RNA–Protein interactions for RNA: ENST00000526869.1

SMCO4-203, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 1 (best)

Gene SMCO4, Length 374 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-203ENST00000526869 PDIA5Q14554 519 aa23.19■■□□□ 1.3
SMCO4-203ENST00000526869 STX1AQ16623 288 aa23.19■■□□□ 1.3
SMCO4-203ENST00000526869 MAP1SQ66K74 1059 aaPredicted RBP23.19■■□□□ 1.3
SMCO4-203ENST00000526869 MOB2Q70IA6 237 aa23.19■■□□□ 1.3
SMCO4-203ENST00000526869 IQUBQ8NA54 791 aa23.19■■□□□ 1.3
SMCO4-203ENST00000526869 CNKSR2Q8WXI2 1034 aa23.19■■□□□ 1.3
SMCO4-203ENST00000526869 OTUD5Q96G74 571 aa23.19■■□□□ 1.3
SMCO4-203ENST00000526869 RRAGCQ9HB90 399 aa23.19■■□□□ 1.3
SMCO4-203ENST00000526869 TUBE1Q9UJT0 475 aa23.19■■□□□ 1.3
SMCO4-203ENST00000526869 IRF6O14896 467 aa23.18■■□□□ 1.3
SMCO4-203ENST00000526869 ALAS1P13196 640 aa23.18■■□□□ 1.3
SMCO4-203ENST00000526869 E2F4Q16254 413 aa23.18■■□□□ 1.3
SMCO4-203ENST00000526869 CPXCR1Q8N123 301 aa23.18■■□□□ 1.3
SMCO4-203ENST00000526869 KCNMB3Q9NPA1 279 aa23.18■■□□□ 1.3
SMCO4-203ENST00000526869 SERTAD1Q9UHV2 236 aa23.18■■□□□ 1.3
SMCO4-203ENST00000526869 ZNF214Q9UL59 606 aaPredicted RBP23.18■■□□□ 1.3
SMCO4-203ENST00000526869 COL11A1P12107 1806 aaPredicted RBP23.17■■□□□ 1.3
SMCO4-203ENST00000526869 RPTORQ8N122 1335 aa23.17■■□□□ 1.3
SMCO4-203ENST00000526869 A0A087X0B3 334 aa23.17■■□□□ 1.3
SMCO4-203ENST00000526869 SPDYE16A6NNV3 312 aaPredicted RBP23.17■■□□□ 1.3
SMCO4-203ENST00000526869 SLC26A4O43511 780 aa23.17■■□□□ 1.3
SMCO4-203ENST00000526869 XRCC6P12956 609 aaKnown RBP eCLIP23.17■■□□□ 1.3
SMCO4-203ENST00000526869 UBA7P41226 1012 aa23.17■■□□□ 1.3
SMCO4-203ENST00000526869 MDM2Q00987 491 aaPredicted RBP23.17■■□□□ 1.3
SMCO4-203ENST00000526869 UVSSAQ2YD98 709 aa23.17■■□□□ 1.3
SMCO4-203ENST00000526869 SH3RF1Q7Z6J0 888 aa23.17■■□□□ 1.3
SMCO4-203ENST00000526869 SLFN12Q8IYM2 578 aa23.17■■□□□ 1.3
SMCO4-203ENST00000526869 CEP57L1Q8IYX8 460 aa23.17■■□□□ 1.3
SMCO4-203ENST00000526869 MB21D1Q8N884 522 aa23.17■■□□□ 1.3
SMCO4-203ENST00000526869 TBC1D5Q92609 795 aa23.17■■□□□ 1.3
SMCO4-203ENST00000526869 ANO10Q9NW15 660 aa23.17■■□□□ 1.3
SMCO4-203ENST00000526869 CCDC39Q9UFE4 941 aa23.17■■□□□ 1.3
SMCO4-203ENST00000526869 FRMPD4Q14CM0 1322 aa23.16■■□□□ 1.3
SMCO4-203ENST00000526869 NFIBO00712 420 aa23.16■■□□□ 1.3
SMCO4-203ENST00000526869 POSTNQ15063 836 aa23.16■■□□□ 1.3
SMCO4-203ENST00000526869 LBX2Q6XYB7 198 aa23.16■■□□□ 1.3
SMCO4-203ENST00000526869 FASTKD5Q7L8L6 764 aaKnown RBP23.16■■□□□ 1.3
SMCO4-203ENST00000526869 FCHSD1Q86WN1 690 aa23.16■■□□□ 1.3
SMCO4-203ENST00000526869 PDILTQ8N807 584 aa23.16■■□□□ 1.3
SMCO4-203ENST00000526869 HAS1Q92839 578 aa23.16■■□□□ 1.3
SMCO4-203ENST00000526869 DHX58Q96C10 678 aa23.16■■□□□ 1.3
SMCO4-203ENST00000526869 OPTNQ96CV9 577 aa23.16■■□□□ 1.3
SMCO4-203ENST00000526869 TEX13BQ9BXU2 312 aa23.16■■□□□ 1.3
SMCO4-203ENST00000526869 TRAF5O00463 557 aa23.15■■□□□ 1.3
SMCO4-203ENST00000526869 TXKP42681 527 aa23.15■■□□□ 1.3
SMCO4-203ENST00000526869 PABPC4Q13310 644 aaKnown RBP eCLIP23.15■■□□□ 1.3
SMCO4-203ENST00000526869 ZRSR1Q15695 479 aaKnown RBP23.15■■□□□ 1.3
SMCO4-203ENST00000526869 TREML2Q5T2D2 321 aa23.15■■□□□ 1.3
SMCO4-203ENST00000526869 GADL1Q6ZQY3 521 aa23.15■■□□□ 1.3
SMCO4-203ENST00000526869 CABP7Q86V35 215 aa23.15■■□□□ 1.3
SMCO4-203ENST00000526869 FAM200AQ8TCP9 573 aa23.15■■□□□ 1.3
SMCO4-203ENST00000526869 WNK4Q96J92 1243 aa23.15■■□□□ 1.3
SMCO4-203ENST00000526869 FAM20AQ96MK3 541 aa23.15■■□□□ 1.3
SMCO4-203ENST00000526869 TRERF1Q96PN7 1200 aa23.15■■□□□ 1.3
SMCO4-203ENST00000526869 CUEDC2Q9H467 287 aa23.15■■□□□ 1.3
SMCO4-203ENST00000526869 MAGEF1Q9HAY2 307 aa23.15■■□□□ 1.3
SMCO4-203ENST00000526869 DISC1Q9NRI5 854 aa23.15■■□□□ 1.3
SMCO4-203ENST00000526869 RNF146Q9NTX7 359 aa23.15■■□□□ 1.3
SMCO4-203ENST00000526869 AGTPBP1Q9UPW5 1226 aa23.15■■□□□ 1.3
SMCO4-203ENST00000526869 TECP42680 631 aa23.14■■□□□ 1.29
SMCO4-203ENST00000526869 TMEM132BQ14DG7 1078 aa23.14■■□□□ 1.29
SMCO4-203ENST00000526869 ANO6Q4KMQ2 910 aa23.14■■□□□ 1.29
SMCO4-203ENST00000526869 MUM1L1Q5H9M0 696 aa23.14■■□□□ 1.29
SMCO4-203ENST00000526869 SNRNP48Q6IEG0 339 aaKnown RBP23.14■■□□□ 1.29
SMCO4-203ENST00000526869 ETNPPLQ8TBG4 499 aa23.14■■□□□ 1.29
SMCO4-203ENST00000526869 LENG9Q96B70 501 aa23.14■■□□□ 1.29
SMCO4-203ENST00000526869 SLC10A4Q96EP9 437 aa23.14■■□□□ 1.29
SMCO4-203ENST00000526869 LRWD1Q9UFC0 647 aa23.14■■□□□ 1.29
SMCO4-203ENST00000526869 MARCH6O60337 910 aa23.13■■□□□ 1.29
SMCO4-203ENST00000526869 MOGSQ13724 837 aa23.13■■□□□ 1.29
SMCO4-203ENST00000526869 NT5DC1Q5TFE4 455 aa23.13■■□□□ 1.29
SMCO4-203ENST00000526869 PDXDC2PQ6P474 469 aa23.13■■□□□ 1.29
SMCO4-203ENST00000526869 SYTL5Q8TDW5 730 aaPredicted RBP23.13■■□□□ 1.29
SMCO4-203ENST00000526869 PANK2Q9BZ23 570 aa23.13■■□□□ 1.29
SMCO4-203ENST00000526869 TTC12Q9H892 705 aaPredicted RBP23.13■■□□□ 1.29
SMCO4-203ENST00000526869 IGLV3-22A0A075B6J6 115 aa23.12■■□□□ 1.29
SMCO4-203ENST00000526869 FAM86B1E9PN63 330 aa23.12■■□□□ 1.29
SMCO4-203ENST00000526869 SMC2O95347 1197 aa23.12■■□□□ 1.29
SMCO4-203ENST00000526869 FAM86B2P0C5J1 330 aa23.12■■□□□ 1.29
SMCO4-203ENST00000526869 ZNF76P36508 570 aa23.12■■□□□ 1.29
SMCO4-203ENST00000526869 STAT6P42226 847 aa23.12■■□□□ 1.29
SMCO4-203ENST00000526869 NLRP12P59046 1061 aa23.12■■□□□ 1.29
SMCO4-203ENST00000526869 SNAPC2Q13487 334 aa23.12■■□□□ 1.29
SMCO4-203ENST00000526869 PNOCQ13519 176 aa23.12■■□□□ 1.29
SMCO4-203ENST00000526869 PRR16Q569H4 304 aa23.12■■□□□ 1.29
SMCO4-203ENST00000526869 RRAGBQ5VZM2 374 aa23.12■■□□□ 1.29
SMCO4-203ENST00000526869 NIPA1Q7RTP0 329 aa23.12■■□□□ 1.29
SMCO4-203ENST00000526869 SPATA20Q8TB22 786 aa23.12■■□□□ 1.29
SMCO4-203ENST00000526869 PAGE5Q96GU1 130 aa23.12■■□□□ 1.29
SMCO4-203ENST00000526869 GBA2Q9HCG7 927 aaPredicted RBP23.12■■□□□ 1.29
SMCO4-203ENST00000526869 PCDHA12Q9UN75 941 aa23.12■■□□□ 1.29
SMCO4-203ENST00000526869 STK24Q9Y6E0 443 aa23.12■■□□□ 1.29
SMCO4-203ENST00000526869 PP2D1A8MPX8 630 aa23.11■■□□□ 1.29
SMCO4-203ENST00000526869 MYL1P05976 194 aa23.11■■□□□ 1.29
SMCO4-203ENST00000526869 STAT3P40763 770 aa23.11■■□□□ 1.29
SMCO4-203ENST00000526869 IRX3P78415 501 aaPredicted RBP23.11■■□□□ 1.29
SMCO4-203ENST00000526869 SETQ01105 290 aaPredicted RBP23.11■■□□□ 1.29
SMCO4-203ENST00000526869 KARSQ15046 597 aaKnown RBP23.11■■□□□ 1.29
SMCO4-203ENST00000526869 RNF207Q6ZRF8 634 aa23.11■■□□□ 1.29
SMCO4-203ENST00000526869 C2orf69Q8N8R5 385 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms