RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 STXBP3O00186 592 aa6.51□□□□□ -1.37
USP47-211ENST00000531513 NOBOXO60393 691 aa6.51□□□□□ -1.37
USP47-211ENST00000531513 GJA8P48165 433 aa6.51□□□□□ -1.37
USP47-211ENST00000531513 PAK2Q13177 524 aa6.51□□□□□ -1.37
USP47-211ENST00000531513 COL9A2Q14055 689 aaPredicted RBP6.51□□□□□ -1.37
USP47-211ENST00000531513 TCEAL1Q15170 157 aa6.51□□□□□ -1.37
USP47-211ENST00000531513 ZNF827Q17R98 1081 aa6.51□□□□□ -1.37
USP47-211ENST00000531513 EEF1DP3Q658K8 133 aa6.51□□□□□ -1.37
USP47-211ENST00000531513 ADCY4Q8NFM4 1077 aa6.51□□□□□ -1.37
USP47-211ENST00000531513 SMARCC2Q8TAQ2 1214 aa6.51□□□□□ -1.37
USP47-211ENST00000531513 DDX1Q92499 740 aaKnown RBP6.51□□□□□ -1.37
USP47-211ENST00000531513 NOX5Q96PH1 765 aa6.51□□□□□ -1.37
USP47-211ENST00000531513 HAUS7Q99871 368 aa6.51□□□□□ -1.37
USP47-211ENST00000531513 LTBP3Q9NS15 1303 aa6.5□□□□□ -1.37
USP47-211ENST00000531513 A0A087WZG4 1122 aa6.5□□□□□ -1.37
USP47-211ENST00000531513 AURKAO14965 403 aa6.5□□□□□ -1.37
USP47-211ENST00000531513 SOX9P48436 509 aa6.5□□□□□ -1.37
USP47-211ENST00000531513 GJA9P57773 515 aa6.5□□□□□ -1.37
USP47-211ENST00000531513 MCF2L2Q86YR7 1114 aa6.5□□□□□ -1.37
USP47-211ENST00000531513 LZTR1Q8N653 840 aa6.5□□□□□ -1.37
USP47-211ENST00000531513 RASGRP4Q8TDF6 673 aa6.5□□□□□ -1.37
USP47-211ENST00000531513 GPR20Q99678 358 aa6.5□□□□□ -1.37
USP47-211ENST00000531513 WHRNQ9P202 907 aa6.5□□□□□ -1.37
USP47-211ENST00000531513 DIS3Q9Y2L1 958 aaKnown RBP6.5□□□□□ -1.37
USP47-211ENST00000531513 TLDC2A0PJX2 215 aa6.49□□□□□ -1.37
USP47-211ENST00000531513 STK10O94804 968 aaKnown RBP6.49□□□□□ -1.37
USP47-211ENST00000531513 FGRP09769 529 aa6.49□□□□□ -1.37
USP47-211ENST00000531513 ATF4P18848 351 aaPredicted RBP6.49□□□□□ -1.37
USP47-211ENST00000531513 NCLP19338 710 aaKnown RBP6.49□□□□□ -1.37
USP47-211ENST00000531513 NETO2Q8NC67 525 aa6.49□□□□□ -1.37
USP47-211ENST00000531513 PMFBP1Q8TBY8 1022 aa6.49□□□□□ -1.37
USP47-211ENST00000531513 GINM1Q9NU53 330 aa6.49□□□□□ -1.37
USP47-211ENST00000531513 PALD1Q9ULE6 856 aa6.49□□□□□ -1.37
USP47-211ENST00000531513 MYRFQ9Y2G1 1151 aa6.49□□□□□ -1.37
USP47-211ENST00000531513 TMA7Q9Y2S6 64 aaKnown RBP6.49□□□□□ -1.37
USP47-211ENST00000531513 PPM1GO15355 546 aaPredicted RBP6.48□□□□□ -1.37
USP47-211ENST00000531513 MAGEA10P43363 369 aaPredicted RBP6.48□□□□□ -1.37
USP47-211ENST00000531513 DPY19L1Q2PZI1 675 aa6.48□□□□□ -1.37
USP47-211ENST00000531513 CCDC81Q6ZN84 652 aa6.48□□□□□ -1.37
USP47-211ENST00000531513 CPA5Q8WXQ8 436 aa6.48□□□□□ -1.37
USP47-211ENST00000531513 GPRASP2Q96D09 838 aa6.48□□□□□ -1.37
USP47-211ENST00000531513 PEX11GQ96HA9 241 aa6.48□□□□□ -1.37
USP47-211ENST00000531513 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.48□□□□□ -1.37
USP47-211ENST00000531513 MTA3Q9BTC8 594 aa6.48□□□□□ -1.37
USP47-211ENST00000531513 KLHL25Q9H0H3 589 aa6.48□□□□□ -1.37
USP47-211ENST00000531513 SPATA6Q9NWH7 488 aaPredicted RBP6.48□□□□□ -1.37
USP47-211ENST00000531513 NTMQ9P121 344 aa6.48□□□□□ -1.37
USP47-211ENST00000531513 GULP1Q9UBP9 304 aa6.48□□□□□ -1.37
USP47-211ENST00000531513 NUDT5Q9UKK9 219 aa6.48□□□□□ -1.37
USP47-211ENST00000531513 PPP1R11O60927 126 aaPredicted RBP6.47□□□□□ -1.37
USP47-211ENST00000531513 VAMP4O75379 141 aa6.47□□□□□ -1.37
USP47-211ENST00000531513 ITGB3P05106 788 aa6.47□□□□□ -1.37
USP47-211ENST00000531513 SARSP49591 514 aaKnown RBP6.47□□□□□ -1.37
USP47-211ENST00000531513 CACNB2Q08289 660 aaPredicted RBP6.47□□□□□ -1.37
USP47-211ENST00000531513 SLC9A5Q14940 896 aa6.47□□□□□ -1.37
USP47-211ENST00000531513 ZNF761Q86XN6 746 aaPredicted RBP6.47□□□□□ -1.37
USP47-211ENST00000531513 CPNE8Q86YQ8 564 aa6.47□□□□□ -1.37
USP47-211ENST00000531513 ZSWIM4Q9H7M6 989 aa6.47□□□□□ -1.37
USP47-211ENST00000531513 EFR3BQ9Y2G0 817 aa6.47□□□□□ -1.37
USP47-211ENST00000531513 BACE2Q9Y5Z0 518 aa6.47□□□□□ -1.37
USP47-211ENST00000531513 ANKRD62A6NC57 917 aa6.46□□□□□ -1.38
USP47-211ENST00000531513 GIPRP48546 466 aa6.46□□□□□ -1.38
USP47-211ENST00000531513 SEPHS1P49903 392 aa6.46□□□□□ -1.38
USP47-211ENST00000531513 ADAM17P78536 824 aa6.46□□□□□ -1.38
USP47-211ENST00000531513 SMAD4Q13485 552 aaKnown RBP6.46□□□□□ -1.38
USP47-211ENST00000531513 GNPTABQ3T906 1256 aa6.46□□□□□ -1.38
USP47-211ENST00000531513 HEATR6Q6AI08 1181 aaKnown RBP6.46□□□□□ -1.38
USP47-211ENST00000531513 WWC2Q6AWC2 1192 aa6.46□□□□□ -1.38
USP47-211ENST00000531513 ZBTB8AQ96BR9 441 aa6.46□□□□□ -1.38
USP47-211ENST00000531513 SEC16BQ96JE7 1060 aa6.46□□□□□ -1.38
USP47-211ENST00000531513 GBP3Q9H0R5 595 aa6.46□□□□□ -1.38
USP47-211ENST00000531513 OSBPL2Q9H1P3 480 aa6.46□□□□□ -1.38
USP47-211ENST00000531513 PIF1Q9H611 641 aa6.46□□□□□ -1.38
USP47-211ENST00000531513 SMPD4Q9NXE4 827 aa6.46□□□□□ -1.38
USP47-211ENST00000531513 CGGBP1Q9UFW8 167 aaPredicted RBP6.46□□□□□ -1.38
USP47-211ENST00000531513 PCDHB10Q9UN67 800 aa6.46□□□□□ -1.38
USP47-211ENST00000531513 EPHX1P07099 455 aa6.45□□□□□ -1.38
USP47-211ENST00000531513 C8BP07358 591 aa6.45□□□□□ -1.38
USP47-211ENST00000531513 DDX11Q96FC9 970 aa6.45□□□□□ -1.38
USP47-211ENST00000531513 FGD4Q96M96 766 aa6.45□□□□□ -1.38
USP47-211ENST00000531513 RBM15Q96T37 977 aaKnown RBP eCLIP6.45□□□□□ -1.38
USP47-211ENST00000531513 SIT1Q9Y3P8 196 aa6.45□□□□□ -1.38
USP47-211ENST00000531513 C2orf71A6NGG8 1288 aa6.44□□□□□ -1.38
USP47-211ENST00000531513 ZBTB7AO95365 584 aa6.44□□□□□ -1.38
USP47-211ENST00000531513 CYP2C8P10632 490 aa6.44□□□□□ -1.38
USP47-211ENST00000531513 AMPD2Q01433 879 aa6.44□□□□□ -1.38
USP47-211ENST00000531513 ZNF662Q6ZS27 426 aa6.44□□□□□ -1.38
USP47-211ENST00000531513 TTLL7Q6ZT98 887 aa6.44□□□□□ -1.38
USP47-211ENST00000531513 C19orf47Q8N9M1 422 aaKnown RBP6.44□□□□□ -1.38
USP47-211ENST00000531513 ADAMTS17Q8TE56 1095 aa6.44□□□□□ -1.38
USP47-211ENST00000531513 KRTAP3-1Q9BYR8 98 aa6.44□□□□□ -1.38
USP47-211ENST00000531513 PHAXQ9H814 394 aaKnown RBP6.44□□□□□ -1.38
USP47-211ENST00000531513 TBX22Q9Y458 520 aa6.44□□□□□ -1.38
USP47-211ENST00000531513 SLC12A7Q9Y666 1083 aa6.44□□□□□ -1.38
USP47-211ENST00000531513 NPHP3-ACAD11A0A0J9YXS1 232 aa6.43□□□□□ -1.38
USP47-211ENST00000531513 PPM1BO75688 479 aa6.43□□□□□ -1.38
USP47-211ENST00000531513 PAMP19021 973 aa6.43□□□□□ -1.38
USP47-211ENST00000531513 TNFRSF1AP19438 455 aa6.43□□□□□ -1.38
USP47-211ENST00000531513 EIF6P56537 245 aaKnown RBP6.43□□□□□ -1.38
USP47-211ENST00000531513 SLC7A5Q01650 507 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms