-222ENST00000532285 ELP1O95163 1332 aa26.58■■□□□ 1.85
CAPN1-222ENST00000532285 GCOM1H8Y6P7 765 aaPredicted RBP26.57■■□□□ 1.84
CAPN1-222ENST00000532285 POLR2MP0CAP2 368 aa26.57■■□□□ 1.84
CAPN1-222ENST00000532285 FGD1P98174 961 aa26.57■■□□□ 1.84
CAPN1-222ENST00000532285 BEX3Q00994 111 aa26.57■■□□□ 1.84
CAPN1-222ENST00000532285 TMEM63BQ5T3F8 832 aa26.57■■□□□ 1.84
CAPN1-222ENST00000532285 PXMP2Q9NR77 195 aa26.57■■□□□ 1.84
CAPN1-222ENST00000532285 RBM27Q9P2N5 1060 aaKnown RBP26.57■■□□□ 1.84
CAPN1-222ENST00000532285 PRKAG2Q9UGJ0 569 aa26.57■■□□□ 1.84
CAPN1-222ENST00000532285 NKRFO15226 690 aaKnown RBP eCLIP26.56■■□□□ 1.84
CAPN1-222ENST00000532285 ZBTB43O43298 467 aa26.56■■□□□ 1.84
CAPN1-222ENST00000532285 ZEB2O60315 1214 aa26.56■■□□□ 1.84
CAPN1-222ENST00000532285 PSMA5P28066 241 aa26.56■■□□□ 1.84
CAPN1-222ENST00000532285 BLOC1S2Q6QNY1 142 aa26.56■■□□□ 1.84
CAPN1-222ENST00000532285 TMTC3Q6ZXV5 915 aa26.56■■□□□ 1.84
CAPN1-222ENST00000532285 CMTR1Q8N1G2 835 aaKnown RBP26.56■■□□□ 1.84
CAPN1-222ENST00000532285 GDF15Q99988 308 aa26.56■■□□□ 1.84
CAPN1-222ENST00000532285 RBM28Q9NW13 759 aaKnown RBP26.56■■□□□ 1.84
CAPN1-222ENST00000532285 BRPF3Q9ULD4 1205 aa26.56■■□□□ 1.84
CAPN1-222ENST00000532285 RANBP2P49792 3224 aaKnown RBP26.56■■□□□ 1.84
CAPN1-222ENST00000532285 EIF2AK2P19525 551 aaKnown RBP26.55■■□□□ 1.84
CAPN1-222ENST00000532285 HOXA13P31271 388 aaPredicted RBP26.55■■□□□ 1.84
CAPN1-222ENST00000532285 PPP2R5BQ15173 497 aa26.55■■□□□ 1.84
CAPN1-222ENST00000532285 VTI1AQ96AJ9 217 aa26.55■■□□□ 1.84
CAPN1-222ENST00000532285 USP26Q9BXU7 913 aa26.55■■□□□ 1.84
CAPN1-222ENST00000532285 CABYRO75952 493 aa26.54■■□□□ 1.84
CAPN1-222ENST00000532285 NR3C2P08235 984 aa26.54■■□□□ 1.84
CAPN1-222ENST00000532285 CPA1P15085 419 aa26.54■■□□□ 1.84
CAPN1-222ENST00000532285 PTGS1P23219 599 aa26.54■■□□□ 1.84
CAPN1-222ENST00000532285 BMP8BP34820 402 aa26.54■■□□□ 1.84
CAPN1-222ENST00000532285 MAGEA10P43363 369 aaPredicted RBP26.54■■□□□ 1.84
CAPN1-222ENST00000532285 TLE2Q04725 743 aa26.54■■□□□ 1.84
CAPN1-222ENST00000532285 TTLL4Q14679 1199 aa26.54■■□□□ 1.84
CAPN1-222ENST00000532285 LTBP2Q14767 1821 aa26.53■■□□□ 1.84
CAPN1-222ENST00000532285 KLF18A0A0U1RQI7 1052 aa26.53■■□□□ 1.84
CAPN1-222ENST00000532285 EIF3JO75822 258 aaKnown RBP26.53■■□□□ 1.84
CAPN1-222ENST00000532285 TXNP10599 105 aaKnown RBP26.53■■□□□ 1.84
CAPN1-222ENST00000532285 RCAN1P53805 252 aa26.53■■□□□ 1.84
CAPN1-222ENST00000532285 RTN1Q16799 776 aa26.53■■□□□ 1.84
CAPN1-222ENST00000532285 Q6ZUG5 572 aa26.53■■□□□ 1.84
CAPN1-222ENST00000532285 CCDC82Q8N4S0 544 aa26.53■■□□□ 1.84
CAPN1-222ENST00000532285 TOX2Q96NM4 488 aa26.53■■□□□ 1.84
CAPN1-222ENST00000532285 PDCD2LQ9BRP1 358 aa26.53■■□□□ 1.84
CAPN1-222ENST00000532285 MYH7BA7E2Y1 1941 aa26.53■■□□□ 1.84
CAPN1-222ENST00000532285 TRIOBPQ9H2D6 2365 aa26.53■■□□□ 1.84
CAPN1-222ENST00000532285 A0A0U1RQG5 324 aaPredicted RBP26.52■■□□□ 1.84
CAPN1-222ENST00000532285 A0A1W2PPC1 479 aa26.52■■□□□ 1.84
CAPN1-222ENST00000532285 RPS6KB1P23443 525 aa26.52■■□□□ 1.84
CAPN1-222ENST00000532285 MROH7Q68CQ1 1323 aa26.52■■□□□ 1.84
CAPN1-222ENST00000532285 SEPT14Q6ZU15 432 aa26.52■■□□□ 1.84
CAPN1-222ENST00000532285 ANKRD33Q7Z3H0 272 aa26.52■■□□□ 1.84
CAPN1-222ENST00000532285 FCHSD1Q86WN1 690 aa26.52■■□□□ 1.84
CAPN1-222ENST00000532285 FBXL16Q8N461 479 aa26.52■■□□□ 1.84
CAPN1-222ENST00000532285 OR6J1Q8NGC5 347 aa26.52■■□□□ 1.84
CAPN1-222ENST00000532285 DCDC2CA8MYV0 355 aa26.51■■□□□ 1.83
CAPN1-222ENST00000532285 PQBP1O60828 265 aaKnown RBP26.51■■□□□ 1.83
CAPN1-222ENST00000532285 CASTP20810 708 aaKnown RBP26.51■■□□□ 1.83
CAPN1-222ENST00000532285 CPT1AP50416 773 aa26.51■■□□□ 1.83
CAPN1-222ENST00000532285 CCDC62Q6P9F0 684 aa26.51■■□□□ 1.83
CAPN1-222ENST00000532285 CXCL17Q6UXB2 119 aa26.51■■□□□ 1.83
CAPN1-222ENST00000532285 LBHD1Q9BQE6 289 aaPredicted RBP26.51■■□□□ 1.83
CAPN1-222ENST00000532285 PRDM5Q9NQX1 630 aaPredicted RBP26.51■■□□□ 1.83
CAPN1-222ENST00000532285 PDLIM7Q9NR12 457 aa26.51■■□□□ 1.83
CAPN1-222ENST00000532285 GOLGA8AA7E2F4 631 aa26.5■■□□□ 1.83
CAPN1-222ENST00000532285 GOLGA8BA8MQT2 603 aa26.5■■□□□ 1.83
CAPN1-222ENST00000532285 ARVCFO00192 962 aa26.5■■□□□ 1.83
CAPN1-222ENST00000532285 CLTBP09497 229 aa26.5■■□□□ 1.83
CAPN1-222ENST00000532285 CDK7P50613 346 aa26.5■■□□□ 1.83
CAPN1-222ENST00000532285 PGM5Q15124 567 aa26.5■■□□□ 1.83
CAPN1-222ENST00000532285 BRDTQ58F21 947 aaPredicted RBP26.5■■□□□ 1.83
CAPN1-222ENST00000532285 VSIG10LQ86VR7 867 aa26.5■■□□□ 1.83
CAPN1-222ENST00000532285 CUL5Q93034 780 aa26.5■■□□□ 1.83
CAPN1-222ENST00000532285 NAP1L2Q9ULW6 460 aaPredicted RBP26.5■■□□□ 1.83
CAPN1-222ENST00000532285 ARIH2O95376 493 aa26.49■■□□□ 1.83
CAPN1-222ENST00000532285 MYCLP12524 364 aaPredicted RBP26.49■■□□□ 1.83
CAPN1-222ENST00000532285 MDM2Q00987 491 aaPredicted RBP26.49■■□□□ 1.83
CAPN1-222ENST00000532285 APOBRQ0VD83 1088 aa26.49■■□□□ 1.83
CAPN1-222ENST00000532285 COPS5Q92905 334 aa26.49■■□□□ 1.83
CAPN1-222ENST00000532285 BRF1Q92994 677 aa26.49■■□□□ 1.83
CAPN1-222ENST00000532285 SEZ6LQ9BYH1 1024 aa26.49■■□□□ 1.83
CAPN1-222ENST00000532285 AGXT2Q9BYV1 514 aa26.49■■□□□ 1.83
CAPN1-222ENST00000532285 POLR3EQ9NVU0 708 aa26.49■■□□□ 1.83
CAPN1-222ENST00000532285 CNTNAP5Q8WYK1 1306 aa26.48■■□□□ 1.83
CAPN1-222ENST00000532285 hCG_1642624A0A1W2PR95 340 aa26.48■■□□□ 1.83
CAPN1-222ENST00000532285 PIK3CDO00329 1044 aa26.48■■□□□ 1.83
CAPN1-222ENST00000532285 CCND2P30279 289 aa26.48■■□□□ 1.83
CAPN1-222ENST00000532285 LY6KQ17RY6 165 aa26.48■■□□□ 1.83
CAPN1-222ENST00000532285 SMARCC2Q8TAQ2 1214 aa26.48■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms