RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 NLRP14Q86W24 1093 aa6.44□□□□□ -1.38
CD44-225ENST00000527326 VSTM4Q8IW00 320 aa6.44□□□□□ -1.38
CD44-225ENST00000527326 CCDC83Q8IWF9 413 aa6.44□□□□□ -1.38
CD44-225ENST00000527326 ARHGAP18Q8N392 663 aa6.44□□□□□ -1.38
CD44-225ENST00000527326 ARFGAP2Q8N6H7 521 aa6.44□□□□□ -1.38
CD44-225ENST00000527326 SMC1BQ8NDV3 1235 aa6.44□□□□□ -1.38
CD44-225ENST00000527326 MYCBPAPQ8TBZ2 947 aa6.44□□□□□ -1.38
CD44-225ENST00000527326 ANKRD24Q8TF21 1146 aa6.44□□□□□ -1.38
CD44-225ENST00000527326 RSPH1Q8WYR4 309 aa6.44□□□□□ -1.38
CD44-225ENST00000527326 KCNN1Q92952 543 aa6.44□□□□□ -1.38
CD44-225ENST00000527326 ZNF653Q96CK0 615 aa6.44□□□□□ -1.38
CD44-225ENST00000527326 SCARF2Q96GP6 870 aaPredicted RBP6.44□□□□□ -1.38
CD44-225ENST00000527326 NAPGQ99747 312 aaPredicted RBP6.44□□□□□ -1.38
CD44-225ENST00000527326 CORO1BQ9BR76 489 aa6.44□□□□□ -1.38
CD44-225ENST00000527326 TCHPQ9BT92 498 aa6.44□□□□□ -1.38
CD44-225ENST00000527326 NAA15Q9BXJ9 866 aaKnown RBP6.44□□□□□ -1.38
CD44-225ENST00000527326 VCXQ9H320 206 aa6.44□□□□□ -1.38
CD44-225ENST00000527326 VRTNQ9H8Y1 702 aa6.44□□□□□ -1.38
CD44-225ENST00000527326 ANO2Q9NQ90 1003 aa6.44□□□□□ -1.38
CD44-225ENST00000527326 ENAMQ9NRM1 1142 aa6.44□□□□□ -1.38
CD44-225ENST00000527326 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.44□□□□□ -1.38
CD44-225ENST00000527326 GALNT8Q9NY28 637 aa6.44□□□□□ -1.38
CD44-225ENST00000527326 BAIAP2L1Q9UHR4 511 aa6.44□□□□□ -1.38
CD44-225ENST00000527326 CFAP45Q9UL16 551 aa6.44□□□□□ -1.38
CD44-225ENST00000527326 PALD1Q9ULE6 856 aa6.44□□□□□ -1.38
CD44-225ENST00000527326 ZNF148Q9UQR1 794 aa6.44□□□□□ -1.38
CD44-225ENST00000527326 CHMP3Q9Y3E7 222 aa6.44□□□□□ -1.38
CD44-225ENST00000527326 C2CD2Q9Y426 696 aa6.44□□□□□ -1.38
CD44-225ENST00000527326 CTDP1Q9Y5B0 961 aaPredicted RBP6.44□□□□□ -1.38
CD44-225ENST00000527326 BZW2Q9Y6E2 419 aaKnown RBP6.44□□□□□ -1.38
CD44-225ENST00000527326 IVNS1ABPQ9Y6Y0 642 aa6.44□□□□□ -1.38
CD44-225ENST00000527326 ABCC3O15438 1527 aa6.44□□□□□ -1.38
CD44-225ENST00000527326 NUP155O75694 1391 aa6.44□□□□□ -1.38
CD44-225ENST00000527326 CHD2O14647 1828 aaKnown RBP6.43□□□□□ -1.38
CD44-225ENST00000527326 NPHP4O75161 1426 aaPredicted RBP6.43□□□□□ -1.38
CD44-225ENST00000527326 GOLGA8AA7E2F4 631 aa6.43□□□□□ -1.38
CD44-225ENST00000527326 E7ENQ6 273 aa6.43□□□□□ -1.38
CD44-225ENST00000527326 AGPSO00116 658 aa6.43□□□□□ -1.38
CD44-225ENST00000527326 N4BP3O15049 544 aa6.43□□□□□ -1.38
CD44-225ENST00000527326 HSF2BPO75031 334 aa6.43□□□□□ -1.38
CD44-225ENST00000527326 FLOT1O75955 427 aa6.43□□□□□ -1.38
CD44-225ENST00000527326 TPPPO94811 219 aa6.43□□□□□ -1.38
CD44-225ENST00000527326 SSBP05455 408 aaKnown RBP eCLIP6.43□□□□□ -1.38
CD44-225ENST00000527326 TRIM21P19474 475 aaKnown RBP6.43□□□□□ -1.38
CD44-225ENST00000527326 FLT3P36888 993 aa6.43□□□□□ -1.38
CD44-225ENST00000527326 PHKA2P46019 1235 aa6.43□□□□□ -1.38
CD44-225ENST00000527326 NEK2P51955 445 aa6.43□□□□□ -1.38
CD44-225ENST00000527326 AK2P54819 239 aa6.43□□□□□ -1.38
CD44-225ENST00000527326 HDAC4P56524 1084 aa6.43□□□□□ -1.38
CD44-225ENST00000527326 FANCCQ00597 558 aa6.43□□□□□ -1.38
CD44-225ENST00000527326 CBX3Q13185 183 aa6.43□□□□□ -1.38
CD44-225ENST00000527326 PDCLQ13371 301 aa6.43□□□□□ -1.38
CD44-225ENST00000527326 BTG3Q14201 252 aaPredicted RBP6.43□□□□□ -1.38
CD44-225ENST00000527326 LARP1BQ659C4 914 aaKnown RBP6.43□□□□□ -1.38
CD44-225ENST00000527326 ATL3Q6DD88 541 aa6.43□□□□□ -1.38
CD44-225ENST00000527326 IQCEQ6IPM2 695 aa6.43□□□□□ -1.38
CD44-225ENST00000527326 OTUD6AQ7L8S5 288 aa6.43□□□□□ -1.38
CD44-225ENST00000527326 CACNA2D4Q7Z3S7 1137 aa6.43□□□□□ -1.38
CD44-225ENST00000527326 MAATS1Q7Z4T9 603 aa6.43□□□□□ -1.38
CD44-225ENST00000527326 TMEM110Q86TL2 294 aa6.43□□□□□ -1.38
CD44-225ENST00000527326 TMEM139Q8IV31 216 aa6.43□□□□□ -1.38
CD44-225ENST00000527326 LRRC43Q8N309 656 aa6.43□□□□□ -1.38
CD44-225ENST00000527326 STAG2Q8N3U4 1231 aa6.43□□□□□ -1.38
CD44-225ENST00000527326 CCT8L2Q96SF2 557 aa6.43□□□□□ -1.38
CD44-225ENST00000527326 ZSCAN10Q96SZ4 725 aaPredicted RBP6.43□□□□□ -1.38
CD44-225ENST00000527326 FAM192AQ9GZU8 254 aa6.43□□□□□ -1.38
CD44-225ENST00000527326 ZSWIM4Q9H7M6 989 aa6.43□□□□□ -1.38
CD44-225ENST00000527326 GPAMQ9HCL2 828 aa6.43□□□□□ -1.38
CD44-225ENST00000527326 PICK1Q9NRD5 415 aa6.43□□□□□ -1.38
CD44-225ENST00000527326 TBC1D7Q9P0N9 293 aa6.43□□□□□ -1.38
CD44-225ENST00000527326 FAM184BQ9ULE4 1060 aa6.43□□□□□ -1.38
CD44-225ENST00000527326 MAPK8IP1Q9UQF2 711 aa6.43□□□□□ -1.38
CD44-225ENST00000527326 AOX1Q06278 1338 aa6.43□□□□□ -1.38
CD44-225ENST00000527326 TUBGCP6Q96RT7 1819 aa6.43□□□□□ -1.38
CD44-225ENST00000527326 CPSF1Q10570 1443 aaKnown RBP6.42□□□□□ -1.38
CD44-225ENST00000527326 KNDC1Q76NI1 1749 aa6.42□□□□□ -1.38
CD44-225ENST00000527326 A0A1B0GVL5 298 aa6.42□□□□□ -1.38
CD44-225ENST00000527326 C5orf60A6NFR6 353 aa6.42□□□□□ -1.38
CD44-225ENST00000527326 SLC27A2O14975 620 aa6.42□□□□□ -1.38
CD44-225ENST00000527326 BIRC5O15392 142 aa6.42□□□□□ -1.38
CD44-225ENST00000527326 RAPGEF3O95398 923 aa6.42□□□□□ -1.38
CD44-225ENST00000527326 BAG3O95817 575 aa6.42□□□□□ -1.38
CD44-225ENST00000527326 XBP1P17861 261 aa6.42□□□□□ -1.38
CD44-225ENST00000527326 RHBDL3P58872 404 aa6.42□□□□□ -1.38
CD44-225ENST00000527326 SLC7A5Q01650 507 aa6.42□□□□□ -1.38
CD44-225ENST00000527326 ME3Q16798 604 aa6.42□□□□□ -1.38
CD44-225ENST00000527326 GNASQ5JWF2 1037 aa6.42□□□□□ -1.38
CD44-225ENST00000527326 ZMYM1Q5SVZ6 1142 aa6.42□□□□□ -1.38
CD44-225ENST00000527326 SOGA3Q5TF21 947 aa6.42□□□□□ -1.38
CD44-225ENST00000527326 WDR78Q5VTH9 848 aa6.42□□□□□ -1.38
CD44-225ENST00000527326 TMEM214Q6NUQ4 689 aaKnown RBP6.42□□□□□ -1.38
CD44-225ENST00000527326 Q6ZUG5 572 aa6.42□□□□□ -1.38
CD44-225ENST00000527326 NCCRP1Q6ZVX7 275 aaPredicted RBP6.42□□□□□ -1.38
CD44-225ENST00000527326 ZNF365Q70YC5 407 aa6.42□□□□□ -1.38
CD44-225ENST00000527326 RUFY3Q7L099 469 aa6.42□□□□□ -1.38
CD44-225ENST00000527326 RSPH3Q86UC2 560 aa6.42□□□□□ -1.38
CD44-225ENST00000527326 RNF135Q8IUD6 432 aa6.42□□□□□ -1.38
CD44-225ENST00000527326 CACTIN-AS1Q8N1I8 211 aa6.42□□□□□ -1.38
CD44-225ENST00000527326 ARL10Q8N8L6 244 aa6.42□□□□□ -1.38
CD44-225ENST00000527326 CCDC63Q8NA47 563 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms