RNA–Protein interactions for RNA: ENST00000528471.1

CHRDL2-205, Transcript of chordin like 2, humanhuman

TSL 1 (best)

Gene CHRDL2, Length 1,321 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2-205ENST00000528471 ANTXR2P58335 489 aa16.14■□□□□ 0.17
CHRDL2-205ENST00000528471 ARHGEF16Q5VV41 709 aa16.14■□□□□ 0.17
CHRDL2-205ENST00000528471 SKAP1Q86WV1 359 aa16.14■□□□□ 0.17
CHRDL2-205ENST00000528471 MTMR8Q96EF0 704 aa16.14■□□□□ 0.17
CHRDL2-205ENST00000528471 RNPC3Q96LT9 517 aaKnown RBP16.14■□□□□ 0.17
CHRDL2-205ENST00000528471 TAAR1Q96RJ0 339 aa16.14■□□□□ 0.17
CHRDL2-205ENST00000528471 IWS1Q96ST2 819 aa16.14■□□□□ 0.17
CHRDL2-205ENST00000528471 PPP1R12CQ9BZL4 782 aa16.14■□□□□ 0.17
CHRDL2-205ENST00000528471 LSG1Q9H089 658 aaKnown RBP16.14■□□□□ 0.17
CHRDL2-205ENST00000528471 COL20A1Q9P218 1284 aa16.14■□□□□ 0.17
CHRDL2-205ENST00000528471 PCDHA1Q9Y5I3 950 aa16.14■□□□□ 0.17
CHRDL2-205ENST00000528471 PRC1O43663 620 aa16.13■□□□□ 0.17
CHRDL2-205ENST00000528471 EIF2AK2P19525 551 aaKnown RBP16.13■□□□□ 0.17
CHRDL2-205ENST00000528471 MCM5P33992 734 aa16.13■□□□□ 0.17
CHRDL2-205ENST00000528471 PSMC6P62333 389 aa16.13■□□□□ 0.17
CHRDL2-205ENST00000528471 TROAPQ12815 778 aa16.13■□□□□ 0.17
CHRDL2-205ENST00000528471 PPIGQ13427 754 aaKnown RBP eCLIP16.13■□□□□ 0.17
CHRDL2-205ENST00000528471 STXBP2Q15833 593 aa16.13■□□□□ 0.17
CHRDL2-205ENST00000528471 NFXL1Q6ZNB6 911 aa16.13■□□□□ 0.17
CHRDL2-205ENST00000528471 SLC43A3Q8NBI5 491 aa16.13■□□□□ 0.17
CHRDL2-205ENST00000528471 CTCFLQ8NI51 663 aaPredicted RBP16.13■□□□□ 0.17
CHRDL2-205ENST00000528471 PIGSQ96S52 555 aa16.13■□□□□ 0.17
CHRDL2-205ENST00000528471 COL6A3P12111 3177 aa16.13■□□□□ 0.17
CHRDL2-205ENST00000528471 SLC27A2O14975 620 aa16.12■□□□□ 0.17
CHRDL2-205ENST00000528471 PPP1R11O60927 126 aaPredicted RBP16.12■□□□□ 0.17
CHRDL2-205ENST00000528471 DDAH1O94760 285 aa16.12■□□□□ 0.17
CHRDL2-205ENST00000528471 CD4P01730 458 aa16.12■□□□□ 0.17
CHRDL2-205ENST00000528471 HSD17B4P51659 736 aa16.12■□□□□ 0.17
CHRDL2-205ENST00000528471 EPHB4P54760 987 aa16.12■□□□□ 0.17
CHRDL2-205ENST00000528471 PURAQ00577 322 aaKnown RBP16.12■□□□□ 0.17
CHRDL2-205ENST00000528471 MFSD5Q6N075 450 aa16.12■□□□□ 0.17
CHRDL2-205ENST00000528471 SEPT14Q6ZU15 432 aa16.12■□□□□ 0.17
CHRDL2-205ENST00000528471 ZNF654Q8IZM8 581 aa16.12■□□□□ 0.17
CHRDL2-205ENST00000528471 TMEM199Q8N511 208 aa16.12■□□□□ 0.17
CHRDL2-205ENST00000528471 IGDCC4Q8TDY8 1250 aa16.12■□□□□ 0.17
CHRDL2-205ENST00000528471 COPS5Q92905 334 aa16.12■□□□□ 0.17
CHRDL2-205ENST00000528471 MTG1Q9BT17 334 aaPredicted RBP16.12■□□□□ 0.17
CHRDL2-205ENST00000528471 RIOX1Q9H6W3 641 aa16.12■□□□□ 0.17
CHRDL2-205ENST00000528471 LY9Q9HBG7 655 aa16.12■□□□□ 0.17
CHRDL2-205ENST00000528471 PXMP2Q9NR77 195 aa16.12■□□□□ 0.17
CHRDL2-205ENST00000528471 GRIN2DO15399 1336 aa16.11■□□□□ 0.17
CHRDL2-205ENST00000528471 TANC1Q9C0D5 1861 aa16.11■□□□□ 0.17
CHRDL2-205ENST00000528471 CCDC69A6NI79 296 aa16.11■□□□□ 0.17
CHRDL2-205ENST00000528471 OPLAHO14841 1288 aa16.11■□□□□ 0.17
CHRDL2-205ENST00000528471 KPNA6O60684 536 aa16.11■□□□□ 0.17
CHRDL2-205ENST00000528471 ARIH2O95376 493 aa16.11■□□□□ 0.17
CHRDL2-205ENST00000528471 KIF5BP33176 963 aa16.11■□□□□ 0.17
CHRDL2-205ENST00000528471 FAM47CQ5HY64 1035 aa16.11■□□□□ 0.17
CHRDL2-205ENST00000528471 ZNF697Q5TEC3 545 aa16.11■□□□□ 0.17
CHRDL2-205ENST00000528471 RNF20Q5VTR2 975 aa16.11■□□□□ 0.17
CHRDL2-205ENST00000528471 CREB3L3Q68CJ9 461 aa16.11■□□□□ 0.17
CHRDL2-205ENST00000528471 PIBF1Q8WXW3 757 aa16.11■□□□□ 0.17
CHRDL2-205ENST00000528471 TMEM87BQ96K49 555 aa16.11■□□□□ 0.17
CHRDL2-205ENST00000528471 MTA3Q9BTC8 594 aa16.11■□□□□ 0.17
CHRDL2-205ENST00000528471 MYL10Q9BUA6 226 aa16.11■□□□□ 0.17
CHRDL2-205ENST00000528471 HIPK3Q9H422 1215 aa16.11■□□□□ 0.17
CHRDL2-205ENST00000528471 MAP3K20Q9NYL2 800 aaKnown RBP16.11■□□□□ 0.17
CHRDL2-205ENST00000528471 TRIP12Q14669 1992 aaPredicted RBP16.1■□□□□ 0.17
CHRDL2-205ENST00000528471 PNMA6FA0A0J9YX94 578 aa16.1■□□□□ 0.17
CHRDL2-205ENST00000528471 CYTH3O43739 400 aa16.1■□□□□ 0.17
CHRDL2-205ENST00000528471 B4GALT4O60513 344 aa16.1■□□□□ 0.17
CHRDL2-205ENST00000528471 GH1P01241 217 aa16.1■□□□□ 0.17
CHRDL2-205ENST00000528471 NR3C2P08235 984 aa16.1■□□□□ 0.17
CHRDL2-205ENST00000528471 HOXA13P31271 388 aaPredicted RBP16.1■□□□□ 0.17
CHRDL2-205ENST00000528471 CYP2C18P33260 490 aa16.1■□□□□ 0.17
CHRDL2-205ENST00000528471 GHRHRQ02643 423 aa16.1■□□□□ 0.17
CHRDL2-205ENST00000528471 SLC35G1Q2M3R5 365 aa16.1■□□□□ 0.17
CHRDL2-205ENST00000528471 SAMD3Q8N6K7 520 aa16.1■□□□□ 0.17
CHRDL2-205ENST00000528471 TRPV6Q9H1D0 765 aa16.1■□□□□ 0.17
CHRDL2-205ENST00000528471 ALDH8A1Q9H2A2 487 aaPredicted RBP16.1■□□□□ 0.17
CHRDL2-205ENST00000528471 MTMR10Q9NXD2 777 aa16.1■□□□□ 0.17
CHRDL2-205ENST00000528471 GBF1Q92538 1859 aa16.1■□□□□ 0.17
CHRDL2-205ENST00000528471 DOCK5Q9H7D0 1870 aa16.1■□□□□ 0.17
CHRDL2-205ENST00000528471 SCN5AQ14524 2016 aa16.09■□□□□ 0.17
CHRDL2-205ENST00000528471 A6NJR5 290 aa16.09■□□□□ 0.17
CHRDL2-205ENST00000528471 GCOM1H8Y6P7 765 aaPredicted RBP16.09■□□□□ 0.17
CHRDL2-205ENST00000528471 SH2B2O14492 632 aaPredicted RBP16.09■□□□□ 0.17
CHRDL2-205ENST00000528471 CDC45O75419 566 aa16.09■□□□□ 0.17
CHRDL2-205ENST00000528471 EIF3JO75822 258 aaKnown RBP16.09■□□□□ 0.17
CHRDL2-205ENST00000528471 POLR2MP0CAP2 368 aa16.09■□□□□ 0.17
CHRDL2-205ENST00000528471 MYCLP12524 364 aaPredicted RBP16.09■□□□□ 0.17
CHRDL2-205ENST00000528471 CSF2RAP15509 400 aa16.09■□□□□ 0.17
CHRDL2-205ENST00000528471 CHMP4BP1P59074 171 aa16.09■□□□□ 0.17
CHRDL2-205ENST00000528471 SMAD3P84022 425 aaKnown RBP16.09■□□□□ 0.17
CHRDL2-205ENST00000528471 LY6KQ17RY6 165 aa16.09■□□□□ 0.17
CHRDL2-205ENST00000528471 FAM109BQ6ICB4 259 aaPredicted RBP16.09■□□□□ 0.17
CHRDL2-205ENST00000528471 CCDC62Q6P9F0 684 aa16.09■□□□□ 0.17
CHRDL2-205ENST00000528471 TMTC2Q8N394 836 aa16.09■□□□□ 0.17
CHRDL2-205ENST00000528471 RRP36Q96EU6 259 aaKnown RBP16.09■□□□□ 0.17
CHRDL2-205ENST00000528471 CCDC136Q96JN2 1154 aa16.09■□□□□ 0.17
CHRDL2-205ENST00000528471 FAM161BQ96MY7 647 aa16.09■□□□□ 0.17
CHRDL2-205ENST00000528471 MAP3K14Q99558 947 aa16.09■□□□□ 0.17
CHRDL2-205ENST00000528471 SEC63Q9UGP8 760 aaKnown RBP16.09■□□□□ 0.17
CHRDL2-205ENST00000528471 MRVI1Q9Y6F6 885 aa16.09■□□□□ 0.17
CHRDL2-205ENST00000528471 MYO9BQ13459 2157 aa16.08■□□□□ 0.17
CHRDL2-205ENST00000528471 SUPT20HL2P0C7V6 817 aa16.08■□□□□ 0.16
CHRDL2-205ENST00000528471 CALM1P0DP23 149 aa16.08■□□□□ 0.16
CHRDL2-205ENST00000528471 CALM2P0DP24 149 aa16.08■□□□□ 0.16
CHRDL2-205ENST00000528471 CALM3P0DP25 149 aa16.08■□□□□ 0.16
CHRDL2-205ENST00000528471 GNAQP50148 359 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms