RNA–Protein interactions for RNA: ENST00000527739.5

CAPN1-211, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-211ENST00000527739 MB21D2Q8IYB1 491 aaPredicted RBP22.39■■□□□ 1.17
CAPN1-211ENST00000527739 IGDCC4Q8TDY8 1250 aa22.39■■□□□ 1.17
CAPN1-211ENST00000527739 SCFD2Q8WU76 684 aa22.39■■□□□ 1.17
CAPN1-211ENST00000527739 PIGSQ96S52 555 aa22.39■■□□□ 1.17
CAPN1-211ENST00000527739 RMDN3Q96TC7 470 aa22.39■■□□□ 1.17
CAPN1-211ENST00000527739 CDX2Q99626 313 aaPredicted RBP22.39■■□□□ 1.17
CAPN1-211ENST00000527739 COL25A1Q9BXS0 654 aaPredicted RBP22.39■■□□□ 1.17
CAPN1-211ENST00000527739 SEMA6BQ9H3T3 888 aa22.39■■□□□ 1.17
CAPN1-211ENST00000527739 GPHNQ9NQX3 736 aaPredicted RBP22.39■■□□□ 1.17
CAPN1-211ENST00000527739 RBM47A0AV96 593 aaKnown RBP22.38■■□□□ 1.17
CAPN1-211ENST00000527739 SLC27A2O14975 620 aa22.38■■□□□ 1.17
CAPN1-211ENST00000527739 PRC1O43663 620 aa22.38■■□□□ 1.17
CAPN1-211ENST00000527739 EIF2AK2P19525 551 aaKnown RBP22.38■■□□□ 1.17
CAPN1-211ENST00000527739 EDNRBP24530 442 aa22.38■■□□□ 1.17
CAPN1-211ENST00000527739 FPGSQ05932 587 aa22.38■■□□□ 1.17
CAPN1-211ENST00000527739 BRDTQ58F21 947 aaPredicted RBP22.38■■□□□ 1.17
CAPN1-211ENST00000527739 SEPT14Q6ZU15 432 aa22.38■■□□□ 1.17
CAPN1-211ENST00000527739 COPS5Q92905 334 aa22.38■■□□□ 1.17
CAPN1-211ENST00000527739 CCDC136Q96JN2 1154 aa22.38■■□□□ 1.17
CAPN1-211ENST00000527739 MAF1Q9H063 256 aa22.38■■□□□ 1.17
CAPN1-211ENST00000527739 TTYH1Q9H313 450 aaPredicted RBP22.38■■□□□ 1.17
CAPN1-211ENST00000527739 COL20A1Q9P218 1284 aa22.38■■□□□ 1.17
CAPN1-211ENST00000527739 TIMP1P01033 207 aa22.37■■□□□ 1.17
CAPN1-211ENST00000527739 CPT1AP50416 773 aa22.37■■□□□ 1.17
CAPN1-211ENST00000527739 TROAPQ12815 778 aa22.37■■□□□ 1.17
CAPN1-211ENST00000527739 TTLL4Q14679 1199 aa22.37■■□□□ 1.17
CAPN1-211ENST00000527739 CREB3L3Q68CJ9 461 aa22.37■■□□□ 1.17
CAPN1-211ENST00000527739 PPP1R12CQ9BZL4 782 aa22.37■■□□□ 1.17
CAPN1-211ENST00000527739 NKRFO15226 690 aaKnown RBP eCLIP22.36■■□□□ 1.17
CAPN1-211ENST00000527739 PPP1R11O60927 126 aaPredicted RBP22.36■■□□□ 1.17
CAPN1-211ENST00000527739 MCM5P33992 734 aa22.36■■□□□ 1.17
CAPN1-211ENST00000527739 TRAF1Q13077 416 aa22.36■■□□□ 1.17
CAPN1-211ENST00000527739 STXBP2Q15833 593 aa22.36■■□□□ 1.17
CAPN1-211ENST00000527739 FAM126BQ8IXS8 530 aa22.36■■□□□ 1.17
CAPN1-211ENST00000527739 CTCFLQ8NI51 663 aaPredicted RBP22.36■■□□□ 1.17
CAPN1-211ENST00000527739 MTMR8Q96EF0 704 aa22.36■■□□□ 1.17
CAPN1-211ENST00000527739 MYL10Q9BUA6 226 aa22.36■■□□□ 1.17
CAPN1-211ENST00000527739 RIOX1Q9H6W3 641 aa22.36■■□□□ 1.17
CAPN1-211ENST00000527739 POLR3EQ9NVU0 708 aa22.36■■□□□ 1.17
CAPN1-211ENST00000527739 TBX21Q9UL17 535 aa22.36■■□□□ 1.17
CAPN1-211ENST00000527739 CCDC69A6NI79 296 aa22.35■■□□□ 1.17
CAPN1-211ENST00000527739 HOXA13P31271 388 aaPredicted RBP22.35■■□□□ 1.17
CAPN1-211ENST00000527739 CHMP4BP1P59074 171 aa22.35■■□□□ 1.17
CAPN1-211ENST00000527739 SLC35G1Q2M3R5 365 aa22.35■■□□□ 1.17
CAPN1-211ENST00000527739 ZNF654Q8IZM8 581 aa22.35■■□□□ 1.17
CAPN1-211ENST00000527739 MYLIPQ8WY64 445 aa22.35■■□□□ 1.17
CAPN1-211ENST00000527739 IWS1Q96ST2 819 aa22.35■■□□□ 1.17
CAPN1-211ENST00000527739 LY9Q9HBG7 655 aa22.35■■□□□ 1.17
CAPN1-211ENST00000527739 PNMA6FA0A0J9YX94 578 aa22.34■■□□□ 1.17
CAPN1-211ENST00000527739 MYCLP12524 364 aaPredicted RBP22.34■■□□□ 1.17
CAPN1-211ENST00000527739 SMAD3P84022 425 aaKnown RBP22.34■■□□□ 1.17
CAPN1-211ENST00000527739 LY6KQ17RY6 165 aa22.34■■□□□ 1.17
CAPN1-211ENST00000527739 TMTC2Q8N394 836 aa22.34■■□□□ 1.17
CAPN1-211ENST00000527739 RNPC3Q96LT9 517 aaKnown RBP22.34■■□□□ 1.17
CAPN1-211ENST00000527739 TRPV6Q9H1D0 765 aa22.34■■□□□ 1.17
CAPN1-211ENST00000527739 GRIN2DO15399 1336 aa22.33■■□□□ 1.17
CAPN1-211ENST00000527739 VCANP13611 3396 aa22.33■■□□□ 1.17
CAPN1-211ENST00000527739 CYTH3O43739 400 aa22.33■■□□□ 1.17
CAPN1-211ENST00000527739 ARIH2O95376 493 aa22.33■■□□□ 1.17
CAPN1-211ENST00000527739 NR3C2P08235 984 aa22.33■■□□□ 1.17
CAPN1-211ENST00000527739 KIF5BP33176 963 aa22.33■■□□□ 1.17
CAPN1-211ENST00000527739 NECTIN1Q15223 517 aa22.33■■□□□ 1.17
CAPN1-211ENST00000527739 RNF20Q5VTR2 975 aa22.33■■□□□ 1.17
CAPN1-211ENST00000527739 MFSD5Q6N075 450 aa22.33■■□□□ 1.17
CAPN1-211ENST00000527739 FCHSD1Q86WN1 690 aa22.33■■□□□ 1.17
CAPN1-211ENST00000527739 TMEM199Q8N511 208 aa22.33■■□□□ 1.17
CAPN1-211ENST00000527739 SLC43A3Q8NBI5 491 aa22.33■■□□□ 1.17
CAPN1-211ENST00000527739 TMEM87BQ96K49 555 aa22.33■■□□□ 1.17
CAPN1-211ENST00000527739 MTG1Q9BT17 334 aaPredicted RBP22.33■■□□□ 1.17
CAPN1-211ENST00000527739 LRRC2Q9BYS8 371 aa22.33■■□□□ 1.17
CAPN1-211ENST00000527739 PXMP2Q9NR77 195 aa22.33■■□□□ 1.17
CAPN1-211ENST00000527739 GCOM1H8Y6P7 765 aaPredicted RBP22.32■■□□□ 1.16
CAPN1-211ENST00000527739 SH2B2O14492 632 aaPredicted RBP22.32■■□□□ 1.16
CAPN1-211ENST00000527739 OPLAHO14841 1288 aa22.32■■□□□ 1.16
CAPN1-211ENST00000527739 CDC45O75419 566 aa22.32■■□□□ 1.16
CAPN1-211ENST00000527739 DDAH1O94760 285 aa22.32■■□□□ 1.16
CAPN1-211ENST00000527739 CD4P01730 458 aa22.32■■□□□ 1.16
CAPN1-211ENST00000527739 POLR2MP0CAP2 368 aa22.32■■□□□ 1.16
CAPN1-211ENST00000527739 CYP2C18P33260 490 aa22.32■■□□□ 1.16
CAPN1-211ENST00000527739 HSD17B4P51659 736 aa22.32■■□□□ 1.16
CAPN1-211ENST00000527739 PURAQ00577 322 aaKnown RBP22.32■■□□□ 1.16
CAPN1-211ENST00000527739 FAM47CQ5HY64 1035 aa22.32■■□□□ 1.16
CAPN1-211ENST00000527739 RAB11FIP4Q86YS3 637 aa22.32■■□□□ 1.16
CAPN1-211ENST00000527739 SEZ6LQ9BYH1 1024 aa22.32■■□□□ 1.16
CAPN1-211ENST00000527739 EIF3JO75822 258 aaKnown RBP22.31■■□□□ 1.16
CAPN1-211ENST00000527739 GH1P01241 217 aa22.31■■□□□ 1.16
CAPN1-211ENST00000527739 CSF2RAP15509 400 aa22.31■■□□□ 1.16
CAPN1-211ENST00000527739 RXRAP19793 462 aa22.31■■□□□ 1.16
CAPN1-211ENST00000527739 PPIGQ13427 754 aaKnown RBP eCLIP22.31■■□□□ 1.162e-6■■■□□ 17.2
CAPN1-211ENST00000527739 MAFAQ8NHW3 353 aaPredicted RBP22.31■■□□□ 1.16
CAPN1-211ENST00000527739 PPP1R13LQ8WUF5 828 aa22.31■■□□□ 1.16
CAPN1-211ENST00000527739 RRP36Q96EU6 259 aaKnown RBP22.31■■□□□ 1.16
CAPN1-211ENST00000527739 MTA3Q9BTC8 594 aa22.31■■□□□ 1.16
CAPN1-211ENST00000527739 HIPK3Q9H422 1215 aa22.31■■□□□ 1.16
CAPN1-211ENST00000527739 MAP3K20Q9NYL2 800 aaKnown RBP22.31■■□□□ 1.16
CAPN1-211ENST00000527739 LCTP09848 1927 aa22.31■■□□□ 1.16
CAPN1-211ENST00000527739 A6NJR5 290 aa22.3■■□□□ 1.16
CAPN1-211ENST00000527739 B4GALT4O60513 344 aa22.3■■□□□ 1.16
CAPN1-211ENST00000527739 KPNA6O60684 536 aa22.3■■□□□ 1.16
CAPN1-211ENST00000527739 COL9A3Q14050 684 aaPredicted RBP22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms