RNA–Protein interactions for RNA: ENST00000528036.5

PKP3-206, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-206ENST00000528036 LAMA3Q16787 3333 aa26.87■■□□□ 1.89
PKP3-206ENST00000528036 EIF3JO75822 258 aaKnown RBP26.86■■□□□ 1.89
PKP3-206ENST00000528036 SMARCA1P28370 1054 aa26.86■■□□□ 1.89
PKP3-206ENST00000528036 KIF5BP33176 963 aa26.86■■□□□ 1.89
PKP3-206ENST00000528036 MCM5P33992 734 aa26.86■■□□□ 1.89
PKP3-206ENST00000528036 HSD17B4P51659 736 aa26.86■■□□□ 1.89
PKP3-206ENST00000528036 IGDCC4Q8TDY8 1250 aa26.86■■□□□ 1.89
PKP3-206ENST00000528036 LZTS2Q9BRK4 669 aa26.86■■□□□ 1.89
PKP3-206ENST00000528036 MTG1Q9BT17 334 aaPredicted RBP26.86■■□□□ 1.89
PKP3-206ENST00000528036 LRRC37A2A6NM11 1700 aa26.85■■□□□ 1.89
PKP3-206ENST00000528036 A6NJR5 290 aa26.85■■□□□ 1.89
PKP3-206ENST00000528036 CFBP00751 764 aa26.85■■□□□ 1.89
PKP3-206ENST00000528036 GNAQP50148 359 aa26.85■■□□□ 1.89
PKP3-206ENST00000528036 C9orf50Q5SZB4 431 aa26.85■■□□□ 1.89
PKP3-206ENST00000528036 RNF20Q5VTR2 975 aa26.85■■□□□ 1.89
PKP3-206ENST00000528036 STOX1Q6ZVD7 989 aa26.85■■□□□ 1.89
PKP3-206ENST00000528036 RNPC3Q96LT9 517 aaKnown RBP26.85■■□□□ 1.89
PKP3-206ENST00000528036 TAAR1Q96RJ0 339 aa26.85■■□□□ 1.89
PKP3-206ENST00000528036 LSG1Q9H089 658 aaKnown RBP26.85■■□□□ 1.89
PKP3-206ENST00000528036 SZT2Q5T011 3432 aa26.84■■□□□ 1.89
PKP3-206ENST00000528036 PNMA6FA0A0J9YX94 578 aa26.84■■□□□ 1.89
PKP3-206ENST00000528036 DDAH1O94760 285 aa26.84■■□□□ 1.89
PKP3-206ENST00000528036 PURAQ00577 322 aaKnown RBP26.84■■□□□ 1.89
PKP3-206ENST00000528036 KCNV1Q6PIU1 500 aa26.84■■□□□ 1.89
PKP3-206ENST00000528036 CTCFLQ8NI51 663 aaPredicted RBP26.84■■□□□ 1.89
PKP3-206ENST00000528036 TBC1D5Q92609 795 aa26.84■■□□□ 1.89
PKP3-206ENST00000528036 MTMR10Q9NXD2 777 aa26.84■■□□□ 1.89
PKP3-206ENST00000528036 LCTP09848 1927 aa26.83■■□□□ 1.89
PKP3-206ENST00000528036 GH1P01241 217 aa26.82■■□□□ 1.88
PKP3-206ENST00000528036 NR3C2P08235 984 aa26.82■■□□□ 1.88
PKP3-206ENST00000528036 MYL3P08590 195 aa26.82■■□□□ 1.88
PKP3-206ENST00000528036 CALM1P0DP23 149 aa26.82■■□□□ 1.88
PKP3-206ENST00000528036 CALM2P0DP24 149 aa26.82■■□□□ 1.88
PKP3-206ENST00000528036 CALM3P0DP25 149 aa26.82■■□□□ 1.88
PKP3-206ENST00000528036 PTPN11Q06124 597 aaPredicted RBP26.82■■□□□ 1.88
PKP3-206ENST00000528036 ZNF697Q5TEC3 545 aa26.82■■□□□ 1.88
PKP3-206ENST00000528036 CCDC62Q6P9F0 684 aa26.82■■□□□ 1.88
PKP3-206ENST00000528036 PSRC1Q6PGN9 363 aaPredicted RBP26.82■■□□□ 1.88
PKP3-206ENST00000528036 MTIF3Q9H2K0 278 aaKnown RBP26.82■■□□□ 1.88
PKP3-206ENST00000528036 HIPK3Q9H422 1215 aa26.82■■□□□ 1.88
PKP3-206ENST00000528036 ANO2Q9NQ90 1003 aa26.82■■□□□ 1.88
PKP3-206ENST00000528036 PXMP2Q9NR77 195 aa26.82■■□□□ 1.88
PKP3-206ENST00000528036 STXBP5LQ9Y2K9 1186 aa26.82■■□□□ 1.88
PKP3-206ENST00000528036 GRIN2DO15399 1336 aa26.82■■□□□ 1.88
PKP3-206ENST00000528036 TMEM265A0A087WTH1 108 aa26.81■■□□□ 1.88
PKP3-206ENST00000528036 GCOM1H8Y6P7 765 aaPredicted RBP26.81■■□□□ 1.88
PKP3-206ENST00000528036 POLR2MP0CAP2 368 aa26.81■■□□□ 1.88
PKP3-206ENST00000528036 LIFRP42702 1097 aa26.81■■□□□ 1.88
PKP3-206ENST00000528036 ANTXR2P58335 489 aa26.81■■□□□ 1.88
PKP3-206ENST00000528036 TMEM63BQ5T3F8 832 aa26.81■■□□□ 1.88
PKP3-206ENST00000528036 NFRKBQ6P4R8 1299 aa26.81■■□□□ 1.88
PKP3-206ENST00000528036 HOMER1Q86YM7 354 aa26.81■■□□□ 1.88
PKP3-206ENST00000528036 SPZ1Q9BXG8 430 aa26.81■■□□□ 1.88
PKP3-206ENST00000528036 ALDH8A1Q9H2A2 487 aaPredicted RBP26.81■■□□□ 1.88
PKP3-206ENST00000528036 LY9Q9HBG7 655 aa26.81■■□□□ 1.88
PKP3-206ENST00000528036 COL20A1Q9P218 1284 aa26.81■■□□□ 1.88
PKP3-206ENST00000528036 TAF6LQ9Y6J9 622 aa26.81■■□□□ 1.88
PKP3-206ENST00000528036 SLC27A2O14975 620 aa26.8■■□□□ 1.88
PKP3-206ENST00000528036 PRC1O43663 620 aa26.8■■□□□ 1.88
PKP3-206ENST00000528036 NECTIN1Q15223 517 aa26.8■■□□□ 1.88
PKP3-206ENST00000528036 SEPT14Q6ZU15 432 aa26.8■■□□□ 1.88
PKP3-206ENST00000528036 CHST3Q7LGC8 479 aa26.8■■□□□ 1.88
PKP3-206ENST00000528036 ZNF654Q8IZM8 581 aa26.8■■□□□ 1.88
PKP3-206ENST00000528036 PIGSQ96S52 555 aa26.8■■□□□ 1.88
PKP3-206ENST00000528036 HSFX4A0A1B0GTS1 333 aaPredicted RBP26.79■■□□□ 1.88
PKP3-206ENST00000528036 HSFX3A0A1B0GWH4 333 aaPredicted RBP26.79■■□□□ 1.88
PKP3-206ENST00000528036 CCDC69A6NI79 296 aa26.79■■□□□ 1.88
PKP3-206ENST00000528036 EIF2AK2P19525 551 aaKnown RBP26.79■■□□□ 1.88
PKP3-206ENST00000528036 CREB3L3Q68CJ9 461 aa26.79■■□□□ 1.88
PKP3-206ENST00000528036 NFXL1Q6ZNB6 911 aa26.79■■□□□ 1.88
PKP3-206ENST00000528036 EMID1Q96A84 441 aaPredicted RBP26.79■■□□□ 1.88
PKP3-206ENST00000528036 RRP36Q96EU6 259 aaKnown RBP26.79■■□□□ 1.88
PKP3-206ENST00000528036 OPLAHO14841 1288 aa26.78■■□□□ 1.88
PKP3-206ENST00000528036 B4GALT4O60513 344 aa26.78■■□□□ 1.88
PKP3-206ENST00000528036 PPP1R11O60927 126 aaPredicted RBP26.78■■□□□ 1.88
PKP3-206ENST00000528036 TGFB3P10600 412 aa26.78■■□□□ 1.88
PKP3-206ENST00000528036 CASTP20810 708 aaKnown RBP26.78■■□□□ 1.88
PKP3-206ENST00000528036 EPHB4P54760 987 aa26.78■■□□□ 1.88
PKP3-206ENST00000528036 PSMC6P62333 389 aa26.78■■□□□ 1.88
PKP3-206ENST00000528036 LAMC2Q13753 1193 aa26.78■■□□□ 1.88
PKP3-206ENST00000528036 Q7L0L9 218 aa26.78■■□□□ 1.88
PKP3-206ENST00000528036 RPUSD2Q8IZ73 545 aaKnown RBP26.78■■□□□ 1.88
PKP3-206ENST00000528036 PDCD2LQ9BRP1 358 aa26.78■■□□□ 1.88
PKP3-206ENST00000528036 PPP1R12CQ9BZL4 782 aa26.78■■□□□ 1.88
PKP3-206ENST00000528036 SENP2Q9HC62 589 aa26.78■■□□□ 1.88
PKP3-206ENST00000528036 IL23AQ9NPF7 189 aa26.78■■□□□ 1.88
PKP3-206ENST00000528036 SEC63Q9UGP8 760 aaKnown RBP26.78■■□□□ 1.88
PKP3-206ENST00000528036 CYTH3O43739 400 aa26.77■■□□□ 1.88
PKP3-206ENST00000528036 STAM2O75886 525 aa26.77■■□□□ 1.88
PKP3-206ENST00000528036 CSF2RAP15509 400 aa26.77■■□□□ 1.88
PKP3-206ENST00000528036 PTGS1P23219 599 aa26.77■■□□□ 1.88
PKP3-206ENST00000528036 VSIG10LQ86VR7 867 aa26.77■■□□□ 1.88
PKP3-206ENST00000528036 TRPV6Q9H1D0 765 aa26.77■■□□□ 1.88
PKP3-206ENST00000528036 DDX41Q9UJV9 622 aaKnown RBP26.77■■□□□ 1.88
PKP3-206ENST00000528036 MRVI1Q9Y6F6 885 aa26.77■■□□□ 1.88
PKP3-206ENST00000528036 SH2B2O14492 632 aaPredicted RBP26.76■■□□□ 1.87
PKP3-206ENST00000528036 ARIH2O95376 493 aa26.76■■□□□ 1.87
PKP3-206ENST00000528036 TMEM240Q5SV17 173 aa26.76■■□□□ 1.87
PKP3-206ENST00000528036 COPS5Q92905 334 aa26.76■■□□□ 1.87
PKP3-206ENST00000528036 NOC4LQ9BVI4 516 aaKnown RBP26.76■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms