RNA–Protein interactions for RNA: ENST00000528729.1

FDFT1-213, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 3

Gene FDFT1, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-213ENST00000528729 CNTNAP3BQ96NU0 1288 aa8.34□□□□□ -1.07
FDFT1-213ENST00000528729 CDK15Q96Q40 435 aa8.34□□□□□ -1.07
FDFT1-213ENST00000528729 CNTNAP3Q9BZ76 1288 aa8.34□□□□□ -1.07
FDFT1-213ENST00000528729 XPO4Q9C0E2 1151 aaKnown RBP8.34□□□□□ -1.07
FDFT1-213ENST00000528729 LMAN2LQ9H0V9 348 aa8.34□□□□□ -1.07
FDFT1-213ENST00000528729 SMOC1Q9H4F8 434 aa8.34□□□□□ -1.07
FDFT1-213ENST00000528729 PLEKHA5Q9HAU0 1116 aa8.34□□□□□ -1.07
FDFT1-213ENST00000528729 GMIPQ9P107 970 aa8.34□□□□□ -1.07
FDFT1-213ENST00000528729 LRP2BPQ9P2M1 347 aa8.34□□□□□ -1.07
FDFT1-213ENST00000528729 HPS5Q9UPZ3 1129 aa8.34□□□□□ -1.07
FDFT1-213ENST00000528729 POGZQ7Z3K3 1410 aa8.34□□□□□ -1.07
FDFT1-213ENST00000528729 EFCAB5A4FU69 1503 aa8.34□□□□□ -1.08
FDFT1-213ENST00000528729 FANCAO15360 1455 aa8.33□□□□□ -1.08
FDFT1-213ENST00000528729 MAGI2Q86UL8 1455 aa8.33□□□□□ -1.08
FDFT1-213ENST00000528729 ABCA9Q8IUA7 1624 aa8.33□□□□□ -1.08
FDFT1-213ENST00000528729 ZNF891A8MT65 544 aaPredicted RBP8.33□□□□□ -1.08
FDFT1-213ENST00000528729 CHL1O00533 1208 aa8.33□□□□□ -1.08
FDFT1-213ENST00000528729 PCDHGA12O60330 932 aa8.33□□□□□ -1.08
FDFT1-213ENST00000528729 INMTO95050 263 aa8.33□□□□□ -1.08
FDFT1-213ENST00000528729 HTR3BO95264 441 aa8.33□□□□□ -1.08
FDFT1-213ENST00000528729 PPM1AP35813 382 aa8.33□□□□□ -1.08
FDFT1-213ENST00000528729 LSSP48449 732 aa8.33□□□□□ -1.08
FDFT1-213ENST00000528729 SNX16P57768 344 aa8.33□□□□□ -1.08
FDFT1-213ENST00000528729 DSG1Q02413 1049 aa8.33□□□□□ -1.08
FDFT1-213ENST00000528729 PPP2R3AQ06190 1150 aa8.33□□□□□ -1.08
FDFT1-213ENST00000528729 AP3B2Q13367 1082 aa8.33□□□□□ -1.08
FDFT1-213ENST00000528729 ZNF267Q14586 743 aaPredicted RBP8.33□□□□□ -1.08
FDFT1-213ENST00000528729 SLC6A19Q695T7 634 aa8.33□□□□□ -1.08
FDFT1-213ENST00000528729 OVOS1Q6IE37 1185 aa8.33□□□□□ -1.08
FDFT1-213ENST00000528729 TMEM214Q6NUQ4 689 aaKnown RBP8.33□□□□□ -1.08
FDFT1-213ENST00000528729 PDZD4Q76G19 769 aaPredicted RBP8.33□□□□□ -1.08
FDFT1-213ENST00000528729 NLRC3Q7RTR2 1065 aa8.33□□□□□ -1.08
FDFT1-213ENST00000528729 DPP9Q86TI2 863 aa8.33□□□□□ -1.08
FDFT1-213ENST00000528729 BRSK2Q8IWQ3 736 aa8.33□□□□□ -1.08
FDFT1-213ENST00000528729 ZBTB34Q8NCN2 500 aa8.33□□□□□ -1.08
FDFT1-213ENST00000528729 SLC30A5Q8TAD4 765 aa8.33□□□□□ -1.08
FDFT1-213ENST00000528729 ATG4CQ96DT6 458 aa8.33□□□□□ -1.08
FDFT1-213ENST00000528729 RMDN3Q96TC7 470 aa8.33□□□□□ -1.08
FDFT1-213ENST00000528729 TTLL2Q9BWV7 592 aa8.33□□□□□ -1.08
FDFT1-213ENST00000528729 VPS11Q9H270 941 aa8.33□□□□□ -1.08
FDFT1-213ENST00000528729 ZNF576Q9H609 170 aa8.33□□□□□ -1.08
FDFT1-213ENST00000528729 EMC7Q9NPA0 242 aa8.33□□□□□ -1.08
FDFT1-213ENST00000528729 PCDHGA9Q9Y5G4 932 aaKnown RBP8.33□□□□□ -1.08
FDFT1-213ENST00000528729 PCDHGA8Q9Y5G5 932 aa8.33□□□□□ -1.08
FDFT1-213ENST00000528729 PCDHGA7Q9Y5G6 932 aa8.33□□□□□ -1.08
FDFT1-213ENST00000528729 PCDHGA6Q9Y5G7 932 aa8.33□□□□□ -1.08
FDFT1-213ENST00000528729 PCDHGA3Q9Y5H0 932 aa8.33□□□□□ -1.08
FDFT1-213ENST00000528729 PCDHGA2Q9Y5H1 932 aa8.33□□□□□ -1.08
FDFT1-213ENST00000528729 SYNRGQ9UMZ2 1314 aa8.32□□□□□ -1.08
FDFT1-213ENST00000528729 SCAPERQ9BY12 1400 aa8.32□□□□□ -1.08
FDFT1-213ENST00000528729 ANKRD34BA5PLL1 514 aa8.32□□□□□ -1.08
FDFT1-213ENST00000528729 SYNDIG1LA6NDD5 238 aa8.32□□□□□ -1.08
FDFT1-213ENST00000528729 C19orf81C9J6K1 198 aa8.32□□□□□ -1.08
FDFT1-213ENST00000528729 TLL1O43897 1013 aa8.32□□□□□ -1.08
FDFT1-213ENST00000528729 TIPRLO75663 272 aa8.32□□□□□ -1.08
FDFT1-213ENST00000528729 POTEJP0CG39 1038 aa8.32□□□□□ -1.08
FDFT1-213ENST00000528729 IDEP14735 1019 aa8.32□□□□□ -1.08
FDFT1-213ENST00000528729 NME2P22392 152 aa8.32□□□□□ -1.08
FDFT1-213ENST00000528729 XPAP23025 273 aaPredicted RBP8.32□□□□□ -1.08
FDFT1-213ENST00000528729 SMARCA1P28370 1054 aa8.32□□□□□ -1.08
FDFT1-213ENST00000528729 GTF2E1P29083 439 aaPredicted RBP8.32□□□□□ -1.08
FDFT1-213ENST00000528729 ELF1P32519 619 aa8.32□□□□□ -1.08
FDFT1-213ENST00000528729 GRM5P41594 1212 aa8.32□□□□□ -1.08
FDFT1-213ENST00000528729 PLIN5Q00G26 463 aa8.32□□□□□ -1.08
FDFT1-213ENST00000528729 CCNG2Q16589 344 aa8.32□□□□□ -1.08
FDFT1-213ENST00000528729 SPRED3Q2MJR0 410 aa8.32□□□□□ -1.08
FDFT1-213ENST00000528729 SCARA3Q6AZY7 606 aa8.32□□□□□ -1.08
FDFT1-213ENST00000528729 LLGL2Q6P1M3 1020 aa8.32□□□□□ -1.08
FDFT1-213ENST00000528729 ZNF227Q86WZ6 799 aa8.32□□□□□ -1.08
FDFT1-213ENST00000528729 PTRH1Q86Y79 214 aaKnown RBP8.32□□□□□ -1.08
FDFT1-213ENST00000528729 GRIN3AQ8TCU5 1115 aa8.32□□□□□ -1.08
FDFT1-213ENST00000528729 FERMT2Q96AC1 680 aa8.32□□□□□ -1.08
FDFT1-213ENST00000528729 SLC9A7Q96T83 725 aa8.32□□□□□ -1.08
FDFT1-213ENST00000528729 OSMRQ99650 979 aa8.32□□□□□ -1.08
FDFT1-213ENST00000528729 GPRC5BQ9NZH0 403 aa8.32□□□□□ -1.08
FDFT1-213ENST00000528729 PCDHGB6Q9Y5F9 930 aa8.32□□□□□ -1.08
FDFT1-213ENST00000528729 PTPRMP28827 1452 aa8.32□□□□□ -1.08
FDFT1-213ENST00000528729 B4E171 279 aa8.31□□□□□ -1.08
FDFT1-213ENST00000528729 XPOTO43592 962 aaKnown RBP8.31□□□□□ -1.08
FDFT1-213ENST00000528729 CYP11A1P05108 521 aa8.31□□□□□ -1.08
FDFT1-213ENST00000528729 ITGAVP06756 1048 aa8.31□□□□□ -1.08
FDFT1-213ENST00000528729 ADH1AP07327 375 aa8.31□□□□□ -1.08
FDFT1-213ENST00000528729 KRT9P35527 623 aa8.31□□□□□ -1.08
FDFT1-213ENST00000528729 TDO2P48775 406 aa8.31□□□□□ -1.08
FDFT1-213ENST00000528729 SESN3P58005 492 aa8.31□□□□□ -1.08
FDFT1-213ENST00000528729 CACNB2Q08289 660 aaPredicted RBP8.31□□□□□ -1.08
FDFT1-213ENST00000528729 BLMHQ13867 455 aa8.31□□□□□ -1.08
FDFT1-213ENST00000528729 ARID5BQ14865 1188 aa8.31□□□□□ -1.08
FDFT1-213ENST00000528729 BBS9Q3SYG4 887 aa8.31□□□□□ -1.08
FDFT1-213ENST00000528729 CCDC38Q502W7 563 aa8.31□□□□□ -1.08
FDFT1-213ENST00000528729 CCDC158Q5M9N0 1113 aa8.31□□□□□ -1.08
FDFT1-213ENST00000528729 ATAT1Q5SQI0 421 aa8.31□□□□□ -1.08
FDFT1-213ENST00000528729 KRT78Q8N1N4 520 aa8.31□□□□□ -1.08
FDFT1-213ENST00000528729 MRPL50Q8N5N7 158 aaKnown RBP8.31□□□□□ -1.08
FDFT1-213ENST00000528729 OR13H1Q8NG92 308 aa8.31□□□□□ -1.08
FDFT1-213ENST00000528729 PTPRN2Q92932 1015 aa8.31□□□□□ -1.08
FDFT1-213ENST00000528729 VMP1Q96GC9 406 aa8.31□□□□□ -1.08
FDFT1-213ENST00000528729 BARD1Q99728 777 aaKnown RBP8.31□□□□□ -1.08
FDFT1-213ENST00000528729 ACO2Q99798 780 aaKnown RBP8.31□□□□□ -1.08
FDFT1-213ENST00000528729 GSX2Q9BZM3 304 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms