RNA–Protein interactions for RNA: ENST00000529563.5

USH1C-208, Transcript of USH1 protein network component harmonin, humanhuman

TSL 2

Gene USH1C, Length 942 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-208ENST00000529563 FTOQ9C0B1 505 aaKnown RBP eCLIP14.22□□□□□ -0.13
USH1C-208ENST00000529563 TSPYL2Q9H2G4 693 aaPredicted RBP14.22□□□□□ -0.13
USH1C-208ENST00000529563 WDR19Q8NEZ3 1342 aa14.21□□□□□ -0.13
USH1C-208ENST00000529563 PFKMP08237 780 aa14.21□□□□□ -0.13
USH1C-208ENST00000529563 ATP2A2P16615 1042 aaKnown RBP14.21□□□□□ -0.13
USH1C-208ENST00000529563 RABGGTBP53611 331 aa14.21□□□□□ -0.13
USH1C-208ENST00000529563 NBPF20Q3BBV1 942 aa14.21□□□□□ -0.13
USH1C-208ENST00000529563 CWC27Q6UX04 472 aaKnown RBP14.21□□□□□ -0.13
USH1C-208ENST00000529563 CENPQQ7L2Z9 268 aaPredicted RBP14.21□□□□□ -0.13
USH1C-208ENST00000529563 TBC1D10CQ8IV04 446 aa14.21□□□□□ -0.13
USH1C-208ENST00000529563 CLEC4DQ8WXI8 215 aa14.21□□□□□ -0.13
USH1C-208ENST00000529563 UBA5Q9GZZ9 404 aa14.21□□□□□ -0.13
USH1C-208ENST00000529563 WNT8AQ9H1J5 351 aa14.21□□□□□ -0.13
USH1C-208ENST00000529563 THEGQ9P2T0 379 aa14.21□□□□□ -0.13
USH1C-208ENST00000529563 SDSP20132 328 aa14.2□□□□□ -0.14
USH1C-208ENST00000529563 SKIV2LQ15477 1246 aaKnown RBP14.2□□□□□ -0.14
USH1C-208ENST00000529563 CDC37Q16543 378 aaPredicted RBP14.2□□□□□ -0.14
USH1C-208ENST00000529563 MCF2L2Q86YR7 1114 aa14.2□□□□□ -0.14
USH1C-208ENST00000529563 CCDC155Q8N6L0 562 aa14.2□□□□□ -0.14
USH1C-208ENST00000529563 PNMA1Q8ND90 353 aa14.2□□□□□ -0.14
USH1C-208ENST00000529563 ABCB11O95342 1321 aa14.19□□□□□ -0.14
USH1C-208ENST00000529563 NEDD4P46934 1319 aa14.19□□□□□ -0.14
USH1C-208ENST00000529563 RBM47A0AV96 593 aaKnown RBP14.19□□□□□ -0.14
USH1C-208ENST00000529563 HIP1O00291 1037 aa14.19□□□□□ -0.14
USH1C-208ENST00000529563 KDM4AO75164 1064 aa14.19□□□□□ -0.14
USH1C-208ENST00000529563 BFSP2Q13515 415 aa14.19□□□□□ -0.14
USH1C-208ENST00000529563 IMMTQ16891 758 aaKnown RBP14.19□□□□□ -0.14
USH1C-208ENST00000529563 TMEM67Q5HYA8 995 aa14.19□□□□□ -0.14
USH1C-208ENST00000529563 SEPT14Q6ZU15 432 aa14.19□□□□□ -0.14
USH1C-208ENST00000529563 CHST3Q7LGC8 479 aa14.19□□□□□ -0.14
USH1C-208ENST00000529563 DGKHQ86XP1 1220 aa14.19□□□□□ -0.14
USH1C-208ENST00000529563 PPP1R13LQ8WUF5 828 aa14.19□□□□□ -0.14
USH1C-208ENST00000529563 COPS5Q92905 334 aa14.19□□□□□ -0.14
USH1C-208ENST00000529563 UBAC1Q9BSL1 405 aa14.19□□□□□ -0.14
USH1C-208ENST00000529563 VAT1LQ9HCJ6 419 aa14.19□□□□□ -0.14
USH1C-208ENST00000529563 PRDM6Q9NQX0 595 aa14.19□□□□□ -0.14
USH1C-208ENST00000529563 PPP4R2Q9NY27 417 aa14.19□□□□□ -0.14
USH1C-208ENST00000529563 YBX2Q9Y2T7 364 aaKnown RBP14.19□□□□□ -0.14
USH1C-208ENST00000529563 PCDHA11Q9Y5I1 949 aa14.19□□□□□ -0.14
USH1C-208ENST00000529563 KIF28PB7ZC32 967 aa14.18□□□□□ -0.14
USH1C-208ENST00000529563 GTPBP6O43824 516 aaPredicted RBP14.18□□□□□ -0.14
USH1C-208ENST00000529563 PARP1P09874 1014 aaKnown RBP14.18□□□□□ -0.14
USH1C-208ENST00000529563 SNHG28P0DPA3 235 aa14.18□□□□□ -0.14
USH1C-208ENST00000529563 RFC2P35250 354 aa14.18□□□□□ -0.14
USH1C-208ENST00000529563 NT5C2P49902 561 aa14.18□□□□□ -0.14
USH1C-208ENST00000529563 ARHGEF16Q5VV41 709 aa14.18□□□□□ -0.14
USH1C-208ENST00000529563 NFRKBQ6P4R8 1299 aa14.18□□□□□ -0.14
USH1C-208ENST00000529563 NSUN6Q8TEA1 469 aaKnown RBP14.18□□□□□ -0.14
USH1C-208ENST00000529563 ATXN2LQ8WWM7 1075 aaKnown RBP14.18□□□□□ -0.14
USH1C-208ENST00000529563 ZSCAN10Q96SZ4 725 aaPredicted RBP14.18□□□□□ -0.14
USH1C-208ENST00000529563 CPVLQ9H3G5 476 aa14.18□□□□□ -0.14
USH1C-208ENST00000529563 CTNNA3Q9UI47 895 aa14.18□□□□□ -0.14
USH1C-208ENST00000529563 MRPL11Q9Y3B7 192 aaKnown RBP14.18□□□□□ -0.14
USH1C-208ENST00000529563 CDH23Q9H251 3354 aa14.18□□□□□ -0.14
USH1C-208ENST00000529563 EYSQ5T1H1 3165 aa14.18□□□□□ -0.14
USH1C-208ENST00000529563 LCTP09848 1927 aa14.17□□□□□ -0.14
USH1C-208ENST00000529563 A6NJR5 290 aa14.17□□□□□ -0.14
USH1C-208ENST00000529563 B4E1Z4 1266 aa14.17□□□□□ -0.14
USH1C-208ENST00000529563 TNFRSF10AO00220 468 aa14.17□□□□□ -0.14
USH1C-208ENST00000529563 GH1P01241 217 aa14.17□□□□□ -0.14
USH1C-208ENST00000529563 MYOGP15173 224 aa14.17□□□□□ -0.14
USH1C-208ENST00000529563 KCNJ6P48051 423 aa14.17□□□□□ -0.14
USH1C-208ENST00000529563 MRPS5P82675 430 aaKnown RBP14.17□□□□□ -0.14
USH1C-208ENST00000529563 PTPN11Q06124 597 aaPredicted RBP14.17□□□□□ -0.14
USH1C-208ENST00000529563 STXBP2Q15833 593 aa14.17□□□□□ -0.14
USH1C-208ENST00000529563 PTGISQ16647 500 aa14.17□□□□□ -0.14
USH1C-208ENST00000529563 ASPRV1Q53RT3 343 aa14.17□□□□□ -0.14
USH1C-208ENST00000529563 FBXO11Q86XK2 927 aa14.17□□□□□ -0.14
USH1C-208ENST00000529563 ADGRF4Q8IZF3 695 aa14.17□□□□□ -0.14
USH1C-208ENST00000529563 RGS22Q8NE09 1264 aa14.17□□□□□ -0.14
USH1C-208ENST00000529563 RMDN3Q96TC7 470 aa14.17□□□□□ -0.14
USH1C-208ENST00000529563 KRT23Q9C075 422 aa14.17□□□□□ -0.14
USH1C-208ENST00000529563 MYO9BQ13459 2157 aa14.16□□□□□ -0.14
USH1C-208ENST00000529563 PITPNM1O00562 1244 aa14.16□□□□□ -0.14
USH1C-208ENST00000529563 CASTP20810 708 aaKnown RBP14.16□□□□□ -0.14
USH1C-208ENST00000529563 EDNRBP24530 442 aa14.16□□□□□ -0.14
USH1C-208ENST00000529563 ADGRE1Q14246 886 aa14.16□□□□□ -0.14
USH1C-208ENST00000529563 LY6KQ17RY6 165 aa14.16□□□□□ -0.14
USH1C-208ENST00000529563 AFG1LQ8WV93 481 aa14.16□□□□□ -0.14
USH1C-208ENST00000529563 TAAR1Q96RJ0 339 aa14.16□□□□□ -0.14
USH1C-208ENST00000529563 SLC9A7Q96T83 725 aa14.16□□□□□ -0.14
USH1C-208ENST00000529563 CNNM2Q9H8M5 875 aa14.16□□□□□ -0.14
USH1C-208ENST00000529563 ARIH2O95376 493 aa14.15□□□□□ -0.14
USH1C-208ENST00000529563 CFBP00751 764 aa14.15□□□□□ -0.14
USH1C-208ENST00000529563 CA3P07451 260 aa14.15□□□□□ -0.14
USH1C-208ENST00000529563 IQCF3P0C7M6 154 aa14.15□□□□□ -0.14
USH1C-208ENST00000529563 EIF2AK2P19525 551 aaKnown RBP14.15□□□□□ -0.14
USH1C-208ENST00000529563 QRICH1Q2TAL8 776 aa14.15□□□□□ -0.14
USH1C-208ENST00000529563 IFIT1BQ5T764 474 aaKnown RBP14.15□□□□□ -0.14
USH1C-208ENST00000529563 PLEKHM2Q8IWE5 1019 aa14.15□□□□□ -0.14
USH1C-208ENST00000529563 C7orf31Q8N865 590 aa14.15□□□□□ -0.14
USH1C-208ENST00000529563 SYTL5Q8TDW5 730 aaPredicted RBP14.15□□□□□ -0.14
USH1C-208ENST00000529563 ASB2Q96Q27 587 aa14.15□□□□□ -0.14
USH1C-208ENST00000529563 IWS1Q96ST2 819 aa14.15□□□□□ -0.14
USH1C-208ENST00000529563 ZBED2Q9BTP6 218 aa14.15□□□□□ -0.14
USH1C-208ENST00000529563 CERS4Q9HA82 394 aa14.15□□□□□ -0.14
USH1C-208ENST00000529563 MRVI1Q9Y6F6 885 aa14.15□□□□□ -0.14
USH1C-208ENST00000529563 PRUNE2Q8WUY3 3088 aa14.15□□□□□ -0.14
USH1C-208ENST00000529563 MMP3P08254 477 aa14.14□□□□□ -0.15
USH1C-208ENST00000529563 TRDNQ13061 729 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms