RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 MRPL11Q9Y3B7 192 aaKnown RBP19.63■□□□□ 0.73
CPSF1-207ENST00000531727 A6NJR5 290 aa19.62■□□□□ 0.73
CPSF1-207ENST00000531727 KPNA6O60684 536 aa19.62■□□□□ 0.73
CPSF1-207ENST00000531727 TXNP10599 105 aaKnown RBP19.62■□□□□ 0.73
CPSF1-207ENST00000531727 CHMLP26374 656 aa19.62■□□□□ 0.73
CPSF1-207ENST00000531727 CCL23P55773 120 aa19.62■□□□□ 0.73
CPSF1-207ENST00000531727 STAG2Q8N3U4 1231 aa19.62■□□□□ 0.73
CPSF1-207ENST00000531727 NSUN6Q8TEA1 469 aaKnown RBP19.62■□□□□ 0.73
CPSF1-207ENST00000531727 HERVK_113Q902F9 699 aa19.62■□□□□ 0.73
CPSF1-207ENST00000531727 COPS5Q92905 334 aa19.62■□□□□ 0.73
CPSF1-207ENST00000531727 TAAR1Q96RJ0 339 aa19.62■□□□□ 0.73
CPSF1-207ENST00000531727 WNT8AQ9H1J5 351 aa19.62■□□□□ 0.73
CPSF1-207ENST00000531727 COL20A1Q9P218 1284 aa19.62■□□□□ 0.73
CPSF1-207ENST00000531727 EYSQ5T1H1 3165 aa19.62■□□□□ 0.73
CPSF1-207ENST00000531727 UNC80Q8N2C7 3258 aa19.61■□□□□ 0.73
CPSF1-207ENST00000531727 SCN10AQ9Y5Y9 1956 aa19.61■□□□□ 0.73
CPSF1-207ENST00000531727 KIAA1217Q5T5P2 1943 aa19.61■□□□□ 0.73
CPSF1-207ENST00000531727 ARIH2O95376 493 aa19.61■□□□□ 0.73
CPSF1-207ENST00000531727 SUPT20HL2P0C7V6 817 aa19.61■□□□□ 0.73
CPSF1-207ENST00000531727 PTH1RQ03431 593 aa19.61■□□□□ 0.73
CPSF1-207ENST00000531727 TRDNQ13061 729 aa19.61■□□□□ 0.73
CPSF1-207ENST00000531727 CCDC62Q6P9F0 684 aa19.61■□□□□ 0.73
CPSF1-207ENST00000531727 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.61■□□□□ 0.73
CPSF1-207ENST00000531727 MAFAQ8NHW3 353 aaPredicted RBP19.61■□□□□ 0.73
CPSF1-207ENST00000531727 TIFAQ96CG3 184 aa19.61■□□□□ 0.73
CPSF1-207ENST00000531727 IWS1Q96ST2 819 aa19.61■□□□□ 0.73
CPSF1-207ENST00000531727 MTIF3Q9H2K0 278 aaKnown RBP19.61■□□□□ 0.73
CPSF1-207ENST00000531727 TRMT13Q9NUP7 481 aaKnown RBP19.61■□□□□ 0.73
CPSF1-207ENST00000531727 U3KPZ7 1027 aaPredicted RBP19.61■□□□□ 0.73
CPSF1-207ENST00000531727 CDH23Q9H251 3354 aa19.6■□□□□ 0.73
CPSF1-207ENST00000531727 GRXCR1A8MXD5 290 aa19.6■□□□□ 0.73
CPSF1-207ENST00000531727 KLRF2D3W0D1 207 aa19.6■□□□□ 0.73
CPSF1-207ENST00000531727 FGBP02675 491 aa19.6■□□□□ 0.73
CPSF1-207ENST00000531727 CYP21A2P08686 494 aa19.6■□□□□ 0.73
CPSF1-207ENST00000531727 FOSL2P15408 326 aa19.6■□□□□ 0.73
CPSF1-207ENST00000531727 MTMR8Q96EF0 704 aa19.6■□□□□ 0.73
CPSF1-207ENST00000531727 RMDN3Q96TC7 470 aa19.6■□□□□ 0.73
CPSF1-207ENST00000531727 AMNQ9BXJ7 453 aa19.6■□□□□ 0.73
CPSF1-207ENST00000531727 PBX4Q9BYU1 374 aa19.6■□□□□ 0.73
CPSF1-207ENST00000531727 MAD2L2Q9UI95 211 aa19.6■□□□□ 0.73
CPSF1-207ENST00000531727 A0A0C4DFX4 3053 aa19.59■□□□□ 0.73
CPSF1-207ENST00000531727 PALM3A6NDB9 673 aaPredicted RBP19.59■□□□□ 0.73
CPSF1-207ENST00000531727 PBX2P40425 430 aa19.59■□□□□ 0.73
CPSF1-207ENST00000531727 IRX6P78412 446 aaPredicted RBP19.59■□□□□ 0.73
CPSF1-207ENST00000531727 GRIN2CQ14957 1233 aa19.59■□□□□ 0.73
CPSF1-207ENST00000531727 STXBP2Q15833 593 aa19.59■□□□□ 0.73
CPSF1-207ENST00000531727 NBPF20Q3BBV1 942 aa19.59■□□□□ 0.73
CPSF1-207ENST00000531727 NFRKBQ6P4R8 1299 aa19.59■□□□□ 0.73
CPSF1-207ENST00000531727 RPUSD2Q8IZ73 545 aaKnown RBP19.59■□□□□ 0.73
CPSF1-207ENST00000531727 ZNF576Q9H609 170 aa19.59■□□□□ 0.73
CPSF1-207ENST00000531727 CXXC1Q9P0U4 656 aaPredicted RBP19.59■□□□□ 0.73
CPSF1-207ENST00000531727 OPLAHO14841 1288 aa19.58■□□□□ 0.72
CPSF1-207ENST00000531727 CYP2C9P11712 490 aa19.58■□□□□ 0.72
CPSF1-207ENST00000531727 GHRHRQ02643 423 aa19.58■□□□□ 0.72
CPSF1-207ENST00000531727 FAM47CQ5HY64 1035 aa19.58■□□□□ 0.72
CPSF1-207ENST00000531727 ARHGEF16Q5VV41 709 aa19.58■□□□□ 0.72
CPSF1-207ENST00000531727 SEPT14Q6ZU15 432 aa19.58■□□□□ 0.72
CPSF1-207ENST00000531727 OTOP2Q7RTS6 562 aa19.58■□□□□ 0.72
CPSF1-207ENST00000531727 SCLYQ96I15 445 aa19.58■□□□□ 0.72
CPSF1-207ENST00000531727 GBF1Q92538 1859 aa19.57■□□□□ 0.72
CPSF1-207ENST00000531727 IFIT3O14879 490 aaKnown RBP19.57■□□□□ 0.72
CPSF1-207ENST00000531727 ZBTB5O15062 677 aa19.57■□□□□ 0.72
CPSF1-207ENST00000531727 SGSM2O43147 1006 aa19.57■□□□□ 0.72
CPSF1-207ENST00000531727 PPP1R11O60927 126 aaPredicted RBP19.57■□□□□ 0.72
CPSF1-207ENST00000531727 CFBP00751 764 aa19.57■□□□□ 0.72
CPSF1-207ENST00000531727 GH1P01241 217 aa19.57■□□□□ 0.72
CPSF1-207ENST00000531727 EIF2AK2P19525 551 aaKnown RBP19.57■□□□□ 0.72
CPSF1-207ENST00000531727 HSD17B4P51659 736 aa19.57■□□□□ 0.72
CPSF1-207ENST00000531727 PTPN11Q06124 597 aaPredicted RBP19.57■□□□□ 0.72
CPSF1-207ENST00000531727 ARHGAP1Q07960 439 aa19.57■□□□□ 0.72
CPSF1-207ENST00000531727 GRM4Q14833 912 aa19.57■□□□□ 0.72
CPSF1-207ENST00000531727 LY6KQ17RY6 165 aa19.57■□□□□ 0.72
CPSF1-207ENST00000531727 RALYLQ86SE5 291 aaKnown RBP19.57■□□□□ 0.72
CPSF1-207ENST00000531727 VWCEQ96DN2 955 aa19.57■□□□□ 0.72
CPSF1-207ENST00000531727 PXMP2Q9NR77 195 aa19.57■□□□□ 0.72
CPSF1-207ENST00000531727 ERICH2A1L162 156 aa19.56■□□□□ 0.72
CPSF1-207ENST00000531727 E7EWF7 191 aa19.56■□□□□ 0.72
CPSF1-207ENST00000531727 EIF3JO75822 258 aaKnown RBP19.56■□□□□ 0.72
CPSF1-207ENST00000531727 MMP3P08254 477 aa19.56■□□□□ 0.72
CPSF1-207ENST00000531727 RAB30Q15771 203 aa19.56■□□□□ 0.72
CPSF1-207ENST00000531727 NCOA7Q8NI08 942 aa19.56■□□□□ 0.72
CPSF1-207ENST00000531727 PPP1R13LQ8WUF5 828 aa19.56■□□□□ 0.72
CPSF1-207ENST00000531727 AFG1LQ8WV93 481 aa19.56■□□□□ 0.72
CPSF1-207ENST00000531727 MAP3K20Q9NYL2 800 aaKnown RBP19.56■□□□□ 0.72
CPSF1-207ENST00000531727 PCDHA1Q9Y5I3 950 aa19.56■□□□□ 0.72
CPSF1-207ENST00000531727 TAF6LQ9Y6J9 622 aa19.56■□□□□ 0.72
CPSF1-207ENST00000531727 TANC1Q9C0D5 1861 aa19.56■□□□□ 0.72
CPSF1-207ENST00000531727 NR3C2P08235 984 aa19.55■□□□□ 0.72
CPSF1-207ENST00000531727 PFKMP08237 780 aa19.55■□□□□ 0.72
CPSF1-207ENST00000531727 WTAPQ15007 396 aa19.55■□□□□ 0.72
CPSF1-207ENST00000531727 SLC35G1Q2M3R5 365 aa19.55■□□□□ 0.72
CPSF1-207ENST00000531727 SAMD3Q8N6K7 520 aa19.55■□□□□ 0.72
CPSF1-207ENST00000531727 RIOX1Q9H6W3 641 aa19.55■□□□□ 0.72
CPSF1-207ENST00000531727 SENP2Q9HC62 589 aa19.55■□□□□ 0.72
CPSF1-207ENST00000531727 MSRAQ9UJ68 235 aa19.55■□□□□ 0.72
CPSF1-207ENST00000531727 SCN5AQ14524 2016 aa19.54■□□□□ 0.72
CPSF1-207ENST00000531727 PITPNM1O00562 1244 aa19.54■□□□□ 0.72
CPSF1-207ENST00000531727 TRAF1Q13077 416 aa19.54■□□□□ 0.72
CPSF1-207ENST00000531727 SART3Q15020 963 aaKnown RBP19.54■□□□□ 0.72
CPSF1-207ENST00000531727 STOX1Q6ZVD7 989 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms