RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 TXNP10599 105 aaKnown RBP18.93■□□□□ 0.62
PTPRU-210ENST00000527027 BMP1P13497 986 aa18.93■□□□□ 0.62
PTPRU-210ENST00000527027 TICAM2Q86XR7 235 aa18.93■□□□□ 0.62
PTPRU-210ENST00000527027 COPS5Q92905 334 aa18.93■□□□□ 0.62
PTPRU-210ENST00000527027 SLC9A7Q96T83 725 aa18.93■□□□□ 0.62
PTPRU-210ENST00000527027 WDR19Q8NEZ3 1342 aa18.93■□□□□ 0.62
PTPRU-210ENST00000527027 RFXAPO00287 272 aa18.92■□□□□ 0.62
PTPRU-210ENST00000527027 SNHG28P0DPA3 235 aa18.92■□□□□ 0.62
PTPRU-210ENST00000527027 HSPD1P10809 573 aaKnown RBP18.92■□□□□ 0.62
PTPRU-210ENST00000527027 PDE1AP54750 535 aa18.92■□□□□ 0.62
PTPRU-210ENST00000527027 BFSP2Q13515 415 aa18.92■□□□□ 0.62
PTPRU-210ENST00000527027 AAK1Q2M2I8 961 aa18.92■□□□□ 0.62
PTPRU-210ENST00000527027 RGS22Q8NE09 1264 aa18.92■□□□□ 0.62
PTPRU-210ENST00000527027 PPP1R13LQ8WUF5 828 aa18.92■□□□□ 0.62
PTPRU-210ENST00000527027 FTOQ9C0B1 505 aaKnown RBP eCLIP18.92■□□□□ 0.62
PTPRU-210ENST00000527027 MTCH2Q9Y6C9 303 aa18.92■□□□□ 0.62
PTPRU-210ENST00000527027 LCTP09848 1927 aa18.92■□□□□ 0.62
PTPRU-210ENST00000527027 A0A0D9SFI3 127 aa18.91■□□□□ 0.62
PTPRU-210ENST00000527027 KIF28PB7ZC32 967 aa18.91■□□□□ 0.62
PTPRU-210ENST00000527027 GTPBP6O43824 516 aaPredicted RBP18.91■□□□□ 0.62
PTPRU-210ENST00000527027 PCP11498 1178 aaKnown RBP18.91■□□□□ 0.62
PTPRU-210ENST00000527027 TFF2Q03403 129 aa18.91■□□□□ 0.62
PTPRU-210ENST00000527027 SKIV2LQ15477 1246 aaKnown RBP18.91■□□□□ 0.62
PTPRU-210ENST00000527027 MFSD6Q6ZSS7 791 aa18.91■□□□□ 0.62
PTPRU-210ENST00000527027 CERS4Q9HA82 394 aa18.91■□□□□ 0.62
PTPRU-210ENST00000527027 NOD1Q9Y239 953 aa18.91■□□□□ 0.62
PTPRU-210ENST00000527027 ZMYM6O95789 1325 aa18.91■□□□□ 0.62
PTPRU-210ENST00000527027 GBF1Q92538 1859 aa18.9■□□□□ 0.62
PTPRU-210ENST00000527027 ARIH2O95376 493 aa18.9■□□□□ 0.62
PTPRU-210ENST00000527027 HAND2P61296 217 aa18.9■□□□□ 0.62
PTPRU-210ENST00000527027 GPATCH4Q5T3I0 446 aaKnown RBP18.9■□□□□ 0.62
PTPRU-210ENST00000527027 HERC6Q8IVU3 1022 aa18.9■□□□□ 0.62
PTPRU-210ENST00000527027 MAF1Q9H063 256 aa18.9■□□□□ 0.62
PTPRU-210ENST00000527027 TAP1Q03518 808 aa18.89■□□□□ 0.61
PTPRU-210ENST00000527027 CCDC62Q6P9F0 684 aa18.89■□□□□ 0.61
PTPRU-210ENST00000527027 ZNF589Q86UQ0 364 aaPredicted RBP18.89■□□□□ 0.61
PTPRU-210ENST00000527027 SCN10AQ9Y5Y9 1956 aa18.88■□□□□ 0.61
PTPRU-210ENST00000527027 BAIAP3O94812 1187 aa18.88■□□□□ 0.61
PTPRU-210ENST00000527027 GOLGA8HP0CJ92 632 aa18.88■□□□□ 0.61
PTPRU-210ENST00000527027 CHMP4BP1P59074 171 aa18.88■□□□□ 0.61
PTPRU-210ENST00000527027 NMIQ13287 307 aaPredicted RBP18.88■□□□□ 0.61
PTPRU-210ENST00000527027 PTGISQ16647 500 aa18.88■□□□□ 0.61
PTPRU-210ENST00000527027 USH1GQ495M9 461 aa18.88■□□□□ 0.61
PTPRU-210ENST00000527027 DGKHQ86XP1 1220 aa18.88■□□□□ 0.61
PTPRU-210ENST00000527027 AFG1LQ8WV93 481 aa18.88■□□□□ 0.61
PTPRU-210ENST00000527027 ARNTL2Q8WYA1 636 aa18.88■□□□□ 0.61
PTPRU-210ENST00000527027 ESR2Q92731 530 aa18.88■□□□□ 0.61
PTPRU-210ENST00000527027 NECAB3Q96P71 396 aaPredicted RBP18.88■□□□□ 0.61
PTPRU-210ENST00000527027 UBA5Q9GZZ9 404 aa18.88■□□□□ 0.61
PTPRU-210ENST00000527027 RNF41Q9H4P4 317 aaPredicted RBP18.88■□□□□ 0.61
PTPRU-210ENST00000527027 RAPGEFL1Q9UHV5 662 aa18.88■□□□□ 0.61
PTPRU-210ENST00000527027 PRRC2BQ5JSZ5 2229 aaKnown RBP18.88■□□□□ 0.61
PTPRU-210ENST00000527027 EPOPA6NHQ4 379 aa18.87■□□□□ 0.61
PTPRU-210ENST00000527027 KCNQ1P51787 676 aa18.87■□□□□ 0.61
PTPRU-210ENST00000527027 CCDC171Q6TFL3 1326 aa18.87■□□□□ 0.61
PTPRU-210ENST00000527027 SESTD1Q86VW0 696 aa18.87■□□□□ 0.61
PTPRU-210ENST00000527027 CCDC155Q8N6L0 562 aa18.87■□□□□ 0.61
PTPRU-210ENST00000527027 CAGE1Q8TC20 777 aa18.87■□□□□ 0.61
PTPRU-210ENST00000527027 TBC1D5Q92609 795 aa18.87■□□□□ 0.61
PTPRU-210ENST00000527027 CPVLQ9H3G5 476 aa18.87■□□□□ 0.61
PTPRU-210ENST00000527027 COG5Q9UP83 839 aa18.87■□□□□ 0.61
PTPRU-210ENST00000527027 ARHGEF15O94989 841 aa18.86■□□□□ 0.61
PTPRU-210ENST00000527027 GH1P01241 217 aa18.86■□□□□ 0.61
PTPRU-210ENST00000527027 MMP3P08254 477 aa18.86■□□□□ 0.61
PTPRU-210ENST00000527027 KCNJ6P48051 423 aa18.86■□□□□ 0.61
PTPRU-210ENST00000527027 LY6KQ17RY6 165 aa18.86■□□□□ 0.61
PTPRU-210ENST00000527027 SEPT14Q6ZU15 432 aa18.86■□□□□ 0.61
PTPRU-210ENST00000527027 TBC1D10CQ8IV04 446 aa18.86■□□□□ 0.61
PTPRU-210ENST00000527027 NSUN6Q8TEA1 469 aaKnown RBP18.86■□□□□ 0.61
PTPRU-210ENST00000527027 AFAP1L1Q8TED9 768 aa18.86■□□□□ 0.61
PTPRU-210ENST00000527027 TAAR1Q96RJ0 339 aa18.86■□□□□ 0.61
PTPRU-210ENST00000527027 ZKSCAN3Q9BRR0 538 aa18.86■□□□□ 0.61
PTPRU-210ENST00000527027 SCN5AQ14524 2016 aa18.85■□□□□ 0.61
PTPRU-210ENST00000527027 ABCB11O95342 1321 aa18.85■□□□□ 0.61
PTPRU-210ENST00000527027 TRIM6-TRIM34B2RNG4 842 aa18.85■□□□□ 0.61
PTPRU-210ENST00000527027 TLL1O43897 1013 aa18.85■□□□□ 0.61
PTPRU-210ENST00000527027 NT5C2P49902 561 aa18.85■□□□□ 0.61
PTPRU-210ENST00000527027 MFAP1P55081 439 aaKnown RBP18.85■□□□□ 0.61
PTPRU-210ENST00000527027 ARHGAP1Q07960 439 aa18.85■□□□□ 0.61
PTPRU-210ENST00000527027 GPNMBQ14956 572 aa18.85■□□□□ 0.61
PTPRU-210ENST00000527027 STXBP2Q15833 593 aa18.85■□□□□ 0.61
PTPRU-210ENST00000527027 CCDC178Q5BJE1 867 aa18.85■□□□□ 0.61
PTPRU-210ENST00000527027 KRT40Q6A162 431 aa18.85■□□□□ 0.61
PTPRU-210ENST00000527027 GDF6Q6KF10 455 aaPredicted RBP18.85■□□□□ 0.61
PTPRU-210ENST00000527027 SYTL5Q8TDW5 730 aaPredicted RBP18.85■□□□□ 0.61
PTPRU-210ENST00000527027 KAT2BQ92831 832 aa18.85■□□□□ 0.61
PTPRU-210ENST00000527027 IWS1Q96ST2 819 aa18.85■□□□□ 0.61
PTPRU-210ENST00000527027 C1QTNF1Q9BXJ1 281 aa18.85■□□□□ 0.61
PTPRU-210ENST00000527027 ZNF213O14771 459 aa18.84■□□□□ 0.61
PTPRU-210ENST00000527027 PARNO95453 639 aaKnown RBP18.84■□□□□ 0.61
PTPRU-210ENST00000527027 SELPP16109 830 aa18.84■□□□□ 0.61
PTPRU-210ENST00000527027 CASTP20810 708 aaKnown RBP18.84■□□□□ 0.61
PTPRU-210ENST00000527027 GRB10Q13322 594 aa18.84■□□□□ 0.61
PTPRU-210ENST00000527027 HDAC1Q13547 482 aaPredicted RBP18.84■□□□□ 0.61
PTPRU-210ENST00000527027 CDC37Q16543 378 aaPredicted RBP18.84■□□□□ 0.61
PTPRU-210ENST00000527027 CHST3Q7LGC8 479 aa18.84■□□□□ 0.61
PTPRU-210ENST00000527027 MCF2L2Q86YR7 1114 aa18.84■□□□□ 0.61
PTPRU-210ENST00000527027 ADGRF4Q8IZF3 695 aa18.84■□□□□ 0.61
PTPRU-210ENST00000527027 PNMA1Q8ND90 353 aa18.84■□□□□ 0.61
PTPRU-210ENST00000527027 CTAGE1Q96RT6 745 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms