RNA–Protein interactions for RNA: ENST00000530919.5

TRIM29-216, Transcript of tripartite motif containing 29, humanhuman

TSL 3

Gene TRIM29, Length 1,227 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-216ENST00000530919 CYTH3O43739 400 aa16.23■□□□□ 0.19
TRIM29-216ENST00000530919 PPP1R11O60927 126 aaPredicted RBP16.23■□□□□ 0.19
TRIM29-216ENST00000530919 CABYRO75952 493 aa16.23■□□□□ 0.19
TRIM29-216ENST00000530919 EDNRBP24530 442 aa16.23■□□□□ 0.19
TRIM29-216ENST00000530919 LIFRP42702 1097 aa16.23■□□□□ 0.19
TRIM29-216ENST00000530919 GNAQP50148 359 aa16.23■□□□□ 0.19
TRIM29-216ENST00000530919 FAAP100Q0VG06 881 aa16.23■□□□□ 0.19
TRIM29-216ENST00000530919 COL9A3Q14050 684 aaPredicted RBP16.23■□□□□ 0.19
TRIM29-216ENST00000530919 ERICH6BQ5W0A0 696 aa16.23■□□□□ 0.19
TRIM29-216ENST00000530919 NSUN6Q8TEA1 469 aaKnown RBP16.23■□□□□ 0.19
TRIM29-216ENST00000530919 PIBF1Q8WXW3 757 aa16.23■□□□□ 0.19
TRIM29-216ENST00000530919 RNPC3Q96LT9 517 aaKnown RBP16.23■□□□□ 0.19
TRIM29-216ENST00000530919 TAAR1Q96RJ0 339 aa16.23■□□□□ 0.19
TRIM29-216ENST00000530919 WDR11Q9BZH6 1224 aa16.23■□□□□ 0.19
TRIM29-216ENST00000530919 Q9Y3F1 56 aa16.23■□□□□ 0.19
TRIM29-216ENST00000530919 SLC12A7Q9Y666 1083 aa16.23■□□□□ 0.19
TRIM29-216ENST00000530919 ARVCFO00192 962 aa16.22■□□□□ 0.19
TRIM29-216ENST00000530919 CTAGE5O15320 804 aa16.22■□□□□ 0.19
TRIM29-216ENST00000530919 CALM1P0DP23 149 aa16.22■□□□□ 0.19
TRIM29-216ENST00000530919 CALM2P0DP24 149 aa16.22■□□□□ 0.19
TRIM29-216ENST00000530919 CALM3P0DP25 149 aa16.22■□□□□ 0.19
TRIM29-216ENST00000530919 PTGS1P23219 599 aa16.22■□□□□ 0.19
TRIM29-216ENST00000530919 NKX3-2P78367 333 aa16.22■□□□□ 0.19
TRIM29-216ENST00000530919 KRT32Q14532 448 aa16.22■□□□□ 0.19
TRIM29-216ENST00000530919 TSGA10IPQ3SY00 556 aa16.22■□□□□ 0.19
TRIM29-216ENST00000530919 DUSP28Q4G0W2 176 aa16.22■□□□□ 0.19
TRIM29-216ENST00000530919 C9orf50Q5SZB4 431 aa16.22■□□□□ 0.19
TRIM29-216ENST00000530919 TMEM63BQ5T3F8 832 aa16.22■□□□□ 0.19
TRIM29-216ENST00000530919 ZNF697Q5TEC3 545 aa16.22■□□□□ 0.19
TRIM29-216ENST00000530919 ARHGEF16Q5VV41 709 aa16.22■□□□□ 0.19
TRIM29-216ENST00000530919 CXCL17Q6UXB2 119 aa16.22■□□□□ 0.19
TRIM29-216ENST00000530919 RASEFQ8IZ41 740 aa16.22■□□□□ 0.19
TRIM29-216ENST00000530919 RMDN3Q96TC7 470 aa16.22■□□□□ 0.19
TRIM29-216ENST00000530919 LZTS2Q9BRK4 669 aa16.22■□□□□ 0.19
TRIM29-216ENST00000530919 COL20A1Q9P218 1284 aa16.22■□□□□ 0.19
TRIM29-216ENST00000530919 RBM47A0AV96 593 aaKnown RBP16.21■□□□□ 0.19
TRIM29-216ENST00000530919 RXRAP19793 462 aa16.21■□□□□ 0.19
TRIM29-216ENST00000530919 PPP2R5BQ15173 497 aa16.21■□□□□ 0.19
TRIM29-216ENST00000530919 BRDTQ58F21 947 aaPredicted RBP16.21■□□□□ 0.19
TRIM29-216ENST00000530919 SYNE3Q6ZMZ3 975 aa16.21■□□□□ 0.19
TRIM29-216ENST00000530919 DHX32Q7L7V1 743 aaKnown RBP16.21■□□□□ 0.19
TRIM29-216ENST00000530919 SCFD2Q8WU76 684 aa16.21■□□□□ 0.19
TRIM29-216ENST00000530919 RRP36Q96EU6 259 aaKnown RBP16.21■□□□□ 0.19
TRIM29-216ENST00000530919 FAM161BQ96MY7 647 aa16.21■□□□□ 0.19
TRIM29-216ENST00000530919 IWS1Q96ST2 819 aa16.21■□□□□ 0.19
TRIM29-216ENST00000530919 SPZ1Q9BXG8 430 aa16.21■□□□□ 0.19
TRIM29-216ENST00000530919 MAP3K20Q9NYL2 800 aaKnown RBP16.21■□□□□ 0.19
TRIM29-216ENST00000530919 LAMA2P24043 3122 aaKnown RBP16.21■□□□□ 0.18
TRIM29-216ENST00000530919 OPLAHO14841 1288 aa16.2■□□□□ 0.18
TRIM29-216ENST00000530919 REC8O95072 547 aa16.2■□□□□ 0.18
TRIM29-216ENST00000530919 TIMP1P01033 207 aa16.2■□□□□ 0.18
TRIM29-216ENST00000530919 EIF2AK2P19525 551 aaKnown RBP16.2■□□□□ 0.18
TRIM29-216ENST00000530919 ITGB8P26012 769 aa16.2■□□□□ 0.18
TRIM29-216ENST00000530919 SMARCA1P28370 1054 aa16.2■□□□□ 0.18
TRIM29-216ENST00000530919 CPT1AP50416 773 aa16.2■□□□□ 0.18
TRIM29-216ENST00000530919 HSD17B4P51659 736 aa16.2■□□□□ 0.18
TRIM29-216ENST00000530919 STXBP2Q15833 593 aa16.2■□□□□ 0.18
TRIM29-216ENST00000530919 ADCK5Q3MIX3 580 aa16.2■□□□□ 0.18
TRIM29-216ENST00000530919 RAB11FIP4Q86YS3 637 aa16.2■□□□□ 0.18
TRIM29-216ENST00000530919 SAMD3Q8N6K7 520 aa16.2■□□□□ 0.18
TRIM29-216ENST00000530919 SLC17A8Q8NDX2 589 aa16.2■□□□□ 0.18
TRIM29-216ENST00000530919 TCEANC2Q96MN5 208 aa16.2■□□□□ 0.18
TRIM29-216ENST00000530919 PPP1R12CQ9BZL4 782 aa16.2■□□□□ 0.18
TRIM29-216ENST00000530919 MTMR10Q9NXD2 777 aa16.2■□□□□ 0.18
TRIM29-216ENST00000530919 SEC63Q9UGP8 760 aaKnown RBP16.2■□□□□ 0.18
TRIM29-216ENST00000530919 GCOM1H8Y6P7 765 aaPredicted RBP16.19■□□□□ 0.18
TRIM29-216ENST00000530919 NKRFO15226 690 aaKnown RBP eCLIP16.19■□□□□ 0.18
TRIM29-216ENST00000530919 PLEKHA8P1O95397 391 aa16.19■□□□□ 0.18
TRIM29-216ENST00000530919 HMGB1P09429 215 aaKnown RBP16.19■□□□□ 0.18
TRIM29-216ENST00000530919 POLR2MP0CAP2 368 aa16.19■□□□□ 0.18
TRIM29-216ENST00000530919 TXNP10599 105 aaKnown RBP16.19■□□□□ 0.18
TRIM29-216ENST00000530919 HOXA13P31271 388 aaPredicted RBP16.19■□□□□ 0.18
TRIM29-216ENST00000530919 EXOSC10Q01780 885 aaKnown RBP16.19■□□□□ 0.18
TRIM29-216ENST00000530919 GHRHRQ02643 423 aa16.19■□□□□ 0.18
TRIM29-216ENST00000530919 PPIGQ13427 754 aaKnown RBP eCLIP16.19■□□□□ 0.18
TRIM29-216ENST00000530919 ITGA7Q13683 1181 aa16.19■□□□□ 0.18
TRIM29-216ENST00000530919 TTLL4Q14679 1199 aa16.19■□□□□ 0.18
TRIM29-216ENST00000530919 SEPT14Q6ZU15 432 aa16.19■□□□□ 0.18
TRIM29-216ENST00000530919 SGMS1Q86VZ5 419 aa16.19■□□□□ 0.18
TRIM29-216ENST00000530919 MICU3Q86XE3 530 aa16.19■□□□□ 0.18
TRIM29-216ENST00000530919 TMEM199Q8N511 208 aa16.19■□□□□ 0.18
TRIM29-216ENST00000530919 FANCBQ8NB91 859 aa16.19■□□□□ 0.18
TRIM29-216ENST00000530919 OR6J1Q8NGC5 347 aa16.19■□□□□ 0.18
TRIM29-216ENST00000530919 PXMP2Q9NR77 195 aa16.19■□□□□ 0.18
TRIM29-216ENST00000530919 TBX21Q9UL17 535 aa16.19■□□□□ 0.18
TRIM29-216ENST00000530919 NR3C2P08235 984 aa16.18■□□□□ 0.18
TRIM29-216ENST00000530919 MYL3P08590 195 aa16.18■□□□□ 0.18
TRIM29-216ENST00000530919 HSPA4P34932 840 aa16.18■□□□□ 0.18
TRIM29-216ENST00000530919 CDK7P50613 346 aa16.18■□□□□ 0.18
TRIM29-216ENST00000530919 SMAD3P84022 425 aaKnown RBP16.18■□□□□ 0.18
TRIM29-216ENST00000530919 FGD1P98174 961 aa16.18■□□□□ 0.18
TRIM29-216ENST00000530919 FAM109BQ6ICB4 259 aaPredicted RBP16.18■□□□□ 0.18
TRIM29-216ENST00000530919 FCHSD1Q86WN1 690 aa16.18■□□□□ 0.18
TRIM29-216ENST00000530919 FAM126BQ8IXS8 530 aa16.18■□□□□ 0.18
TRIM29-216ENST00000530919 CMTR1Q8N1G2 835 aaKnown RBP16.18■□□□□ 0.18
TRIM29-216ENST00000530919 SRBD1Q8N5C6 995 aaKnown RBP16.18■□□□□ 0.18
TRIM29-216ENST00000530919 SEZ6LQ9BYH1 1024 aa16.18■□□□□ 0.18
TRIM29-216ENST00000530919 POLR3EQ9NVU0 708 aa16.18■□□□□ 0.18
TRIM29-216ENST00000530919 STXBP5LQ9Y2K9 1186 aa16.18■□□□□ 0.18
TRIM29-216ENST00000530919 EIF3JO75822 258 aaKnown RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms