RNA–Protein interactions for RNA: ENST00000531474.2

NXF1-209, Transcript of nuclear RNA export factor 1, human

TSL 3

Gene NXF1, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NXF1-209	ENST00000531474	SLC39A14	Q15043	492 aa		10.78	□□□□□ -0.68
NXF1-209	ENST00000531474	ANO1	Q5XXA6	986 aa		10.78	□□□□□ -0.68
NXF1-209	ENST00000531474	WWC2	Q6AWC2	1192 aa		10.78	□□□□□ -0.68
NXF1-209	ENST00000531474	SASS6	Q6UVJ0	657 aa		10.78	□□□□□ -0.68
NXF1-209	ENST00000531474	NSMF	Q6X4W1	530 aa		10.78	□□□□□ -0.68
NXF1-209	ENST00000531474	OTOP1	Q7RTM1	612 aa		10.78	□□□□□ -0.68
NXF1-209	ENST00000531474	ANKRD35	Q8N283	1001 aa		10.78	□□□□□ -0.68
NXF1-209	ENST00000531474	SOCS4	Q8WXH5	440 aa		10.78	□□□□□ -0.68
NXF1-209	ENST00000531474	CLEC4D	Q8WXI8	215 aa		10.78	□□□□□ -0.68
NXF1-209	ENST00000531474	PGBD1	Q96JS3	809 aa		10.78	□□□□□ -0.68
NXF1-209	ENST00000531474	USP28	Q96RU2	1077 aa		10.78	□□□□□ -0.68
NXF1-209	ENST00000531474	NUDT12	Q9BQG2	462 aa		10.78	□□□□□ -0.68
NXF1-209	ENST00000531474	BRMS1	Q9HCU9	246 aa		10.78	□□□□□ -0.68
NXF1-209	ENST00000531474	DACT1	Q9NYF0	836 aa		10.78	□□□□□ -0.68
NXF1-209	ENST00000531474	CEP131	Q9UPN4	1083 aa		10.78	□□□□□ -0.68
NXF1-209	ENST00000531474	ZSWIM8	A7E2V4	1837 aa		10.78	□□□□□ -0.68
NXF1-209	ENST00000531474	STRN	O43815	780 aa		10.77	□□□□□ -0.69
NXF1-209	ENST00000531474	KIN	O60870	393 aa	Known RBP	10.77	□□□□□ -0.69
NXF1-209	ENST00000531474	BMP15	O95972	392 aa		10.77	□□□□□ -0.69
NXF1-209	ENST00000531474	GNRH1	P01148	92 aa		10.77	□□□□□ -0.69
NXF1-209	ENST00000531474	MMP1	P03956	469 aa		10.77	□□□□□ -0.69
NXF1-209	ENST00000531474	ADORA2A	P29274	412 aa		10.77	□□□□□ -0.69
NXF1-209	ENST00000531474	RGS2	P41220	211 aa		10.77	□□□□□ -0.69
NXF1-209	ENST00000531474	FLT3LG	P49771	235 aa		10.77	□□□□□ -0.69
NXF1-209	ENST00000531474	FOSB	P53539	338 aa		10.77	□□□□□ -0.69
NXF1-209	ENST00000531474	NAPA	P54920	295 aa		10.77	□□□□□ -0.69
NXF1-209	ENST00000531474	FAM160A1	Q05DH4	1040 aa		10.77	□□□□□ -0.69
NXF1-209	ENST00000531474	GRB14	Q14449	540 aa		10.77	□□□□□ -0.69
NXF1-209	ENST00000531474	PFKFB3	Q16875	520 aa	Predicted RBP	10.77	□□□□□ -0.69
NXF1-209	ENST00000531474	RILPL1	Q5EBL4	403 aa		10.77	□□□□□ -0.69
NXF1-209	ENST00000531474	MORN1	Q5T089	497 aa		10.77	□□□□□ -0.69
NXF1-209	ENST00000531474	RBM43	Q6ZSC3	357 aa	Known RBP	10.77	□□□□□ -0.69
NXF1-209	ENST00000531474	CTU1	Q7Z7A3	348 aa	Known RBP	10.77	□□□□□ -0.69
NXF1-209	ENST00000531474	DPP9	Q86TI2	863 aa		10.77	□□□□□ -0.69
NXF1-209	ENST00000531474	ABRA	Q8N0Z2	381 aa		10.77	□□□□□ -0.69
NXF1-209	ENST00000531474	A1CF	Q9NQ94	594 aa	Known RBP	10.77	□□□□□ -0.69
NXF1-209	ENST00000531474	PRDM10	Q9NQV6	1147 aa		10.77	□□□□□ -0.69
NXF1-209	ENST00000531474	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	10.77	□□□□□ -0.69
NXF1-209	ENST00000531474	SRRD	Q9UH36	339 aa		10.77	□□□□□ -0.69
NXF1-209	ENST00000531474	GABRQ	Q9UN88	632 aa		10.77	□□□□□ -0.69
NXF1-209	ENST00000531474	MORC2	Q9Y6X9	1032 aa	Predicted RBP	10.77	□□□□□ -0.69
NXF1-209	ENST00000531474	POTEB2	H3BUK9	544 aa		10.76	□□□□□ -0.69
NXF1-209	ENST00000531474	hCG_1984214	I3L0E3	225 aa		10.76	□□□□□ -0.69
NXF1-209	ENST00000531474	STXBP3	O00186	592 aa		10.76	□□□□□ -0.69
NXF1-209	ENST00000531474	PGK2	P07205	417 aa		10.76	□□□□□ -0.69
NXF1-209	ENST00000531474	LIG1	P18858	919 aa		10.76	□□□□□ -0.69
NXF1-209	ENST00000531474	CYP2B6	P20813	491 aa		10.76	□□□□□ -0.69
NXF1-209	ENST00000531474	CMA1	P23946	247 aa		10.76	□□□□□ -0.69
NXF1-209	ENST00000531474	CALML3	P27482	149 aa		10.76	□□□□□ -0.69
NXF1-209	ENST00000531474	MAP2K5	Q13163	448 aa		10.76	□□□□□ -0.69
NXF1-209	ENST00000531474	BAAT	Q14032	418 aa	Predicted RBP	10.76	□□□□□ -0.69
NXF1-209	ENST00000531474	PKN1	Q16512	942 aa		10.76	□□□□□ -0.69
NXF1-209	ENST00000531474	PPP1R18	Q6NYC8	613 aa		10.76	□□□□□ -0.69
NXF1-209	ENST00000531474	SLC30A10	Q6XR72	485 aa		10.76	□□□□□ -0.69
NXF1-209	ENST00000531474	RNF207	Q6ZRF8	634 aa		10.76	□□□□□ -0.69
NXF1-209	ENST00000531474	MCF2L2	Q86YR7	1114 aa		10.76	□□□□□ -0.69
NXF1-209	ENST00000531474	NOSTRIN	Q8IVI9	506 aa		10.76	□□□□□ -0.69
NXF1-209	ENST00000531474	ZNF713	Q8N859	430 aa	Predicted RBP	10.76	□□□□□ -0.69
NXF1-209	ENST00000531474	MRPS27	Q92552	414 aa	Known RBP	10.76	□□□□□ -0.69
NXF1-209	ENST00000531474	APBA2	Q99767	749 aa		10.76	□□□□□ -0.69
NXF1-209	ENST00000531474	FUCA2	Q9BTY2	467 aa		10.76	□□□□□ -0.69
NXF1-209	ENST00000531474	PANK2	Q9BZ23	570 aa		10.76	□□□□□ -0.69
NXF1-209	ENST00000531474	BARHL2	Q9NY43	387 aa		10.76	□□□□□ -0.69
NXF1-209	ENST00000531474	VPS54	Q9P1Q0	977 aa		10.76	□□□□□ -0.69
NXF1-209	ENST00000531474	GJD2	Q9UKL4	321 aa		10.76	□□□□□ -0.69
NXF1-209	ENST00000531474	PCDHA7	Q9UN72	937 aa		10.76	□□□□□ -0.69
NXF1-209	ENST00000531474	PFAS	O15067	1338 aa		10.76	□□□□□ -0.69
NXF1-209	ENST00000531474	GCOM1	H8Y6P7	765 aa	Predicted RBP	10.75	□□□□□ -0.69
NXF1-209	ENST00000531474	OPLAH	O14841	1288 aa		10.75	□□□□□ -0.69
NXF1-209	ENST00000531474	COBL	O75128	1261 aa		10.75	□□□□□ -0.69
NXF1-209	ENST00000531474	NR1I2	O75469	434 aa		10.75	□□□□□ -0.69
NXF1-209	ENST00000531474	CFB	P00751	764 aa		10.75	□□□□□ -0.69
NXF1-209	ENST00000531474	POLR2M	P0CAP2	368 aa		10.75	□□□□□ -0.69
NXF1-209	ENST00000531474	ADCY7	P51828	1080 aa		10.75	□□□□□ -0.69
NXF1-209	ENST00000531474	PRMT2	P55345	433 aa		10.75	□□□□□ -0.69
NXF1-209	ENST00000531474	RPS6	P62753	249 aa	Known RBP	10.75	□□□□□ -0.69
NXF1-209	ENST00000531474	CEBPZ	Q03701	1054 aa	Known RBP	10.75	□□□□□ -0.69
NXF1-209	ENST00000531474	TYW1B	Q6NUM6	668 aa		10.75	□□□□□ -0.69
NXF1-209	ENST00000531474	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	10.75	□□□□□ -0.69
NXF1-209	ENST00000531474	RAET1E	Q8TD07	263 aa		10.75	□□□□□ -0.69
NXF1-209	ENST00000531474	CCDC12	Q8WUD4	166 aa	Predicted RBP	10.75	□□□□□ -0.69
NXF1-209	ENST00000531474	TBC1D5	Q92609	795 aa		10.75	□□□□□ -0.69
NXF1-209	ENST00000531474	USP6NL	Q92738	828 aa		10.75	□□□□□ -0.69
NXF1-209	ENST00000531474	CUL5	Q93034	780 aa		10.75	□□□□□ -0.69
NXF1-209	ENST00000531474	PDLIM2	Q96JY6	352 aa		10.75	□□□□□ -0.69
NXF1-209	ENST00000531474	TIGD1	Q96MW7	591 aa		10.75	□□□□□ -0.69
NXF1-209	ENST00000531474	AIFM3	Q96NN9	605 aa		10.75	□□□□□ -0.69
NXF1-209	ENST00000531474	SH3GLB2	Q9NR46	395 aa		10.75	□□□□□ -0.69
NXF1-209	ENST00000531474	SLC5A4	Q9NY91	659 aa		10.75	□□□□□ -0.69
NXF1-209	ENST00000531474	CYP39A1	Q9NYL5	469 aa		10.75	□□□□□ -0.69
NXF1-209	ENST00000531474	SMCO2	A6NFE2	343 aa		10.74	□□□□□ -0.69
NXF1-209	ENST00000531474	CUTA	O60888	179 aa		10.74	□□□□□ -0.69
NXF1-209	ENST00000531474	HOXA13	P31271	388 aa	Predicted RBP	10.74	□□□□□ -0.69
NXF1-209	ENST00000531474	CNTN2	Q02246	1040 aa		10.74	□□□□□ -0.69
NXF1-209	ENST00000531474	ZRSR1	Q15695	479 aa	Known RBP	10.74	□□□□□ -0.69
NXF1-209	ENST00000531474	GALNT17	Q6IS24	598 aa		10.74	□□□□□ -0.69
NXF1-209	ENST00000531474	ELOA2	Q8IYF1	753 aa	Predicted RBP	10.74	□□□□□ -0.69
NXF1-209	ENST00000531474	FSIP1	Q8NA03	581 aa		10.74	□□□□□ -0.69
NXF1-209	ENST00000531474	ENGASE	Q8NFI3	743 aa		10.74	□□□□□ -0.69
NXF1-209	ENST00000531474	CCDC148	Q8NFR7	591 aa		10.74	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms