RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 PNMA6FA0A0J9YX94 578 aa18■□□□□ 0.47
CAPN1-213ENST00000527897 TXNP10599 105 aaKnown RBP18■□□□□ 0.47
CAPN1-213ENST00000527897 TRAF1Q13077 416 aa18■□□□□ 0.47
CAPN1-213ENST00000527897 SEPT14Q6ZU15 432 aa18■□□□□ 0.47
CAPN1-213ENST00000527897 CMTR1Q8N1G2 835 aaKnown RBP18■□□□□ 0.47
CAPN1-213ENST00000527897 SCFD2Q8WU76 684 aa18■□□□□ 0.47
CAPN1-213ENST00000527897 COPS5Q92905 334 aa18■□□□□ 0.47
CAPN1-213ENST00000527897 MTA3Q9BTC8 594 aa18■□□□□ 0.47
CAPN1-213ENST00000527897 SLC12A7Q9Y666 1083 aa18■□□□□ 0.47
CAPN1-213ENST00000527897 LAMA3Q16787 3333 aa18■□□□□ 0.47
CAPN1-213ENST00000527897 SZT2Q5T011 3432 aa17.99■□□□□ 0.47
CAPN1-213ENST00000527897 ARVCFO00192 962 aa17.99■□□□□ 0.47
CAPN1-213ENST00000527897 OPLAHO14841 1288 aa17.99■□□□□ 0.47
CAPN1-213ENST00000527897 PLEKHA8P1O95397 391 aa17.99■□□□□ 0.47
CAPN1-213ENST00000527897 MYL3P08590 195 aa17.99■□□□□ 0.47
CAPN1-213ENST00000527897 RAG1P15918 1043 aa17.99■□□□□ 0.47
CAPN1-213ENST00000527897 STXBP2Q15833 593 aa17.99■□□□□ 0.47
CAPN1-213ENST00000527897 ADCK5Q3MIX3 580 aa17.99■□□□□ 0.47
CAPN1-213ENST00000527897 FCHSD1Q86WN1 690 aa17.99■□□□□ 0.47
CAPN1-213ENST00000527897 MICU3Q86XE3 530 aa17.99■□□□□ 0.47
CAPN1-213ENST00000527897 RASEFQ8IZ41 740 aa17.99■□□□□ 0.47
CAPN1-213ENST00000527897 CCDC82Q8N4S0 544 aa17.99■□□□□ 0.47
CAPN1-213ENST00000527897 RRP36Q96EU6 259 aaKnown RBP17.99■□□□□ 0.47
CAPN1-213ENST00000527897 LRCH3Q96II8 777 aa17.99■□□□□ 0.47
CAPN1-213ENST00000527897 PXMP2Q9NR77 195 aa17.99■□□□□ 0.47
CAPN1-213ENST00000527897 SEC63Q9UGP8 760 aaKnown RBP17.99■□□□□ 0.47
CAPN1-213ENST00000527897 Q9Y3F1 56 aa17.99■□□□□ 0.47
CAPN1-213ENST00000527897 MROH7Q68CQ1 1323 aa17.98■□□□□ 0.47
CAPN1-213ENST00000527897 LAMA2P24043 3122 aaKnown RBP17.98■□□□□ 0.47
CAPN1-213ENST00000527897 RBM47A0AV96 593 aaKnown RBP17.98■□□□□ 0.47
CAPN1-213ENST00000527897 SOX1O00570 391 aaPredicted RBP17.98■□□□□ 0.47
CAPN1-213ENST00000527897 CALM1P0DP23 149 aa17.98■□□□□ 0.47
CAPN1-213ENST00000527897 CALM2P0DP24 149 aa17.98■□□□□ 0.47
CAPN1-213ENST00000527897 CALM3P0DP25 149 aa17.98■□□□□ 0.47
CAPN1-213ENST00000527897 MYCLP12524 364 aaPredicted RBP17.98■□□□□ 0.47
CAPN1-213ENST00000527897 LIFRP42702 1097 aa17.98■□□□□ 0.47
CAPN1-213ENST00000527897 GNAQP50148 359 aa17.98■□□□□ 0.47
CAPN1-213ENST00000527897 CPT1AP50416 773 aa17.98■□□□□ 0.47
CAPN1-213ENST00000527897 HSD17B4P51659 736 aa17.98■□□□□ 0.47
CAPN1-213ENST00000527897 PSMC6P62333 389 aa17.98■□□□□ 0.47
CAPN1-213ENST00000527897 FAAP100Q0VG06 881 aa17.98■□□□□ 0.47
CAPN1-213ENST00000527897 TTLL4Q14679 1199 aa17.98■□□□□ 0.47
CAPN1-213ENST00000527897 SYNE3Q6ZMZ3 975 aa17.98■□□□□ 0.47
CAPN1-213ENST00000527897 ANKRD33Q7Z3H0 272 aa17.98■□□□□ 0.47
CAPN1-213ENST00000527897 IWS1Q96ST2 819 aa17.98■□□□□ 0.47
CAPN1-213ENST00000527897 MAP3K14Q99558 947 aa17.98■□□□□ 0.47
CAPN1-213ENST00000527897 MAF1Q9H063 256 aa17.98■□□□□ 0.47
CAPN1-213ENST00000527897 NAP1L2Q9ULW6 460 aaPredicted RBP17.98■□□□□ 0.47
CAPN1-213ENST00000527897 GCOM1H8Y6P7 765 aaPredicted RBP17.97■□□□□ 0.47
CAPN1-213ENST00000527897 TLR3O15455 904 aaKnown RBP17.97■□□□□ 0.47
CAPN1-213ENST00000527897 CABYRO75952 493 aa17.97■□□□□ 0.47
CAPN1-213ENST00000527897 ARIH2O95376 493 aa17.97■□□□□ 0.47
CAPN1-213ENST00000527897 CENPBP07199 599 aaPredicted RBP17.97■□□□□ 0.47
CAPN1-213ENST00000527897 NR3C2P08235 984 aa17.97■□□□□ 0.47
CAPN1-213ENST00000527897 POLR2MP0CAP2 368 aa17.97■□□□□ 0.47
CAPN1-213ENST00000527897 NKX3-2P78367 333 aa17.97■□□□□ 0.47
CAPN1-213ENST00000527897 FGD1P98174 961 aa17.97■□□□□ 0.47
CAPN1-213ENST00000527897 ITGA7Q13683 1181 aa17.97■□□□□ 0.47
CAPN1-213ENST00000527897 KRT32Q14532 448 aa17.97■□□□□ 0.47
CAPN1-213ENST00000527897 LY6KQ17RY6 165 aa17.97■□□□□ 0.47
CAPN1-213ENST00000527897 BRDTQ58F21 947 aaPredicted RBP17.97■□□□□ 0.47
CAPN1-213ENST00000527897 SRBD1Q8N5C6 995 aaKnown RBP17.97■□□□□ 0.47
CAPN1-213ENST00000527897 TOX2Q96NM4 488 aa17.97■□□□□ 0.47
CAPN1-213ENST00000527897 SPZ1Q9BXG8 430 aa17.97■□□□□ 0.47
CAPN1-213ENST00000527897 PPP4R2Q9NY27 417 aa17.97■□□□□ 0.47
CAPN1-213ENST00000527897 KIAA1217Q5T5P2 1943 aa17.97■□□□□ 0.47
CAPN1-213ENST00000527897 hCG_1642624A0A1W2PR95 340 aa17.96■□□□□ 0.47
CAPN1-213ENST00000527897 NKRFO15226 690 aaKnown RBP eCLIP17.96■□□□□ 0.47
CAPN1-213ENST00000527897 ITGB8P26012 769 aa17.96■□□□□ 0.47
CAPN1-213ENST00000527897 CDK7P50613 346 aa17.96■□□□□ 0.47
CAPN1-213ENST00000527897 CHMP4BP1P59074 171 aa17.96■□□□□ 0.47
CAPN1-213ENST00000527897 DHX32Q7L7V1 743 aaKnown RBP17.96■□□□□ 0.47
CAPN1-213ENST00000527897 ZFP91Q96JP5 570 aaPredicted RBP17.96■□□□□ 0.47
CAPN1-213ENST00000527897 LZTS2Q9BRK4 669 aa17.96■□□□□ 0.47
CAPN1-213ENST00000527897 POLR3EQ9NVU0 708 aa17.96■□□□□ 0.47
CAPN1-213ENST00000527897 KIAA0355O15063 1070 aa17.95■□□□□ 0.46
CAPN1-213ENST00000527897 CPA1P15085 419 aa17.95■□□□□ 0.46
CAPN1-213ENST00000527897 FANCBQ8NB91 859 aa17.95■□□□□ 0.46
CAPN1-213ENST00000527897 JAKMIP1Q96N16 626 aaKnown RBP17.95■□□□□ 0.46
CAPN1-213ENST00000527897 PPP1R12CQ9BZL4 782 aa17.95■□□□□ 0.46
CAPN1-213ENST00000527897 MAP3K20Q9NYL2 800 aaKnown RBP17.95■□□□□ 0.46
CAPN1-213ENST00000527897 MRVI1Q9Y6F6 885 aa17.95■□□□□ 0.46
CAPN1-213ENST00000527897 SORBS3O60504 671 aa17.94■□□□□ 0.46
CAPN1-213ENST00000527897 EIF3JO75822 258 aaKnown RBP17.94■□□□□ 0.46
CAPN1-213ENST00000527897 REC8O95072 547 aa17.94■□□□□ 0.46
CAPN1-213ENST00000527897 EXOSC10Q01780 885 aaKnown RBP17.94■□□□□ 0.46
CAPN1-213ENST00000527897 SGMS1Q86VZ5 419 aa17.94■□□□□ 0.46
CAPN1-213ENST00000527897 FAM126BQ8IXS8 530 aa17.94■□□□□ 0.46
CAPN1-213ENST00000527897 SAMD3Q8N6K7 520 aa17.94■□□□□ 0.46
CAPN1-213ENST00000527897 IL31RAQ8NI17 732 aa17.94■□□□□ 0.46
CAPN1-213ENST00000527897 PPP1R13LQ8WUF5 828 aa17.94■□□□□ 0.46
CAPN1-213ENST00000527897 PDCD2LQ9BRP1 358 aa17.94■□□□□ 0.46
CAPN1-213ENST00000527897 GRIN2DO15399 1336 aa17.94■□□□□ 0.46
CAPN1-213ENST00000527897 KLF18A0A0U1RQI7 1052 aa17.93■□□□□ 0.46
CAPN1-213ENST00000527897 ZBTB43O43298 467 aa17.93■□□□□ 0.46
CAPN1-213ENST00000527897 GH1P01241 217 aa17.93■□□□□ 0.46
CAPN1-213ENST00000527897 CCND2P30279 289 aa17.93■□□□□ 0.46
CAPN1-213ENST00000527897 PURAQ00577 322 aaKnown RBP17.93■□□□□ 0.46
CAPN1-213ENST00000527897 GHRHRQ02643 423 aa17.93■□□□□ 0.46
CAPN1-213ENST00000527897 FPGSQ05932 587 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms