RNA–Protein interactions for RNA: ENST00000530887.5

PSMC3-208, Transcript of proteasome 26S subunit, ATPase 3, humanhuman

TSL 2

Gene PSMC3, Length 891 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3-208ENST00000530887 TRAF1Q13077 416 aa21.31■■□□□ 1
PSMC3-208ENST00000530887 PPP2R2DQ66LE6 453 aa21.31■■□□□ 1
PSMC3-208ENST00000530887 RASGRP2Q7LDG7 609 aa21.31■■□□□ 1
PSMC3-208ENST00000530887 ZNF589Q86UQ0 364 aaPredicted RBP21.31■■□□□ 1
PSMC3-208ENST00000530887 SMC5Q8IY18 1101 aa21.31■■□□□ 1
PSMC3-208ENST00000530887 NSUN6Q8TEA1 469 aaKnown RBP21.31■■□□□ 1
PSMC3-208ENST00000530887 ANKS1AQ92625 1134 aa21.31■■□□□ 1
PSMC3-208ENST00000530887 PRDM6Q9NQX0 595 aa21.31■■□□□ 1
PSMC3-208ENST00000530887 NOD1Q9Y239 953 aa21.31■■□□□ 1
PSMC3-208ENST00000530887 UMODL1Q5DID0 1318 aa21.3■■□□□ 1
PSMC3-208ENST00000530887 VCANP13611 3396 aa21.3■■□□□ 1
PSMC3-208ENST00000530887 KIF28PB7ZC32 967 aa21.3■■□□□ 1
PSMC3-208ENST00000530887 MRPS5P82675 430 aaKnown RBP21.3■■□□□ 1
PSMC3-208ENST00000530887 FAM47CQ5HY64 1035 aa21.3■■□□□ 1
PSMC3-208ENST00000530887 SAMD3Q8N6K7 520 aa21.3■■□□□ 1
PSMC3-208ENST00000530887 PNMA1Q8ND90 353 aa21.3■■□□□ 1
PSMC3-208ENST00000530887 CAGE1Q8TC20 777 aa21.3■■□□□ 1
PSMC3-208ENST00000530887 NKX2-4Q9H2Z4 354 aa21.3■■□□□ 1
PSMC3-208ENST00000530887 CNNM2Q9H8M5 875 aa21.3■■□□□ 1
PSMC3-208ENST00000530887 DIAPH3Q9NSV4 1193 aa21.3■■□□□ 1
PSMC3-208ENST00000530887 MAP3K20Q9NYL2 800 aaKnown RBP21.3■■□□□ 1
PSMC3-208ENST00000530887 MRPL11Q9Y3B7 192 aaKnown RBP21.3■■□□□ 1
PSMC3-208ENST00000530887 EYSQ5T1H1 3165 aa21.3■■□□□ 1
PSMC3-208ENST00000530887 BAIAP3O94812 1187 aa21.29■■□□□ 1
PSMC3-208ENST00000530887 IMMTQ16891 758 aaKnown RBP21.29■■□□□ 1
PSMC3-208ENST00000530887 AAK1Q2M2I8 961 aa21.29■■□□□ 1
PSMC3-208ENST00000530887 NBPF20Q3BBV1 942 aa21.29■■□□□ 1
PSMC3-208ENST00000530887 TMEM67Q5HYA8 995 aa21.29■■□□□ 1
PSMC3-208ENST00000530887 PURBQ96QR8 312 aaKnown RBP21.29■■□□□ 1
PSMC3-208ENST00000530887 DSCC1Q9BVC3 393 aa21.29■■□□□ 1
PSMC3-208ENST00000530887 KRT23Q9C075 422 aa21.29■■□□□ 1
PSMC3-208ENST00000530887 LNPKQ9C0E8 428 aa21.29■■□□□ 1
PSMC3-208ENST00000530887 TRMT13Q9NUP7 481 aaKnown RBP21.29■■□□□ 1
PSMC3-208ENST00000530887 NCOR1O75376 2440 aa21.29■■□□□ 1
PSMC3-208ENST00000530887 TNFRSF10AO00220 468 aa21.28■■□□□ 1
PSMC3-208ENST00000530887 GH1P01241 217 aa21.28■■□□□ 1
PSMC3-208ENST00000530887 IGFBP4P22692 258 aa21.28■■□□□ 1
PSMC3-208ENST00000530887 STXBP2Q15833 593 aa21.28■■□□□ 1
PSMC3-208ENST00000530887 CDC37Q16543 378 aaPredicted RBP21.28■■□□□ 1
PSMC3-208ENST00000530887 SESTD1Q86VW0 696 aa21.28■■□□□ 1
PSMC3-208ENST00000530887 TBC1D10CQ8IV04 446 aa21.28■■□□□ 1
PSMC3-208ENST00000530887 USP38Q8NB14 1042 aa21.28■■□□□ 1
PSMC3-208ENST00000530887 KATNAL1Q9BW62 490 aa21.28■■□□□ 1
PSMC3-208ENST00000530887 GTPBP6O43824 516 aaPredicted RBP21.27■■□□□ 1
PSMC3-208ENST00000530887 CASTP20810 708 aaKnown RBP21.27■■□□□ 1
PSMC3-208ENST00000530887 CHD1LQ86WJ1 897 aa21.27■■□□□ 1
PSMC3-208ENST00000530887 AFAP1L1Q8TED9 768 aa21.27■■□□□ 1
PSMC3-208ENST00000530887 SCLYQ96I15 445 aa21.27■■□□□ 1
PSMC3-208ENST00000530887 ASB2Q96Q27 587 aa21.27■■□□□ 1
PSMC3-208ENST00000530887 PARP1P09874 1014 aaKnown RBP21.26■□□□□ 0.99
PSMC3-208ENST00000530887 IQCF3P0C7M6 154 aa21.26■□□□□ 0.99
PSMC3-208ENST00000530887 CYP2C9P11712 490 aa21.26■□□□□ 0.99
PSMC3-208ENST00000530887 POU3F3P20264 500 aaPredicted RBP21.26■□□□□ 0.99
PSMC3-208ENST00000530887 USH1GQ495M9 461 aa21.26■□□□□ 0.99
PSMC3-208ENST00000530887 KCNV1Q6PIU1 500 aa21.26■□□□□ 0.99
PSMC3-208ENST00000530887 ZSCAN10Q96SZ4 725 aaPredicted RBP21.26■□□□□ 0.99
PSMC3-208ENST00000530887 UBAC1Q9BSL1 405 aa21.26■□□□□ 0.99
PSMC3-208ENST00000530887 YBX2Q9Y2T7 364 aaKnown RBP21.26■□□□□ 0.99
PSMC3-208ENST00000530887 DDX49Q9Y6V7 483 aaKnown RBP21.26■□□□□ 0.99
PSMC3-208ENST00000530887 LAMA4Q16363 1823 aa21.25■□□□□ 0.99
PSMC3-208ENST00000530887 EFCAB14O75071 495 aa21.25■□□□□ 0.99
PSMC3-208ENST00000530887 KDM4AO75164 1064 aa21.25■□□□□ 0.99
PSMC3-208ENST00000530887 DGKDQ16760 1214 aa21.25■□□□□ 0.99
PSMC3-208ENST00000530887 TMEM63BQ5T3F8 832 aa21.25■□□□□ 0.99
PSMC3-208ENST00000530887 CCDC62Q6P9F0 684 aa21.25■□□□□ 0.99
PSMC3-208ENST00000530887 FBXO11Q86XK2 927 aa21.25■□□□□ 0.99
PSMC3-208ENST00000530887 EMID1Q96A84 441 aaPredicted RBP21.25■□□□□ 0.99
PSMC3-208ENST00000530887 NEDD4P46934 1319 aa21.25■□□□□ 0.99
PSMC3-208ENST00000530887 EIF3JO75822 258 aaKnown RBP21.24■□□□□ 0.99
PSMC3-208ENST00000530887 ADGRE1Q14246 886 aa21.24■□□□□ 0.99
PSMC3-208ENST00000530887 DEFB128Q7Z7B8 93 aa21.24■□□□□ 0.99
PSMC3-208ENST00000530887 ADGRF4Q8IZF3 695 aa21.24■□□□□ 0.99
PSMC3-208ENST00000530887 SYTL5Q8TDW5 730 aaPredicted RBP21.24■□□□□ 0.99
PSMC3-208ENST00000530887 PPM1EQ8WY54 764 aa21.24■□□□□ 0.99
PSMC3-208ENST00000530887 RMDN3Q96TC7 470 aa21.24■□□□□ 0.99
PSMC3-208ENST00000530887 FTOQ9C0B1 505 aaKnown RBP eCLIP21.24■□□□□ 0.99
PSMC3-208ENST00000530887 DHX16O60231 1041 aaKnown RBP21.23■□□□□ 0.99
PSMC3-208ENST00000530887 MMP3P08254 477 aa21.23■□□□□ 0.99
PSMC3-208ENST00000530887 GOLGA8HP0CJ92 632 aa21.23■□□□□ 0.99
PSMC3-208ENST00000530887 PTGS1P23219 599 aa21.23■□□□□ 0.99
PSMC3-208ENST00000530887 KCNJ6P48051 423 aa21.23■□□□□ 0.99
PSMC3-208ENST00000530887 NUCB1Q02818 461 aa21.23■□□□□ 0.99
PSMC3-208ENST00000530887 RBL2Q08999 1139 aa21.23■□□□□ 0.99
PSMC3-208ENST00000530887 LAMC2Q13753 1193 aa21.23■□□□□ 0.99
PSMC3-208ENST00000530887 PTGISQ16647 500 aa21.23■□□□□ 0.99
PSMC3-208ENST00000530887 ARHGEF16Q5VV41 709 aa21.23■□□□□ 0.99
PSMC3-208ENST00000530887 CWC27Q6UX04 472 aaKnown RBP21.23■□□□□ 0.99
PSMC3-208ENST00000530887 PLEKHM2Q8IWE5 1019 aa21.23■□□□□ 0.99
PSMC3-208ENST00000530887 AMNQ9BXJ7 453 aa21.23■□□□□ 0.99
PSMC3-208ENST00000530887 UBA5Q9GZZ9 404 aa21.23■□□□□ 0.99
PSMC3-208ENST00000530887 GBF1Q92538 1859 aa21.23■□□□□ 0.99
PSMC3-208ENST00000530887 TANC1Q9C0D5 1861 aa21.22■□□□□ 0.99
PSMC3-208ENST00000530887 GHRHRQ02643 423 aa21.22■□□□□ 0.99
PSMC3-208ENST00000530887 ENAHQ8N8S7 591 aaPredicted RBP21.22■□□□□ 0.99
PSMC3-208ENST00000530887 ZKSCAN3Q9BRR0 538 aa21.22■□□□□ 0.99
PSMC3-208ENST00000530887 RABGGTBP53611 331 aa21.21■□□□□ 0.99
PSMC3-208ENST00000530887 TRDNQ13061 729 aa21.21■□□□□ 0.99
PSMC3-208ENST00000530887 QRICH1Q2TAL8 776 aa21.21■□□□□ 0.99
PSMC3-208ENST00000530887 IFIT1BQ5T764 474 aaKnown RBP21.21■□□□□ 0.99
PSMC3-208ENST00000530887 SEPT14Q6ZU15 432 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms