RNA–Protein interactions for RNA: ENST00000531467.5

ABCA7-214, Transcript of ATP binding cassette subfamily A member 7, human

TSL 5

Gene ABCA7, Length 569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Exosome, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA7-214	ENST00000531467	RNF146	Q9NTX7	359 aa		15.5	■□□□□ 0.07
ABCA7-214	ENST00000531467	ZSWIM5	Q9P217	1185 aa		15.5	■□□□□ 0.07
ABCA7-214	ENST00000531467	MTCH2	Q9Y6C9	303 aa		15.5	■□□□□ 0.07
ABCA7-214	ENST00000531467	GTPBP6	O43824	516 aa	Predicted RBP	15.49	■□□□□ 0.07
ABCA7-214	ENST00000531467	ICAM1	P05362	532 aa		15.49	■□□□□ 0.07
ABCA7-214	ENST00000531467	SMPD1	P17405	629 aa		15.49	■□□□□ 0.07
ABCA7-214	ENST00000531467	TTLL4	Q14679	1199 aa		15.49	■□□□□ 0.07
ABCA7-214	ENST00000531467	TMEM67	Q5HYA8	995 aa		15.49	■□□□□ 0.07
ABCA7-214	ENST00000531467	TRERF1	Q96PN7	1200 aa		15.49	■□□□□ 0.07
ABCA7-214	ENST00000531467	LRFN3	Q9BTN0	628 aa		15.49	■□□□□ 0.07
ABCA7-214	ENST00000531467	CERS4	Q9HA82	394 aa		15.49	■□□□□ 0.07
ABCA7-214	ENST00000531467	A1CF	Q9NQ94	594 aa	Known RBP	15.49	■□□□□ 0.07
ABCA7-214	ENST00000531467	PDGFC	Q9NRA1	345 aa		15.49	■□□□□ 0.07
ABCA7-214	ENST00000531467	HCN4	Q9Y3Q4	1203 aa		15.49	■□□□□ 0.07
ABCA7-214	ENST00000531467	DDX49	Q9Y6V7	483 aa	Known RBP	15.49	■□□□□ 0.07
ABCA7-214	ENST00000531467		U3KPZ7	1027 aa	Predicted RBP	15.49	■□□□□ 0.07
ABCA7-214	ENST00000531467	CA3	P07451	260 aa		15.48	■□□□□ 0.07
ABCA7-214	ENST00000531467	CYP21A2	P08686	494 aa		15.48	■□□□□ 0.07
ABCA7-214	ENST00000531467	ALAS1	P13196	640 aa		15.48	■□□□□ 0.07
ABCA7-214	ENST00000531467	POU3F3	P20264	500 aa	Predicted RBP	15.48	■□□□□ 0.07
ABCA7-214	ENST00000531467	GPATCH4	Q5T3I0	446 aa	Known RBP	15.48	■□□□□ 0.07
ABCA7-214	ENST00000531467	IQSEC1	Q6DN90	963 aa		15.48	■□□□□ 0.07
ABCA7-214	ENST00000531467	EEPD1	Q7L9B9	569 aa		15.48	■□□□□ 0.07
ABCA7-214	ENST00000531467	ENAH	Q8N8S7	591 aa	Predicted RBP	15.48	■□□□□ 0.07
ABCA7-214	ENST00000531467	PNMA1	Q8ND90	353 aa		15.48	■□□□□ 0.07
ABCA7-214	ENST00000531467	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	15.48	■□□□□ 0.07
ABCA7-214	ENST00000531467	KAT14	Q9H8E8	782 aa		15.48	■□□□□ 0.07
ABCA7-214	ENST00000531467	CCPG1	Q9ULG6	757 aa		15.48	■□□□□ 0.07
ABCA7-214	ENST00000531467	ARIH1	Q9Y4X5	557 aa	Predicted RBP	15.48	■□□□□ 0.07
ABCA7-214	ENST00000531467	TNKS	O95271	1327 aa		15.47	■□□□□ 0.07
ABCA7-214	ENST00000531467	PFKM	P08237	780 aa		15.47	■□□□□ 0.07
ABCA7-214	ENST00000531467	TMEM63B	Q5T3F8	832 aa		15.47	■□□□□ 0.07
ABCA7-214	ENST00000531467	KRT40	Q6A162	431 aa		15.47	■□□□□ 0.07
ABCA7-214	ENST00000531467	TAPT1	Q6NXT6	567 aa		15.47	■□□□□ 0.07
ABCA7-214	ENST00000531467	DEFB128	Q7Z7B8	93 aa		15.47	■□□□□ 0.07
ABCA7-214	ENST00000531467	UBAC1	Q9BSL1	405 aa		15.47	■□□□□ 0.07
ABCA7-214	ENST00000531467	COG5	Q9UP83	839 aa		15.47	■□□□□ 0.07
ABCA7-214	ENST00000531467		Q9Y3F1	56 aa		15.47	■□□□□ 0.07
ABCA7-214	ENST00000531467	TRANK1	O15050	2925 aa		15.46	■□□□□ 0.07
ABCA7-214	ENST00000531467	EPOP	A6NHQ4	379 aa		15.46	■□□□□ 0.07
ABCA7-214	ENST00000531467	TLL1	O43897	1013 aa		15.46	■□□□□ 0.07
ABCA7-214	ENST00000531467	SUPT20HL2	P0C7V6	817 aa		15.46	■□□□□ 0.07
ABCA7-214	ENST00000531467	GOLGA8H	P0CJ92	632 aa		15.46	■□□□□ 0.07
ABCA7-214	ENST00000531467	CYP2C9	P11712	490 aa		15.46	■□□□□ 0.07
ABCA7-214	ENST00000531467	TRDN	Q13061	729 aa		15.46	■□□□□ 0.07
ABCA7-214	ENST00000531467	MUM1L1	Q5H9M0	696 aa		15.46	■□□□□ 0.07
ABCA7-214	ENST00000531467	TMEM31	Q5JXX7	168 aa		15.46	■□□□□ 0.07
ABCA7-214	ENST00000531467	SKAP1	Q86WV1	359 aa		15.46	■□□□□ 0.07
ABCA7-214	ENST00000531467	FBXO16	Q8IX29	292 aa	Predicted RBP	15.46	■□□□□ 0.07
ABCA7-214	ENST00000531467	MAP4K1	Q92918	833 aa		15.46	■□□□□ 0.07
ABCA7-214	ENST00000531467	TRMT13	Q9NUP7	481 aa	Known RBP	15.46	■□□□□ 0.07
ABCA7-214	ENST00000531467	PNMA2	Q9UL42	364 aa		15.46	■□□□□ 0.07
ABCA7-214	ENST00000531467	SEC23A	Q15436	765 aa		15.45	■□□□□ 0.06
ABCA7-214	ENST00000531467	BMP2KL	Q5H9B9	411 aa		15.45	■□□□□ 0.06
ABCA7-214	ENST00000531467	KIAA1211	Q6ZU35	1233 aa		15.45	■□□□□ 0.06
ABCA7-214	ENST00000531467	CYB5R4	Q7L1T6	521 aa		15.45	■□□□□ 0.06
ABCA7-214	ENST00000531467	ARNTL2	Q8WYA1	636 aa		15.45	■□□□□ 0.06
ABCA7-214	ENST00000531467	HLA-C	Q95604	372 aa		15.45	■□□□□ 0.06
ABCA7-214	ENST00000531467	CYP39A1	Q9NYL5	469 aa		15.45	■□□□□ 0.06
ABCA7-214	ENST00000531467	WDR19	Q8NEZ3	1342 aa		15.44	■□□□□ 0.06
ABCA7-214	ENST00000531467	ACTN1	P12814	892 aa		15.44	■□□□□ 0.06
ABCA7-214	ENST00000531467	TAP1	Q03518	808 aa		15.44	■□□□□ 0.06
ABCA7-214	ENST00000531467	ASPRV1	Q53RT3	343 aa		15.44	■□□□□ 0.06
ABCA7-214	ENST00000531467	IFIT1B	Q5T764	474 aa	Known RBP	15.44	■□□□□ 0.06
ABCA7-214	ENST00000531467	NSMF	Q6X4W1	530 aa		15.44	■□□□□ 0.06
ABCA7-214	ENST00000531467	STOX1	Q6ZVD7	989 aa		15.44	■□□□□ 0.06
ABCA7-214	ENST00000531467	SLC9A7	Q96T83	725 aa		15.44	■□□□□ 0.06
ABCA7-214	ENST00000531467	UBA5	Q9GZZ9	404 aa		15.44	■□□□□ 0.06
ABCA7-214	ENST00000531467	CPVL	Q9H3G5	476 aa		15.44	■□□□□ 0.06
ABCA7-214	ENST00000531467	POLR3E	Q9NVU0	708 aa		15.44	■□□□□ 0.06
ABCA7-214	ENST00000531467	RBM8A	Q9Y5S9	174 aa	Known RBP	15.44	■□□□□ 0.06
ABCA7-214	ENST00000531467	TAF6L	Q9Y6J9	622 aa		15.44	■□□□□ 0.06
ABCA7-214	ENST00000531467	PRRC2B	Q5JSZ5	2229 aa	Known RBP	15.43	■□□□□ 0.06
ABCA7-214	ENST00000531467		E7EWF7	191 aa		15.43	■□□□□ 0.06
ABCA7-214	ENST00000531467	PARP1	P09874	1014 aa	Known RBP	15.43	■□□□□ 0.06
ABCA7-214	ENST00000531467	RALYL	Q86SE5	291 aa	Known RBP	15.43	■□□□□ 0.06
ABCA7-214	ENST00000531467	NCOA7	Q8NI08	942 aa		15.43	■□□□□ 0.06
ABCA7-214	ENST00000531467	PHOSPHO2	Q8TCD6	241 aa		15.43	■□□□□ 0.06
ABCA7-214	ENST00000531467	PURB	Q96QR8	312 aa	Known RBP	15.43	■□□□□ 0.06
ABCA7-214	ENST00000531467	ESYT1	Q9BSJ8	1104 aa		15.43	■□□□□ 0.06
ABCA7-214	ENST00000531467	LSG1	Q9H089	658 aa	Known RBP	15.43	■□□□□ 0.06
ABCA7-214	ENST00000531467	VTA1	Q9NP79	307 aa		15.43	■□□□□ 0.06
ABCA7-214	ENST00000531467	KIF28P	B7ZC32	967 aa		15.42	■□□□□ 0.06
ABCA7-214	ENST00000531467	NFIB	O00712	420 aa		15.42	■□□□□ 0.06
ABCA7-214	ENST00000531467	ARHGEF15	O94989	841 aa		15.42	■□□□□ 0.06
ABCA7-214	ENST00000531467	MYL3	P08590	195 aa		15.42	■□□□□ 0.06
ABCA7-214	ENST00000531467	PURA	Q00577	322 aa	Known RBP	15.42	■□□□□ 0.06
ABCA7-214	ENST00000531467	BAAT	Q14032	418 aa	Predicted RBP	15.42	■□□□□ 0.06
ABCA7-214	ENST00000531467	CDC37	Q16543	378 aa	Predicted RBP	15.42	■□□□□ 0.06
ABCA7-214	ENST00000531467	DUSP28	Q4G0W2	176 aa		15.42	■□□□□ 0.06
ABCA7-214	ENST00000531467	FAM47C	Q5HY64	1035 aa		15.42	■□□□□ 0.06
ABCA7-214	ENST00000531467	HERC6	Q8IVU3	1022 aa		15.42	■□□□□ 0.06
ABCA7-214	ENST00000531467	ADGRF4	Q8IZF3	695 aa		15.42	■□□□□ 0.06
ABCA7-214	ENST00000531467	CLEC4D	Q8WXI8	215 aa		15.42	■□□□□ 0.06
ABCA7-214	ENST00000531467	KHSRP	Q92945	711 aa	Known RBP eCLIP	15.42	■□□□□ 0.06
ABCA7-214	ENST00000531467	CCDC136	Q96JN2	1154 aa		15.42	■□□□□ 0.06
ABCA7-214	ENST00000531467	FTO	Q9C0B1	505 aa	Known RBP eCLIP	15.42	■□□□□ 0.06
ABCA7-214	ENST00000531467	GPHN	Q9NQX3	736 aa	Predicted RBP	15.42	■□□□□ 0.06
ABCA7-214	ENST00000531467	LRRC37A2	A6NM11	1700 aa		15.41	■□□□□ 0.06
ABCA7-214	ENST00000531467	FAM86C2P	A6NEL3	165 aa		15.41	■□□□□ 0.06

Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms