RNA–Protein interactions for RNA: ENST00000529521.1

FDFT1-216, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 2

Gene FDFT1, Length 418 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-216ENST00000529521 HIF1AQ16665 826 aa3.17□□□□□ -1.9
FDFT1-216ENST00000529521 MSMPQ1L6U9 139 aa3.17□□□□□ -1.9
FDFT1-216ENST00000529521 SHROOM1Q2M3G4 852 aaPredicted RBP3.17□□□□□ -1.9
FDFT1-216ENST00000529521 SLC5A9Q2M3M2 681 aa3.17□□□□□ -1.9
FDFT1-216ENST00000529521 CCDC152Q4G0S7 254 aa3.17□□□□□ -1.9
FDFT1-216ENST00000529521 COX20Q5RI15 118 aa3.17□□□□□ -1.9
FDFT1-216ENST00000529521 DACT2Q5SW24 774 aa3.17□□□□□ -1.9
FDFT1-216ENST00000529521 AKNAD1Q5T1N1 836 aa3.17□□□□□ -1.9
FDFT1-216ENST00000529521 SFMBT2Q5VUG0 894 aa3.17□□□□□ -1.9
FDFT1-216ENST00000529521 ANO1Q5XXA6 986 aa3.17□□□□□ -1.9
FDFT1-216ENST00000529521 GALNT17Q6IS24 598 aa3.17□□□□□ -1.9
FDFT1-216ENST00000529521 SWSAP1Q6NVH7 229 aa3.17□□□□□ -1.9
FDFT1-216ENST00000529521 HIBCHQ6NVY1 386 aaPredicted RBP3.17□□□□□ -1.9
FDFT1-216ENST00000529521 LLGL2Q6P1M3 1020 aa3.17□□□□□ -1.9
FDFT1-216ENST00000529521 MZT2AQ6P582 158 aa3.17□□□□□ -1.9
FDFT1-216ENST00000529521 SLC4A10Q6U841 1118 aa3.17□□□□□ -1.9
FDFT1-216ENST00000529521 OLFML1Q6UWY5 402 aa3.17□□□□□ -1.9
FDFT1-216ENST00000529521 ACAD11Q709F0 780 aa3.17□□□□□ -1.9
FDFT1-216ENST00000529521 CCDC80Q76M96 950 aa3.17□□□□□ -1.9
FDFT1-216ENST00000529521 CATSPER4Q7RTX7 472 aa3.17□□□□□ -1.9
FDFT1-216ENST00000529521 PNMA8AQ86V59 439 aaPredicted RBP3.17□□□□□ -1.9
FDFT1-216ENST00000529521 SPATS2Q86XZ4 545 aaKnown RBP3.17□□□□□ -1.9
FDFT1-216ENST00000529521 ZNF354CQ86Y25 554 aa3.17□□□□□ -1.9
FDFT1-216ENST00000529521 ERC1Q8IUD2 1116 aa3.17□□□□□ -1.9
FDFT1-216ENST00000529521 CLEC10AQ8IUN9 316 aa3.17□□□□□ -1.9
FDFT1-216ENST00000529521 FAM20CQ8IXL6 584 aa3.17□□□□□ -1.9
FDFT1-216ENST00000529521 PEX5LQ8IYB4 626 aa3.17□□□□□ -1.9
FDFT1-216ENST00000529521 KRT222Q8N1A0 295 aa3.17□□□□□ -1.9
FDFT1-216ENST00000529521 KCT2Q8NC54 265 aa3.17□□□□□ -1.9
FDFT1-216ENST00000529521 OR8H1Q8NGG4 311 aa3.17□□□□□ -1.9
FDFT1-216ENST00000529521 SUN5Q8TC36 379 aa3.17□□□□□ -1.9
FDFT1-216ENST00000529521 USP33Q8TEY7 942 aa3.17□□□□□ -1.9
FDFT1-216ENST00000529521 ATXN2LQ8WWM7 1075 aaKnown RBP3.17□□□□□ -1.9
FDFT1-216ENST00000529521 RTF1Q92541 710 aaKnown RBP3.17□□□□□ -1.9
FDFT1-216ENST00000529521 RBM18Q96H35 190 aaKnown RBP3.17□□□□□ -1.9
FDFT1-216ENST00000529521 DHTKD1Q96HY7 919 aaPredicted RBP3.17□□□□□ -1.9
FDFT1-216ENST00000529521 ASB16Q96NS5 453 aa3.17□□□□□ -1.9
FDFT1-216ENST00000529521 SH3GL1Q99961 368 aa3.17□□□□□ -1.9
FDFT1-216ENST00000529521 UTP14AQ9BVJ6 771 aaKnown RBP3.17□□□□□ -1.9
FDFT1-216ENST00000529521 CAPS2Q9BXY5 557 aa3.17□□□□□ -1.9
FDFT1-216ENST00000529521 MRPL9Q9BYD2 267 aaKnown RBP3.17□□□□□ -1.9
FDFT1-216ENST00000529521 SAP130Q9H0E3 1048 aa3.17□□□□□ -1.9
FDFT1-216ENST00000529521 KANSL2Q9H9L4 492 aa3.17□□□□□ -1.9
FDFT1-216ENST00000529521 ZCCHC17Q9NP64 241 aaKnown RBP3.17□□□□□ -1.9
FDFT1-216ENST00000529521 DDX21Q9NR30 783 aaKnown RBP eCLIP3.17□□□□□ -1.9
FDFT1-216ENST00000529521 MRGBPQ9NV56 204 aa3.17□□□□□ -1.9
FDFT1-216ENST00000529521 KCNK4Q9NYG8 393 aa3.17□□□□□ -1.9
FDFT1-216ENST00000529521 SEPT10Q9P0V9 454 aa3.17□□□□□ -1.9
FDFT1-216ENST00000529521 PIM2Q9P1W9 311 aa3.17□□□□□ -1.9
FDFT1-216ENST00000529521 CPSF2Q9P2I0 782 aaKnown RBP3.17□□□□□ -1.9
FDFT1-216ENST00000529521 CCDC39Q9UFE4 941 aa3.17□□□□□ -1.9
FDFT1-216ENST00000529521 STAP2Q9UGK3 403 aa3.17□□□□□ -1.9
FDFT1-216ENST00000529521 EGFL7Q9UHF1 273 aa3.17□□□□□ -1.9
FDFT1-216ENST00000529521 FBXL5Q9UKA1 691 aa3.17□□□□□ -1.9
FDFT1-216ENST00000529521 PNMA8BQ9ULN7 279 aaPredicted RBP3.17□□□□□ -1.9
FDFT1-216ENST00000529521 SPG7Q9UQ90 795 aa3.17□□□□□ -1.9
FDFT1-216ENST00000529521 LRRFIP2Q9Y608 721 aaKnown RBP3.17□□□□□ -1.9
FDFT1-216ENST00000529521 V9GYY5 206 aaPredicted RBP3.17□□□□□ -1.9
FDFT1-216ENST00000529521 FHAD1B1AJZ9 1412 aa3.17□□□□□ -1.9
FDFT1-216ENST00000529521 NCAPD3P42695 1498 aa3.16□□□□□ -1.9
FDFT1-216ENST00000529521 KLRG2A4D1S0 409 aaPredicted RBP3.16□□□□□ -1.9
FDFT1-216ENST00000529521 FAM221BA6H8Z2 402 aa3.16□□□□□ -1.9
FDFT1-216ENST00000529521 TRIM64A6NGJ6 449 aa3.16□□□□□ -1.9
FDFT1-216ENST00000529521 TRIM64BA6NI03 449 aa3.16□□□□□ -1.9
FDFT1-216ENST00000529521 H3BRB1 525 aa3.16□□□□□ -1.9
FDFT1-216ENST00000529521 DYNC1I1O14576 645 aa3.16□□□□□ -1.9
FDFT1-216ENST00000529521 ZSCAN9O15535 394 aaPredicted RBP3.16□□□□□ -1.9
FDFT1-216ENST00000529521 RASA4O43374 803 aa3.16□□□□□ -1.9
FDFT1-216ENST00000529521 ICMTO60725 284 aa3.16□□□□□ -1.9
FDFT1-216ENST00000529521 SKAP2O75563 359 aaPredicted RBP3.16□□□□□ -1.9
FDFT1-216ENST00000529521 FAM13AO94988 1023 aa3.16□□□□□ -1.9
FDFT1-216ENST00000529521 FGFR1OPO95684 399 aaKnown RBP3.16□□□□□ -1.9
FDFT1-216ENST00000529521 SCGB1D2O95969 90 aa3.16□□□□□ -1.9
FDFT1-216ENST00000529521 PRNPP04156 253 aa3.16□□□□□ -1.9
FDFT1-216ENST00000529521 ZNF865P0CJ78 1059 aaPredicted RBP3.16□□□□□ -1.9
FDFT1-216ENST00000529521 HSPA1AP0DMV8 641 aaKnown RBP3.16□□□□□ -1.9
FDFT1-216ENST00000529521 HSPA1BP0DMV9 641 aaKnown RBP3.16□□□□□ -1.9
FDFT1-216ENST00000529521 GZMAP12544 262 aa3.16□□□□□ -1.9
FDFT1-216ENST00000529521 GRK2P25098 689 aa3.16□□□□□ -1.9
FDFT1-216ENST00000529521 MAPK1P28482 360 aa3.16□□□□□ -1.9
FDFT1-216ENST00000529521 DDIT3P35638 169 aa3.16□□□□□ -1.9
FDFT1-216ENST00000529521 MRE11P49959 708 aa3.16□□□□□ -1.9
FDFT1-216ENST00000529521 RPS6KA3P51812 740 aa3.16□□□□□ -1.9
FDFT1-216ENST00000529521 TPD52P55327 224 aaPredicted RBP3.16□□□□□ -1.9
FDFT1-216ENST00000529521 GABREP78334 506 aa3.16□□□□□ -1.9
FDFT1-216ENST00000529521 GABPB1Q06547 395 aaPredicted RBP3.16□□□□□ -1.9
FDFT1-216ENST00000529521 DGKZQ13574 1117 aa3.16□□□□□ -1.9
FDFT1-216ENST00000529521 MTMR3Q13615 1198 aa3.16□□□□□ -1.9
FDFT1-216ENST00000529521 TNIP1Q15025 636 aa3.16□□□□□ -1.9
FDFT1-216ENST00000529521 CNGA3Q16281 694 aa3.16□□□□□ -1.9
FDFT1-216ENST00000529521 RTN1Q16799 776 aa3.16□□□□□ -1.9
FDFT1-216ENST00000529521 TBC1D25Q3MII6 688 aa3.16□□□□□ -1.9
FDFT1-216ENST00000529521 GNPTABQ3T906 1256 aa3.16□□□□□ -1.9
FDFT1-216ENST00000529521 TTC31Q49AM3 519 aaPredicted RBP3.16□□□□□ -1.9
FDFT1-216ENST00000529521 RILPL1Q5EBL4 403 aa3.16□□□□□ -1.9
FDFT1-216ENST00000529521 CCDC122Q5T0U0 273 aa3.16□□□□□ -1.9
FDFT1-216ENST00000529521 HHATQ5VTY9 493 aa3.16□□□□□ -1.9
FDFT1-216ENST00000529521 MZT2BQ6NZ67 158 aa3.16□□□□□ -1.9
FDFT1-216ENST00000529521 FAM117BQ6P1L5 589 aa3.16□□□□□ -1.9
FDFT1-216ENST00000529521 KIAA1211Q6ZU35 1233 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms