RNA–Protein interactions for RNA: ENST00000528739.5

CAPN1-216, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 341 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-216ENST00000528739 PLEKHA8P1O95397 391 aa16.53■□□□□ 0.24
CAPN1-216ENST00000528739 MYL3P08590 195 aa16.53■□□□□ 0.24
CAPN1-216ENST00000528739 HMGB1P09429 215 aaKnown RBP16.53■□□□□ 0.24
CAPN1-216ENST00000528739 TXNP10599 105 aaKnown RBP16.53■□□□□ 0.24
CAPN1-216ENST00000528739 TTLL4Q14679 1199 aa16.53■□□□□ 0.24
CAPN1-216ENST00000528739 SLC35G1Q2M3R5 365 aa16.53■□□□□ 0.24
CAPN1-216ENST00000528739 SCFD2Q8WU76 684 aa16.53■□□□□ 0.24
CAPN1-216ENST00000528739 JAKMIP1Q96N16 626 aaKnown RBP16.53■□□□□ 0.24
CAPN1-216ENST00000528739 IWS1Q96ST2 819 aa16.53■□□□□ 0.24
CAPN1-216ENST00000528739 GDF15Q99988 308 aa16.53■□□□□ 0.24
CAPN1-216ENST00000528739 MAF1Q9H063 256 aa16.53■□□□□ 0.24
CAPN1-216ENST00000528739 TMEM39AQ9NV64 488 aa16.53■□□□□ 0.24
CAPN1-216ENST00000528739 COL20A1Q9P218 1284 aa16.53■□□□□ 0.24
CAPN1-216ENST00000528739 Q9Y3F1 56 aa16.53■□□□□ 0.24
CAPN1-216ENST00000528739 ELP1O95163 1332 aa16.52■□□□□ 0.24
CAPN1-216ENST00000528739 A0A0U1RQG5 324 aaPredicted RBP16.52■□□□□ 0.24
CAPN1-216ENST00000528739 CLTBP09497 229 aa16.52■□□□□ 0.24
CAPN1-216ENST00000528739 CHMP4BP1P59074 171 aa16.52■□□□□ 0.24
CAPN1-216ENST00000528739 SNX17Q15036 470 aa16.52■□□□□ 0.24
CAPN1-216ENST00000528739 CCSAPQ6IQ19 270 aaPredicted RBP16.52■□□□□ 0.24
CAPN1-216ENST00000528739 SRBD1Q8N5C6 995 aaKnown RBP16.52■□□□□ 0.24
CAPN1-216ENST00000528739 FANCBQ8NB91 859 aa16.52■□□□□ 0.24
CAPN1-216ENST00000528739 CUL5Q93034 780 aa16.52■□□□□ 0.24
CAPN1-216ENST00000528739 SPZ1Q9BXG8 430 aa16.52■□□□□ 0.24
CAPN1-216ENST00000528739 PXMP2Q9NR77 195 aa16.52■□□□□ 0.24
CAPN1-216ENST00000528739 hCG_1642624A0A1W2PR95 340 aa16.51■□□□□ 0.23
CAPN1-216ENST00000528739 NKRFO15226 690 aaKnown RBP eCLIP16.51■□□□□ 0.23
CAPN1-216ENST00000528739 TLR3O15455 904 aaKnown RBP16.51■□□□□ 0.23
CAPN1-216ENST00000528739 ZBTB43O43298 467 aa16.51■□□□□ 0.23
CAPN1-216ENST00000528739 CABYRO75952 493 aa16.51■□□□□ 0.23
CAPN1-216ENST00000528739 NR3C2P08235 984 aa16.51■□□□□ 0.23
CAPN1-216ENST00000528739 CPA1P15085 419 aa16.51■□□□□ 0.23
CAPN1-216ENST00000528739 RAG1P15918 1043 aa16.51■□□□□ 0.23
CAPN1-216ENST00000528739 EDNRBP24530 442 aa16.51■□□□□ 0.23
CAPN1-216ENST00000528739 CPT1AP50416 773 aa16.51■□□□□ 0.23
CAPN1-216ENST00000528739 HSD17B4P51659 736 aa16.51■□□□□ 0.23
CAPN1-216ENST00000528739 TSGA10IPQ3SY00 556 aa16.51■□□□□ 0.23
CAPN1-216ENST00000528739 C1orf53Q5VUE5 145 aa16.51■□□□□ 0.23
CAPN1-216ENST00000528739 BLOC1S2Q6QNY1 142 aa16.51■□□□□ 0.23
CAPN1-216ENST00000528739 SH3RF1Q7Z6J0 888 aa16.51■□□□□ 0.23
CAPN1-216ENST00000528739 SMARCC2Q8TAQ2 1214 aa16.51■□□□□ 0.23
CAPN1-216ENST00000528739 COPS5Q92905 334 aa16.51■□□□□ 0.23
CAPN1-216ENST00000528739 PDLIM7Q9NR12 457 aa16.51■□□□□ 0.23
CAPN1-216ENST00000528739 MAP3K20Q9NYL2 800 aaKnown RBP16.51■□□□□ 0.23
CAPN1-216ENST00000528739 MCM3APO60318 1980 aa16.51■□□□□ 0.23
CAPN1-216ENST00000528739 MROH7Q68CQ1 1323 aa16.5■□□□□ 0.23
CAPN1-216ENST00000528739 KLF18A0A0U1RQI7 1052 aa16.5■□□□□ 0.23
CAPN1-216ENST00000528739 RBM47A0AV96 593 aaKnown RBP16.5■□□□□ 0.23
CAPN1-216ENST00000528739 TRIM43BA6NCK2 446 aa16.5■□□□□ 0.23
CAPN1-216ENST00000528739 ARVCFO00192 962 aa16.5■□□□□ 0.23
CAPN1-216ENST00000528739 CTAGE5O15320 804 aa16.5■□□□□ 0.23
CAPN1-216ENST00000528739 PSMA5P28066 241 aa16.5■□□□□ 0.23
CAPN1-216ENST00000528739 BMP8BP34820 402 aa16.5■□□□□ 0.23
CAPN1-216ENST00000528739 HSPA4P34932 840 aa16.5■□□□□ 0.23
CAPN1-216ENST00000528739 EXOSC10Q01780 885 aaKnown RBP16.5■□□□□ 0.23
CAPN1-216ENST00000528739 RTN1Q16799 776 aa16.5■□□□□ 0.23
CAPN1-216ENST00000528739 LY6KQ17RY6 165 aa16.5■□□□□ 0.23
CAPN1-216ENST00000528739 SGMS1Q86VZ5 419 aa16.5■□□□□ 0.23
CAPN1-216ENST00000528739 SAMD3Q8N6K7 520 aa16.5■□□□□ 0.23
CAPN1-216ENST00000528739 BADQ92934 168 aa16.5■□□□□ 0.23
CAPN1-216ENST00000528739 TRIM43Q96BQ3 446 aaPredicted RBP16.5■□□□□ 0.23
CAPN1-216ENST00000528739 POLR3EQ9NVU0 708 aa16.5■□□□□ 0.23
CAPN1-216ENST00000528739 RBM28Q9NW13 759 aaKnown RBP16.5■□□□□ 0.23
CAPN1-216ENST00000528739 SNX14Q9Y5W7 946 aa16.5■□□□□ 0.23
CAPN1-216ENST00000528739 MRVI1Q9Y6F6 885 aa16.5■□□□□ 0.23
CAPN1-216ENST00000528739 ALPK3Q96L96 1907 aa16.5■□□□□ 0.23
CAPN1-216ENST00000528739 A0A1W2PPC1 479 aa16.49■□□□□ 0.23
CAPN1-216ENST00000528739 GOLGA8AA7E2F4 631 aa16.49■□□□□ 0.23
CAPN1-216ENST00000528739 GOLGA8BA8MQT2 603 aa16.49■□□□□ 0.23
CAPN1-216ENST00000528739 OPLAHO14841 1288 aa16.49■□□□□ 0.23
CAPN1-216ENST00000528739 EIF3JO75822 258 aaKnown RBP16.49■□□□□ 0.23
CAPN1-216ENST00000528739 SMARCA1P28370 1054 aa16.49■□□□□ 0.23
CAPN1-216ENST00000528739 FXR1P51114 621 aaKnown RBP eCLIP16.49■□□□□ 0.23
CAPN1-216ENST00000528739 PSMC6P62333 389 aa16.49■□□□□ 0.23
CAPN1-216ENST00000528739 ITGA7Q13683 1181 aa16.49■□□□□ 0.23
CAPN1-216ENST00000528739 APOA5Q6Q788 366 aa16.49■□□□□ 0.23
CAPN1-216ENST00000528739 Q6ZUG5 572 aa16.49■□□□□ 0.23
CAPN1-216ENST00000528739 TDHQ8IZJ6 230 aa16.49■□□□□ 0.23
CAPN1-216ENST00000528739 ZFP91Q96JP5 570 aaPredicted RBP16.49■□□□□ 0.23
CAPN1-216ENST00000528739 PRO3102Q9H379 93 aa16.49■□□□□ 0.23
CAPN1-216ENST00000528739 SORBS3O60504 671 aa16.48■□□□□ 0.23
CAPN1-216ENST00000528739 GH1P01241 217 aa16.48■□□□□ 0.23
CAPN1-216ENST00000528739 CASTP20810 708 aaKnown RBP16.48■□□□□ 0.23
CAPN1-216ENST00000528739 CCND2P30279 289 aa16.48■□□□□ 0.23
CAPN1-216ENST00000528739 NKX3-2P78367 333 aa16.48■□□□□ 0.23
CAPN1-216ENST00000528739 FAAP100Q0VG06 881 aa16.48■□□□□ 0.23
CAPN1-216ENST00000528739 FAM47CQ5HY64 1035 aa16.48■□□□□ 0.23
CAPN1-216ENST00000528739 TMTC3Q6ZXV5 915 aa16.48■□□□□ 0.23
CAPN1-216ENST00000528739 HEATR3Q7Z4Q2 680 aa16.48■□□□□ 0.23
CAPN1-216ENST00000528739 TOX2Q96NM4 488 aa16.48■□□□□ 0.23
CAPN1-216ENST00000528739 PDCD2LQ9BRP1 358 aa16.48■□□□□ 0.23
CAPN1-216ENST00000528739 BRPF3Q9ULD4 1205 aa16.48■□□□□ 0.23
CAPN1-216ENST00000528739 ARIH2O95376 493 aa16.47■□□□□ 0.23
CAPN1-216ENST00000528739 APOBRQ0VD83 1088 aa16.47■□□□□ 0.23
CAPN1-216ENST00000528739 PGM5Q15124 567 aa16.47■□□□□ 0.23
CAPN1-216ENST00000528739 USP17L6PQ6QN14 398 aa16.47■□□□□ 0.23
CAPN1-216ENST00000528739 ANKRD33Q7Z3H0 272 aa16.47■□□□□ 0.23
CAPN1-216ENST00000528739 BRF1Q92994 677 aa16.47■□□□□ 0.23
CAPN1-216ENST00000528739 MTG1Q9BT17 334 aaPredicted RBP16.47■□□□□ 0.23
CAPN1-216ENST00000528739 PSTPIP2Q9H939 334 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms