RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 EPHX1P07099 455 aa8.03□□□□□ -1.12
PTPRK-220ENST00000531466 ZNF20P17024 532 aa8.03□□□□□ -1.12
PTPRK-220ENST00000531466 PAMP19021 973 aa8.03□□□□□ -1.12
PTPRK-220ENST00000531466 AMPD2Q01433 879 aa8.03□□□□□ -1.12
PTPRK-220ENST00000531466 RGL3Q3MIN7 710 aa8.03□□□□□ -1.12
PTPRK-220ENST00000531466 TBC1D10BQ4KMP7 808 aaPredicted RBP8.03□□□□□ -1.12
PTPRK-220ENST00000531466 CPZQ66K79 652 aa8.03□□□□□ -1.12
PTPRK-220ENST00000531466 PPM1BO75688 479 aa8.02□□□□□ -1.13
PTPRK-220ENST00000531466 C7orf72A4D263 438 aa8.01□□□□□ -1.13
PTPRK-220ENST00000531466 NPHS1O60500 1241 aa8.01□□□□□ -1.13
PTPRK-220ENST00000531466 THBS2P35442 1172 aa8.01□□□□□ -1.13
PTPRK-220ENST00000531466 FANCCQ00597 558 aa8.01□□□□□ -1.13
PTPRK-220ENST00000531466 SLC7A5Q01650 507 aa8.01□□□□□ -1.13
PTPRK-220ENST00000531466 FAM26EQ8N5C1 309 aa8.01□□□□□ -1.13
PTPRK-220ENST00000531466 SAMD11Q96NU1 681 aa8.01□□□□□ -1.13
PTPRK-220ENST00000531466 CRBNQ96SW2 442 aa8.01□□□□□ -1.13
PTPRK-220ENST00000531466 C11orf84Q9BUA3 381 aaPredicted RBP8.01□□□□□ -1.13
PTPRK-220ENST00000531466 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.01□□□□□ -1.13
PTPRK-220ENST00000531466 INVSQ9Y283 1065 aa8.01□□□□□ -1.13
PTPRK-220ENST00000531466 FSHBP01225 129 aa8□□□□□ -1.13
PTPRK-220ENST00000531466 STK32CQ86UX6 486 aa8□□□□□ -1.13
PTPRK-220ENST00000531466 PHAXQ9H814 394 aaKnown RBP8□□□□□ -1.13
PTPRK-220ENST00000531466 GINM1Q9NU53 330 aa8□□□□□ -1.13
PTPRK-220ENST00000531466 SUGT1Q9Y2Z0 365 aa8□□□□□ -1.13
PTPRK-220ENST00000531466 RPL13P26373 211 aaKnown RBP7.99□□□□□ -1.13
PTPRK-220ENST00000531466 GRB10Q13322 594 aa7.99□□□□□ -1.13
PTPRK-220ENST00000531466 MBLAC2Q68D91 279 aa7.99□□□□□ -1.13
PTPRK-220ENST00000531466 ETV3LQ6ZN32 361 aa7.99□□□□□ -1.13
PTPRK-220ENST00000531466 ARHGEF39Q8N4T4 335 aa7.99□□□□□ -1.13
PTPRK-220ENST00000531466 TTC9BQ8N6N2 239 aa7.99□□□□□ -1.13
PTPRK-220ENST00000531466 SLC16A11Q8NCK7 471 aa7.99□□□□□ -1.13
PTPRK-220ENST00000531466 C1QTNF3Q9BXJ4 246 aa7.99□□□□□ -1.13
PTPRK-220ENST00000531466 BACH2Q9BYV9 841 aa7.99□□□□□ -1.13
PTPRK-220ENST00000531466 CLEC1BQ9P126 229 aa7.99□□□□□ -1.13
PTPRK-220ENST00000531466 SLC12A7Q9Y666 1083 aa7.99□□□□□ -1.13
PTPRK-220ENST00000531466 TRBV23OR9-2A0A075B6M9 112 aa7.98□□□□□ -1.13
PTPRK-220ENST00000531466 C1QTNF3-AMACRE9PGA6 284 aa7.98□□□□□ -1.13
PTPRK-220ENST00000531466 RACK1P63244 317 aaKnown RBP7.98□□□□□ -1.13
PTPRK-220ENST00000531466 KIAA2012Q0VF49 1180 aa7.98□□□□□ -1.13
PTPRK-220ENST00000531466 MCTP2Q6DN12 878 aa7.98□□□□□ -1.13
PTPRK-220ENST00000531466 CD300LDQ6UXZ3 194 aa7.98□□□□□ -1.13
PTPRK-220ENST00000531466 DCP2Q8IU60 420 aaKnown RBP7.98□□□□□ -1.13
PTPRK-220ENST00000531466 LGI4Q8N135 537 aa7.98□□□□□ -1.13
PTPRK-220ENST00000531466 CHST13Q8NET6 341 aa7.98□□□□□ -1.13
PTPRK-220ENST00000531466 PLEKHO2Q8TD55 490 aa7.98□□□□□ -1.13
PTPRK-220ENST00000531466 KLHL6Q8WZ60 621 aa7.98□□□□□ -1.13
PTPRK-220ENST00000531466 BTG4Q9NY30 223 aa7.98□□□□□ -1.13
PTPRK-220ENST00000531466 MARCH2Q9P0N8 246 aa7.98□□□□□ -1.13
PTPRK-220ENST00000531466 ZNF536O15090 1300 aa7.98□□□□□ -1.13
PTPRK-220ENST00000531466 A0A1W2PQH9 124 aa7.97□□□□□ -1.13
PTPRK-220ENST00000531466 MROH6A6NGR9 719 aa7.97□□□□□ -1.13
PTPRK-220ENST00000531466 C9orf131Q5VYM1 1079 aa7.97□□□□□ -1.13
PTPRK-220ENST00000531466 KYQ8NBH2 561 aa7.97□□□□□ -1.13
PTPRK-220ENST00000531466 DPF3Q92784 378 aa7.97□□□□□ -1.13
PTPRK-220ENST00000531466 AP5M1Q9H0R1 490 aa7.97□□□□□ -1.13
PTPRK-220ENST00000531466 SRRDQ9UH36 339 aa7.97□□□□□ -1.13
PTPRK-220ENST00000531466 ST6GALNAC2Q9UJ37 374 aa7.97□□□□□ -1.13
PTPRK-220ENST00000531466 PLS3P13797 630 aa7.96□□□□□ -1.14
PTPRK-220ENST00000531466 EIF6P56537 245 aaKnown RBP7.96□□□□□ -1.14
PTPRK-220ENST00000531466 FAM26FQ5R3K3 315 aa7.96□□□□□ -1.14
PTPRK-220ENST00000531466 BORAQ6PGQ7 559 aa7.96□□□□□ -1.14
PTPRK-220ENST00000531466 LIMS2Q7Z4I7 341 aa7.96□□□□□ -1.14
PTPRK-220ENST00000531466 FAM124AQ86V42 546 aa7.96□□□□□ -1.14
PTPRK-220ENST00000531466 RCC1LQ96I51 464 aaKnown RBP7.96□□□□□ -1.14
PTPRK-220ENST00000531466 PCDH18Q9HCL0 1135 aa7.96□□□□□ -1.14
PTPRK-220ENST00000531466 GPRC5CQ9NQ84 441 aa7.96□□□□□ -1.14
PTPRK-220ENST00000531466 DDX41Q9UJV9 622 aaKnown RBP7.96□□□□□ -1.14
PTPRK-220ENST00000531466 EFR3BQ9Y2G0 817 aa7.96□□□□□ -1.14
PTPRK-220ENST00000531466 DDX3XO00571 662 aaKnown RBP eCLIP7.95□□□□□ -1.14
PTPRK-220ENST00000531466 SGSM2O43147 1006 aa7.95□□□□□ -1.14
PTPRK-220ENST00000531466 SUV39H1O43463 412 aa7.95□□□□□ -1.14
PTPRK-220ENST00000531466 ZNF16P17020 682 aaPredicted RBP7.95□□□□□ -1.14
PTPRK-220ENST00000531466 TEX2Q8IWB9 1127 aa7.95□□□□□ -1.14
PTPRK-220ENST00000531466 TXNDC5Q8NBS9 432 aaKnown RBP7.95□□□□□ -1.14
PTPRK-220ENST00000531466 SSBP3Q9BWW4 388 aaPredicted RBP7.95□□□□□ -1.14
PTPRK-220ENST00000531466 METTL5Q9NRN9 209 aaKnown RBP7.95□□□□□ -1.14
PTPRK-220ENST00000531466 APEX2Q9UBZ4 518 aa7.95□□□□□ -1.14
PTPRK-220ENST00000531466 KCNH1O95259 989 aa7.94□□□□□ -1.14
PTPRK-220ENST00000531466 STAT5AP42229 794 aa7.94□□□□□ -1.14
PTPRK-220ENST00000531466 ITGA1P56199 1179 aa7.94□□□□□ -1.14
PTPRK-220ENST00000531466 SCRN1Q12765 414 aa7.94□□□□□ -1.14
PTPRK-220ENST00000531466 PAK2Q13177 524 aa7.94□□□□□ -1.14
PTPRK-220ENST00000531466 COL9A2Q14055 689 aaPredicted RBP7.94□□□□□ -1.14
PTPRK-220ENST00000531466 GLB1LQ6UWU2 654 aa7.94□□□□□ -1.14
PTPRK-220ENST00000531466 MIB1Q86YT6 1006 aa7.94□□□□□ -1.14
PTPRK-220ENST00000531466 TTLL6Q8N841 843 aa7.94□□□□□ -1.14
PTPRK-220ENST00000531466 C19orf47Q8N9M1 422 aaKnown RBP7.94□□□□□ -1.14
PTPRK-220ENST00000531466 DVL3Q92997 716 aaPredicted RBP7.94□□□□□ -1.14
PTPRK-220ENST00000531466 AKT3Q9Y243 479 aa7.94□□□□□ -1.14
PTPRK-220ENST00000531466 C22orf46C9J442 243 aa7.93□□□□□ -1.14
PTPRK-220ENST00000531466 THBDP07204 575 aa7.93□□□□□ -1.14
PTPRK-220ENST00000531466 GIPRP48546 466 aa7.93□□□□□ -1.14
PTPRK-220ENST00000531466 SPRED1Q7Z699 444 aa7.93□□□□□ -1.14
PTPRK-220ENST00000531466 ZC3H18Q86VM9 953 aaKnown RBP7.93□□□□□ -1.14
PTPRK-220ENST00000531466 ZNF513Q8N8E2 541 aaPredicted RBP7.93□□□□□ -1.14
PTPRK-220ENST00000531466 SCAND2PQ9GZW5 306 aaPredicted RBP7.93□□□□□ -1.14
PTPRK-220ENST00000531466 C6P13671 934 aa7.92□□□□□ -1.14
PTPRK-220ENST00000531466 PPP2R5EQ16537 467 aa7.92□□□□□ -1.14
PTPRK-220ENST00000531466 PRR31Q5SQ13 230 aa7.92□□□□□ -1.14
PTPRK-220ENST00000531466 KIAA1211LQ6NV74 962 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms