RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 CCNA1P78396 465 aa16.39■□□□□ 0.21
TTC39A-216ENST00000530004 FAM160A1Q05DH4 1040 aa16.39■□□□□ 0.21
TTC39A-216ENST00000530004 SNW1Q13573 536 aaKnown RBP16.39■□□□□ 0.21
TTC39A-216ENST00000530004 TKFCQ3LXA3 575 aa16.39■□□□□ 0.21
TTC39A-216ENST00000530004 LRSAM1Q6UWE0 723 aa16.39■□□□□ 0.21
TTC39A-216ENST00000530004 KRT25Q7Z3Z0 450 aa16.39■□□□□ 0.21
TTC39A-216ENST00000530004 CLIC6Q96NY7 704 aa16.39■□□□□ 0.21
TTC39A-216ENST00000530004 TRERF1Q96PN7 1200 aa16.39■□□□□ 0.21
TTC39A-216ENST00000530004 HOMER2Q9NSB8 354 aa16.39■□□□□ 0.21
TTC39A-216ENST00000530004 SAGE1Q9NXZ1 904 aa16.39■□□□□ 0.21
TTC39A-216ENST00000530004 FBXO2Q9UK22 296 aaPredicted RBP16.39■□□□□ 0.21
TTC39A-216ENST00000530004 ERCC3P19447 782 aa16.38■□□□□ 0.21
TTC39A-216ENST00000530004 PTPREP23469 700 aa16.38■□□□□ 0.21
TTC39A-216ENST00000530004 NDUFA8P51970 172 aa16.38■□□□□ 0.21
TTC39A-216ENST00000530004 CAMK4Q16566 473 aa16.38■□□□□ 0.21
TTC39A-216ENST00000530004 INF2Q27J81 1249 aa16.38■□□□□ 0.21
TTC39A-216ENST00000530004 JAKMIP3Q5VZ66 844 aa16.38■□□□□ 0.21
TTC39A-216ENST00000530004 SHCBP1Q8NEM2 672 aa16.38■□□□□ 0.21
TTC39A-216ENST00000530004 ENGASEQ8NFI3 743 aa16.38■□□□□ 0.21
TTC39A-216ENST00000530004 CUL5Q93034 780 aa16.38■□□□□ 0.21
TTC39A-216ENST00000530004 PORCNQ9H237 461 aa16.38■□□□□ 0.21
TTC39A-216ENST00000530004 CLSTN2Q9H4D0 955 aa16.38■□□□□ 0.21
TTC39A-216ENST00000530004 RIC8AQ9NPQ8 531 aa16.38■□□□□ 0.21
TTC39A-216ENST00000530004 RNF146Q9NTX7 359 aa16.38■□□□□ 0.21
TTC39A-216ENST00000530004 BIN2Q9UBW5 565 aaPredicted RBP16.38■□□□□ 0.21
TTC39A-216ENST00000530004 MRPL11Q9Y3B7 192 aaKnown RBP16.38■□□□□ 0.21
TTC39A-216ENST00000530004 MRVI1Q9Y6F6 885 aa16.38■□□□□ 0.21
TTC39A-216ENST00000530004 MORC2Q9Y6X9 1032 aaPredicted RBP16.38■□□□□ 0.21
TTC39A-216ENST00000530004 MCM7P33993 719 aa16.38■□□□□ 0.21
TTC39A-216ENST00000530004 COPB2P35606 906 aa16.38■□□□□ 0.21
TTC39A-216ENST00000530004 NONOQ15233 471 aaKnown RBP eCLIP16.38■□□□□ 0.21
TTC39A-216ENST00000530004 MUM1L1Q5H9M0 696 aa16.38■□□□□ 0.21
TTC39A-216ENST00000530004 SHC4Q6S5L8 630 aa16.38■□□□□ 0.21
TTC39A-216ENST00000530004 NCAPG2Q86XI2 1143 aa16.38■□□□□ 0.21
TTC39A-216ENST00000530004 CHST13Q8NET6 341 aa16.38■□□□□ 0.21
TTC39A-216ENST00000530004 CLEC4DQ8WXI8 215 aa16.38■□□□□ 0.21
TTC39A-216ENST00000530004 BEGAINQ9BUH8 593 aa16.38■□□□□ 0.21
TTC39A-216ENST00000530004 TNMDQ9H2S6 317 aa16.38■□□□□ 0.21
TTC39A-216ENST00000530004 TMEM260Q9NX78 707 aa16.38■□□□□ 0.21
TTC39A-216ENST00000530004 WBP1LQ9NX94 342 aa16.38■□□□□ 0.21
TTC39A-216ENST00000530004 SRPRBQ9Y5M8 271 aaKnown RBP16.38■□□□□ 0.21
TTC39A-216ENST00000530004 COL11A1P12107 1806 aaPredicted RBP16.37■□□□□ 0.21
TTC39A-216ENST00000530004 NFIBO00712 420 aa16.37■□□□□ 0.21
TTC39A-216ENST00000530004 OPLAHO14841 1288 aa16.37■□□□□ 0.21
TTC39A-216ENST00000530004 KINO60870 393 aaKnown RBP16.37■□□□□ 0.21
TTC39A-216ENST00000530004 MRPL12P52815 198 aaKnown RBP16.37■□□□□ 0.21
TTC39A-216ENST00000530004 GRIN1Q05586 938 aa16.37■□□□□ 0.21
TTC39A-216ENST00000530004 RESP18Q5W5W9 173 aa16.37■□□□□ 0.21
TTC39A-216ENST00000530004 FMR1NBQ8N0W7 255 aaPredicted RBP16.37■□□□□ 0.21
TTC39A-216ENST00000530004 MROH8Q9H579 483 aa16.37■□□□□ 0.21
TTC39A-216ENST00000530004 ACAD9Q9H845 621 aa16.37■□□□□ 0.21
TTC39A-216ENST00000530004 PSTPIP2Q9H939 334 aa16.37■□□□□ 0.21
TTC39A-216ENST00000530004 EFCC1Q9HA90 598 aa16.37■□□□□ 0.21
TTC39A-216ENST00000530004 FBXO40Q9UH90 709 aa16.37■□□□□ 0.21
TTC39A-216ENST00000530004 PFKFB1P16118 471 aa16.36■□□□□ 0.21
TTC39A-216ENST00000530004 PTGDRQ13258 359 aa16.36■□□□□ 0.21
TTC39A-216ENST00000530004 UBE2SQ16763 222 aa16.36■□□□□ 0.21
TTC39A-216ENST00000530004 ATP2C1P98194 919 aaPredicted RBP16.36■□□□□ 0.21
TTC39A-216ENST00000530004 GLT8D2Q9H1C3 349 aa16.36■□□□□ 0.21
TTC39A-216ENST00000530004 MAPK4P31152 587 aa16.35■□□□□ 0.21
TTC39A-216ENST00000530004 CLK2P49760 499 aaKnown RBP16.35■□□□□ 0.21
TTC39A-216ENST00000530004 SPECC1Q5M775 1068 aa16.35■□□□□ 0.21
TTC39A-216ENST00000530004 WDR78Q5VTH9 848 aa16.35■□□□□ 0.21
TTC39A-216ENST00000530004 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.35■□□□□ 0.21
TTC39A-216ENST00000530004 NEK8Q86SG6 692 aa16.35■□□□□ 0.21
TTC39A-216ENST00000530004 MCF2L2Q86YR7 1114 aa16.35■□□□□ 0.21
TTC39A-216ENST00000530004 ZNF579Q8NAF0 562 aaKnown RBP16.35■□□□□ 0.21
TTC39A-216ENST00000530004 TBCKQ8TEA7 893 aa16.35■□□□□ 0.21
TTC39A-216ENST00000530004 TBC1D5Q92609 795 aa16.35■□□□□ 0.21
TTC39A-216ENST00000530004 FERMT2Q96AC1 680 aa16.35■□□□□ 0.21
TTC39A-216ENST00000530004 HPSEQ9Y251 543 aa16.35■□□□□ 0.21
TTC39A-216ENST00000530004 FAM237AA0A1B0GTK4 181 aa16.34■□□□□ 0.21
TTC39A-216ENST00000530004 GPR25O00155 361 aa16.34■□□□□ 0.21
TTC39A-216ENST00000530004 SP3Q02447 781 aa16.34■□□□□ 0.21
TTC39A-216ENST00000530004 LETM2Q2VYF4 491 aa16.34■□□□□ 0.21
TTC39A-216ENST00000530004 NSMFQ6X4W1 530 aa16.34■□□□□ 0.21
TTC39A-216ENST00000530004 GPR142Q7Z601 462 aa16.34■□□□□ 0.21
TTC39A-216ENST00000530004 CSRNP2Q9H175 543 aa16.34■□□□□ 0.21
TTC39A-216ENST00000530004 TSPY26PQ9H489 355 aa16.34■□□□□ 0.21
TTC39A-216ENST00000530004 A1CFQ9NQ94 594 aaKnown RBP16.34■□□□□ 0.21
TTC39A-216ENST00000530004 SMCHD1A6NHR9 2005 aa16.34■□□□□ 0.21
TTC39A-216ENST00000530004 MEIS2O14770 477 aa16.33■□□□□ 0.21
TTC39A-216ENST00000530004 ZNF202O95125 648 aa16.33■□□□□ 0.21
TTC39A-216ENST00000530004 CFBP00751 764 aa16.33■□□□□ 0.21
TTC39A-216ENST00000530004 SYKP43405 635 aa16.33■□□□□ 0.21
TTC39A-216ENST00000530004 LACTBP83111 547 aaPredicted RBP16.33■□□□□ 0.21
TTC39A-216ENST00000530004 GHRHRQ02643 423 aa16.33■□□□□ 0.21
TTC39A-216ENST00000530004 L1TD1Q5T7N2 865 aaKnown RBP16.33■□□□□ 0.21
TTC39A-216ENST00000530004 RNF207Q6ZRF8 634 aa16.33■□□□□ 0.21
TTC39A-216ENST00000530004 RBM43Q6ZSC3 357 aaKnown RBP16.33■□□□□ 0.21
TTC39A-216ENST00000530004 CKAP2LQ8IYA6 745 aa16.33■□□□□ 0.21
TTC39A-216ENST00000530004 SAMD3Q8N6K7 520 aa16.33■□□□□ 0.21
TTC39A-216ENST00000530004 C4orf32Q8N8J7 132 aa16.33■□□□□ 0.21
TTC39A-216ENST00000530004 MAF1Q9H063 256 aa16.33■□□□□ 0.21
TTC39A-216ENST00000530004 FAM13BQ9NYF5 915 aa16.33■□□□□ 0.21
TTC39A-216ENST00000530004 GCOM1H8Y6P7 765 aaPredicted RBP16.33■□□□□ 0.2
TTC39A-216ENST00000530004 PIK3CDO00329 1044 aa16.33■□□□□ 0.2
TTC39A-216ENST00000530004 CTAGE5O15320 804 aa16.33■□□□□ 0.2
TTC39A-216ENST00000530004 CCNT1O60563 726 aaKnown RBP16.33■□□□□ 0.2
TTC39A-216ENST00000530004 POLR2MP0CAP2 368 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms