RNA–Protein interactions for RNA: ENST00000529224.1

SSH3-206, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 673 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-206ENST00000529224 HOMER1Q86YM7 354 aa15.18■□□□□ 0.02
SSH3-206ENST00000529224 CTCFLQ8NI51 663 aaPredicted RBP15.18■□□□□ 0.02
SSH3-206ENST00000529224 NSUN6Q8TEA1 469 aaKnown RBP15.18■□□□□ 0.02
SSH3-206ENST00000529224 SCFD2Q8WU76 684 aa15.18■□□□□ 0.02
SSH3-206ENST00000529224 TBC1D5Q92609 795 aa15.18■□□□□ 0.02
SSH3-206ENST00000529224 TOX2Q96NM4 488 aa15.18■□□□□ 0.02
SSH3-206ENST00000529224 STXBP5LQ9Y2K9 1186 aa15.18■□□□□ 0.02
SSH3-206ENST00000529224 PCDHA1Q9Y5I3 950 aa15.18■□□□□ 0.02
SSH3-206ENST00000529224 CDH23Q9H251 3354 aa15.18■□□□□ 0.02
SSH3-206ENST00000529224 MYO9BQ13459 2157 aa15.18■□□□□ 0.02
SSH3-206ENST00000529224 PNMA6FA0A0J9YX94 578 aa15.17■□□□□ 0.02
SSH3-206ENST00000529224 CCDC69A6NI79 296 aa15.17■□□□□ 0.02
SSH3-206ENST00000529224 NKRFO15226 690 aaKnown RBP eCLIP15.17■□□□□ 0.02
SSH3-206ENST00000529224 CYTH3O43739 400 aa15.17■□□□□ 0.02
SSH3-206ENST00000529224 PPP1R11O60927 126 aaPredicted RBP15.17■□□□□ 0.02
SSH3-206ENST00000529224 CABYRO75952 493 aa15.17■□□□□ 0.02
SSH3-206ENST00000529224 CFBP00751 764 aa15.17■□□□□ 0.02
SSH3-206ENST00000529224 GNAQP50148 359 aa15.17■□□□□ 0.02
SSH3-206ENST00000529224 EPHB4P54760 987 aa15.17■□□□□ 0.02
SSH3-206ENST00000529224 PPP2R5BQ15173 497 aa15.17■□□□□ 0.02
SSH3-206ENST00000529224 SLC35G1Q2M3R5 365 aa15.17■□□□□ 0.02
SSH3-206ENST00000529224 FAM161BQ96MY7 647 aa15.17■□□□□ 0.02
SSH3-206ENST00000529224 TAAR1Q96RJ0 339 aa15.17■□□□□ 0.02
SSH3-206ENST00000529224 PIGSQ96S52 555 aa15.17■□□□□ 0.02
SSH3-206ENST00000529224 IWS1Q96ST2 819 aa15.17■□□□□ 0.02
SSH3-206ENST00000529224 RMDN3Q96TC7 470 aa15.17■□□□□ 0.02
SSH3-206ENST00000529224 LZTS2Q9BRK4 669 aa15.17■□□□□ 0.02
SSH3-206ENST00000529224 GPHNQ9NQX3 736 aaPredicted RBP15.17■□□□□ 0.02
SSH3-206ENST00000529224 MAP3K20Q9NYL2 800 aaKnown RBP15.17■□□□□ 0.02
SSH3-206ENST00000529224 COL20A1Q9P218 1284 aa15.17■□□□□ 0.02
SSH3-206ENST00000529224 TRIP12Q14669 1992 aaPredicted RBP15.16■□□□□ 0.02
SSH3-206ENST00000529224 ARVCFO00192 962 aa15.16■□□□□ 0.02
SSH3-206ENST00000529224 OPLAHO14841 1288 aa15.16■□□□□ 0.02
SSH3-206ENST00000529224 KIAA0355O15063 1070 aa15.16■□□□□ 0.02
SSH3-206ENST00000529224 CALM1P0DP23 149 aa15.16■□□□□ 0.02
SSH3-206ENST00000529224 CALM2P0DP24 149 aa15.16■□□□□ 0.02
SSH3-206ENST00000529224 CALM3P0DP25 149 aa15.16■□□□□ 0.02
SSH3-206ENST00000529224 SMARCA1P28370 1054 aa15.16■□□□□ 0.02
SSH3-206ENST00000529224 CDK7P50613 346 aa15.16■□□□□ 0.02
SSH3-206ENST00000529224 HSD17B4P51659 736 aa15.16■□□□□ 0.02
SSH3-206ENST00000529224 GHRHRQ02643 423 aa15.16■□□□□ 0.02
SSH3-206ENST00000529224 FAAP100Q0VG06 881 aa15.16■□□□□ 0.02
SSH3-206ENST00000529224 KRT32Q14532 448 aa15.16■□□□□ 0.02
SSH3-206ENST00000529224 ARHGEF16Q5VV41 709 aa15.16■□□□□ 0.02
SSH3-206ENST00000529224 CXCL17Q6UXB2 119 aa15.16■□□□□ 0.02
SSH3-206ENST00000529224 MYL10Q9BUA6 226 aa15.16■□□□□ 0.02
SSH3-206ENST00000529224 SPZ1Q9BXG8 430 aa15.16■□□□□ 0.02
SSH3-206ENST00000529224 UNC80Q8N2C7 3258 aa15.16■□□□□ 0.02
SSH3-206ENST00000529224 KAT6AQ92794 2004 aa15.16■□□□□ 0.02
SSH3-206ENST00000529224 CUL9Q8IWT3 2517 aa15.15■□□□□ 0.02
SSH3-206ENST00000529224 PTGS1P23219 599 aa15.15■□□□□ 0.02
SSH3-206ENST00000529224 CPT1AP50416 773 aa15.15■□□□□ 0.02
SSH3-206ENST00000529224 TTLL4Q14679 1199 aa15.15■□□□□ 0.02
SSH3-206ENST00000529224 STXBP2Q15833 593 aa15.15■□□□□ 0.02
SSH3-206ENST00000529224 TSGA10IPQ3SY00 556 aa15.15■□□□□ 0.02
SSH3-206ENST00000529224 BRDTQ58F21 947 aaPredicted RBP15.15■□□□□ 0.02
SSH3-206ENST00000529224 TMEM63BQ5T3F8 832 aa15.15■□□□□ 0.02
SSH3-206ENST00000529224 OR6J1Q8NGC5 347 aa15.15■□□□□ 0.02
SSH3-206ENST00000529224 GUCD1Q96NT3 240 aa15.15■□□□□ 0.02
SSH3-206ENST00000529224 NEK1Q96PY6 1258 aa15.15■□□□□ 0.02
SSH3-206ENST00000529224 SEZ6LQ9BYH1 1024 aa15.15■□□□□ 0.02
SSH3-206ENST00000529224 PXMP2Q9NR77 195 aa15.15■□□□□ 0.02
SSH3-206ENST00000529224 TMEM39AQ9NV64 488 aa15.15■□□□□ 0.02
SSH3-206ENST00000529224 SLC12A7Q9Y666 1083 aa15.15■□□□□ 0.02
SSH3-206ENST00000529224 EYSQ5T1H1 3165 aa15.14■□□□□ 0.01
SSH3-206ENST00000529224 TLR3O15455 904 aaKnown RBP15.14■□□□□ 0.01
SSH3-206ENST00000529224 TXNP10599 105 aaKnown RBP15.14■□□□□ 0.01
SSH3-206ENST00000529224 RAG1P15918 1043 aa15.14■□□□□ 0.01
SSH3-206ENST00000529224 EIF2AK2P19525 551 aaKnown RBP15.14■□□□□ 0.01
SSH3-206ENST00000529224 COL9A3Q14050 684 aaPredicted RBP15.14■□□□□ 0.01
SSH3-206ENST00000529224 FAM109BQ6ICB4 259 aaPredicted RBP15.14■□□□□ 0.01
SSH3-206ENST00000529224 SGMS1Q86VZ5 419 aa15.14■□□□□ 0.01
SSH3-206ENST00000529224 RRP36Q96EU6 259 aaKnown RBP15.14■□□□□ 0.01
SSH3-206ENST00000529224 LRRC2Q9BYS8 371 aa15.14■□□□□ 0.01
SSH3-206ENST00000529224 POLR3EQ9NVU0 708 aa15.14■□□□□ 0.01
SSH3-206ENST00000529224 SEC63Q9UGP8 760 aaKnown RBP15.14■□□□□ 0.01
SSH3-206ENST00000529224 DOCK5Q9H7D0 1870 aa15.14■□□□□ 0.01
SSH3-206ENST00000529224 GCOM1H8Y6P7 765 aaPredicted RBP15.13■□□□□ 0.01
SSH3-206ENST00000529224 EIF3JO75822 258 aaKnown RBP15.13■□□□□ 0.01
SSH3-206ENST00000529224 NR3C2P08235 984 aa15.13■□□□□ 0.01
SSH3-206ENST00000529224 POLR2MP0CAP2 368 aa15.13■□□□□ 0.01
SSH3-206ENST00000529224 ITGA7Q13683 1181 aa15.13■□□□□ 0.01
SSH3-206ENST00000529224 ERICH6BQ5W0A0 696 aa15.13■□□□□ 0.01
SSH3-206ENST00000529224 SYNE3Q6ZMZ3 975 aa15.13■□□□□ 0.01
SSH3-206ENST00000529224 SEPT14Q6ZU15 432 aa15.13■□□□□ 0.01
SSH3-206ENST00000529224 DHX32Q7L7V1 743 aaKnown RBP15.13■□□□□ 0.01
SSH3-206ENST00000529224 RASEFQ8IZ41 740 aa15.13■□□□□ 0.01
SSH3-206ENST00000529224 SLC43A3Q8NBI5 491 aa15.13■□□□□ 0.01
SSH3-206ENST00000529224 PIBF1Q8WXW3 757 aa15.13■□□□□ 0.01
SSH3-206ENST00000529224 TBX21Q9UL17 535 aa15.13■□□□□ 0.01
SSH3-206ENST00000529224 KPNA6O60684 536 aa15.12■□□□□ 0.01
SSH3-206ENST00000529224 REC8O95072 547 aa15.12■□□□□ 0.01
SSH3-206ENST00000529224 HMGB1P09429 215 aaKnown RBP15.12■□□□□ 0.01
SSH3-206ENST00000529224 HOXA13P31271 388 aaPredicted RBP15.12■□□□□ 0.01
SSH3-206ENST00000529224 EXOSC10Q01780 885 aaKnown RBP15.12■□□□□ 0.01
SSH3-206ENST00000529224 CCDC62Q6P9F0 684 aa15.12■□□□□ 0.01
SSH3-206ENST00000529224 FAM126BQ8IXS8 530 aa15.12■□□□□ 0.01
SSH3-206ENST00000529224 SRBD1Q8N5C6 995 aaKnown RBP15.12■□□□□ 0.01
SSH3-206ENST00000529224 PDCD2LQ9BRP1 358 aa15.12■□□□□ 0.01
SSH3-206ENST00000529224 PPP4R2Q9NY27 417 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms