RNA–Protein interactions for RNA: ENST00000529133.5

CAPN1-217, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-217ENST00000529133 HOXC6P09630 235 aa13.09□□□□□ -0.31
CAPN1-217ENST00000529133 PDIA4P13667 645 aaKnown RBP13.09□□□□□ -0.31
CAPN1-217ENST00000529133 CYP2B6P20813 491 aa13.09□□□□□ -0.31
CAPN1-217ENST00000529133 U2AF2P26368 475 aaKnown RBP eCLIP13.09□□□□□ -0.31
CAPN1-217ENST00000529133 RGS2P41220 211 aa13.09□□□□□ -0.31
CAPN1-217ENST00000529133 CTCFP49711 727 aaPredicted RBP13.09□□□□□ -0.31
CAPN1-217ENST00000529133 ALDH5A1P51649 535 aaPredicted RBP13.09□□□□□ -0.31
CAPN1-217ENST00000529133 MCTP1Q6DN14 999 aa13.09□□□□□ -0.31
CAPN1-217ENST00000529133 PIK3AP1Q6ZUJ8 805 aa13.09□□□□□ -0.31
CAPN1-217ENST00000529133 DPP9Q86TI2 863 aa13.09□□□□□ -0.31
CAPN1-217ENST00000529133 FERMT3Q86UX7 667 aa13.09□□□□□ -0.31
CAPN1-217ENST00000529133 DNERQ8NFT8 737 aa13.09□□□□□ -0.31
CAPN1-217ENST00000529133 IL31RAQ8NI17 732 aa13.09□□□□□ -0.31
CAPN1-217ENST00000529133 NPLOC4Q8TAT6 608 aa13.09□□□□□ -0.31
CAPN1-217ENST00000529133 RMDN3Q96TC7 470 aa13.09□□□□□ -0.31
CAPN1-217ENST00000529133 APBA2Q99767 749 aa13.09□□□□□ -0.31
CAPN1-217ENST00000529133 PXMP2Q9NR77 195 aa13.09□□□□□ -0.31
CAPN1-217ENST00000529133 ADD3Q9UEY8 706 aaKnown RBP13.09□□□□□ -0.31
CAPN1-217ENST00000529133 SRRDQ9UH36 339 aa13.09□□□□□ -0.31
CAPN1-217ENST00000529133 DIS3Q9Y2L1 958 aaKnown RBP13.09□□□□□ -0.31
CAPN1-217ENST00000529133 LCTP09848 1927 aa13.09□□□□□ -0.31
CAPN1-217ENST00000529133 ZSCAN22P10073 491 aaPredicted RBP13.08□□□□□ -0.32
CAPN1-217ENST00000529133 EIF2AK2P19525 551 aaKnown RBP13.08□□□□□ -0.32
CAPN1-217ENST00000529133 HOXD10P28358 340 aa13.08□□□□□ -0.32
CAPN1-217ENST00000529133 SREBF1P36956 1147 aa13.08□□□□□ -0.32
CAPN1-217ENST00000529133 FLT3LGP49771 235 aa13.08□□□□□ -0.32
CAPN1-217ENST00000529133 UBXN2AP68543 259 aa13.08□□□□□ -0.32
CAPN1-217ENST00000529133 RESTQ13127 1097 aa13.08□□□□□ -0.32
CAPN1-217ENST00000529133 GNL2Q13823 731 aaKnown RBP13.08□□□□□ -0.32
CAPN1-217ENST00000529133 ARHGEF6Q15052 776 aa13.08□□□□□ -0.32
CAPN1-217ENST00000529133 NONOQ15233 471 aaKnown RBP eCLIP13.08□□□□□ -0.32
CAPN1-217ENST00000529133 ARHGEF16Q5VV41 709 aa13.08□□□□□ -0.32
CAPN1-217ENST00000529133 ZNF467Q7Z7K2 595 aaPredicted RBP13.08□□□□□ -0.32
CAPN1-217ENST00000529133 NOSTRINQ8IVI9 506 aa13.08□□□□□ -0.32
CAPN1-217ENST00000529133 NSUN6Q8TEA1 469 aaKnown RBP13.08□□□□□ -0.32
CAPN1-217ENST00000529133 PDCD2LQ9BRP1 358 aa13.08□□□□□ -0.32
CAPN1-217ENST00000529133 EHMT1Q9H9B1 1298 aa13.08□□□□□ -0.32
CAPN1-217ENST00000529133 SLC5A4Q9NY91 659 aa13.08□□□□□ -0.32
CAPN1-217ENST00000529133 MGAMO43451 1857 aa13.08□□□□□ -0.32
CAPN1-217ENST00000529133 BRD1O95696 1058 aa13.07□□□□□ -0.32
CAPN1-217ENST00000529133 EDNRBP24530 442 aa13.07□□□□□ -0.32
CAPN1-217ENST00000529133 LBX1P52954 281 aa13.07□□□□□ -0.32
CAPN1-217ENST00000529133 PGM5Q15124 567 aa13.07□□□□□ -0.32
CAPN1-217ENST00000529133 INF2Q27J81 1249 aa13.07□□□□□ -0.32
CAPN1-217ENST00000529133 FOXD4L5Q5VV16 416 aaPredicted RBP13.07□□□□□ -0.32
CAPN1-217ENST00000529133 OTOP1Q7RTM1 612 aa13.07□□□□□ -0.32
CAPN1-217ENST00000529133 TBCKQ8TEA7 893 aa13.07□□□□□ -0.32
CAPN1-217ENST00000529133 CRYGNQ8WXF5 182 aa13.07□□□□□ -0.32
CAPN1-217ENST00000529133 FOXD4L4Q8WXT5 416 aaPredicted RBP13.07□□□□□ -0.32
CAPN1-217ENST00000529133 MAML3Q96JK9 1138 aa13.07□□□□□ -0.32
CAPN1-217ENST00000529133 CIZ1Q9ULV3 898 aaPredicted RBP13.07□□□□□ -0.32
CAPN1-217ENST00000529133 ZDHHC9Q9Y397 364 aa13.07□□□□□ -0.32
CAPN1-217ENST00000529133 TRIM17Q9Y577 477 aa13.07□□□□□ -0.32
CAPN1-217ENST00000529133 DDX49Q9Y6V7 483 aaKnown RBP13.07□□□□□ -0.32
CAPN1-217ENST00000529133 LOC102724159A0A0B4J2E5 919 aa13.06□□□□□ -0.32
CAPN1-217ENST00000529133 EDIL3O43854 480 aa13.06□□□□□ -0.32
CAPN1-217ENST00000529133 F13A1P00488 732 aa13.06□□□□□ -0.32
CAPN1-217ENST00000529133 NR3C2P08235 984 aa13.06□□□□□ -0.32
CAPN1-217ENST00000529133 XRCC5P13010 732 aaKnown RBP13.06□□□□□ -0.32
CAPN1-217ENST00000529133 CCND2P30279 289 aa13.06□□□□□ -0.32
CAPN1-217ENST00000529133 PRMT2P55345 433 aa13.06□□□□□ -0.32
CAPN1-217ENST00000529133 ARHGAP4P98171 946 aa13.06□□□□□ -0.32
CAPN1-217ENST00000529133 IRF5Q13568 498 aa13.06□□□□□ -0.32
CAPN1-217ENST00000529133 PWP2Q15269 919 aaKnown RBP13.06□□□□□ -0.32
CAPN1-217ENST00000529133 CCL14Q16627 93 aa13.06□□□□□ -0.32
CAPN1-217ENST00000529133 PCNX4Q63HM2 1172 aa13.06□□□□□ -0.32
CAPN1-217ENST00000529133 MAMDC4Q6UXC1 1216 aa13.06□□□□□ -0.32
CAPN1-217ENST00000529133 BRAPQ7Z569 592 aa13.06□□□□□ -0.32
CAPN1-217ENST00000529133 MORC4Q8TE76 937 aa13.06□□□□□ -0.32
CAPN1-217ENST00000529133 IWS1Q96ST2 819 aa13.06□□□□□ -0.32
CAPN1-217ENST00000529133 FLRT1Q9NZU1 646 aa13.06□□□□□ -0.32
CAPN1-217ENST00000529133 LRRC37A2A6NM11 1700 aa13.05□□□□□ -0.32
CAPN1-217ENST00000529133 ASB14A6NK59 587 aa13.05□□□□□ -0.32
CAPN1-217ENST00000529133 IGHA2P01877 340 aa13.05□□□□□ -0.32
CAPN1-217ENST00000529133 CYP3A4P08684 503 aa13.05□□□□□ -0.32
CAPN1-217ENST00000529133 MYCLP12524 364 aaPredicted RBP13.05□□□□□ -0.32
CAPN1-217ENST00000529133 NUCB2P80303 420 aa13.05□□□□□ -0.32
CAPN1-217ENST00000529133 PDE4DQ08499 809 aa13.05□□□□□ -0.32
CAPN1-217ENST00000529133 OLFML2BQ68BL8 750 aa13.05□□□□□ -0.32
CAPN1-217ENST00000529133 ARMCX2Q7L311 632 aa13.05□□□□□ -0.32
CAPN1-217ENST00000529133 NEK8Q86SG6 692 aa13.05□□□□□ -0.32
CAPN1-217ENST00000529133 VSIG10LQ86VR7 867 aa13.05□□□□□ -0.32
CAPN1-217ENST00000529133 MSL3Q8N5Y2 521 aaKnown RBP13.05□□□□□ -0.32
CAPN1-217ENST00000529133 MPHOSPH6Q99547 160 aaKnown RBP13.05□□□□□ -0.32
CAPN1-217ENST00000529133 TINF2Q9BSI4 451 aa13.05□□□□□ -0.32
CAPN1-217ENST00000529133 ZSCAN16Q9H4T2 348 aaPredicted RBP13.05□□□□□ -0.32
CAPN1-217ENST00000529133 B4DLN1 442 aa13.04□□□□□ -0.32
CAPN1-217ENST00000529133 WNT7AO00755 349 aa13.04□□□□□ -0.32
CAPN1-217ENST00000529133 SNAI1O95863 264 aaPredicted RBP13.04□□□□□ -0.32
CAPN1-217ENST00000529133 USP11P51784 963 aa13.04□□□□□ -0.32
CAPN1-217ENST00000529133 MRPS9P82933 396 aaKnown RBP13.04□□□□□ -0.32
CAPN1-217ENST00000529133 MYSM1Q5VVJ2 828 aa13.04□□□□□ -0.32
CAPN1-217ENST00000529133 XRRA1Q6P2D8 792 aa13.04□□□□□ -0.32
CAPN1-217ENST00000529133 FAM173BQ6P4H8 233 aa13.04□□□□□ -0.32
CAPN1-217ENST00000529133 RAET1EQ8TD07 263 aa13.04□□□□□ -0.32
CAPN1-217ENST00000529133 TRIB2Q92519 343 aa13.04□□□□□ -0.32
CAPN1-217ENST00000529133 ZFP91Q96JP5 570 aaPredicted RBP13.04□□□□□ -0.32
CAPN1-217ENST00000529133 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.04□□□□□ -0.32
CAPN1-217ENST00000529133 NOL7Q9UMY1 257 aaKnown RBP13.04□□□□□ -0.32
CAPN1-217ENST00000529133 PTCH2Q9Y6C5 1203 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms