RNA–Protein interactions for RNA: ENST00000525964.6

NCAPD3-203, Transcript of non-SMC condensin II complex subunit D3, humanhuman

TSL 1 (best)

Gene NCAPD3, Length 5,025 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-203ENST00000525964 TRIM11Q96F44 468 aa15.83■□□□□ 0.12
NCAPD3-203ENST00000525964 VCX3BQ9H321 246 aa15.83■□□□□ 0.12
NCAPD3-203ENST00000525964 TMEM206Q9H813 350 aa15.83■□□□□ 0.12
NCAPD3-203ENST00000525964 KMT5AQ9NQR1 393 aa15.83■□□□□ 0.12
NCAPD3-203ENST00000525964 RIPOR2Q9Y4F9 1068 aa15.83■□□□□ 0.12
NCAPD3-203ENST00000525964 PCDHA5Q9Y5H7 936 aa15.83■□□□□ 0.12
NCAPD3-203ENST00000525964 A6NJR5 290 aa15.82■□□□□ 0.12
NCAPD3-203ENST00000525964 MYL1P05976 194 aa15.82■□□□□ 0.12
NCAPD3-203ENST00000525964 IFNAR1P17181 557 aa15.82■□□□□ 0.12
NCAPD3-203ENST00000525964 CCND2P30279 289 aa15.82■□□□□ 0.12
NCAPD3-203ENST00000525964 NDUFA8P51970 172 aa15.82■□□□□ 0.12
NCAPD3-203ENST00000525964 ITKQ08881 620 aa15.82■□□□□ 0.12
NCAPD3-203ENST00000525964 BFSP1Q12934 665 aa15.82■□□□□ 0.12
NCAPD3-203ENST00000525964 RPS6KA2Q15349 733 aa15.82■□□□□ 0.12
NCAPD3-203ENST00000525964 ELF2Q15723 593 aa15.82■□□□□ 0.12
NCAPD3-203ENST00000525964 TMED8Q6PL24 325 aaPredicted RBP15.82■□□□□ 0.12
NCAPD3-203ENST00000525964 TBCKQ8TEA7 893 aa15.82■□□□□ 0.12
NCAPD3-203ENST00000525964 MRFAP1L1Q96HT8 127 aa15.82■□□□□ 0.12
NCAPD3-203ENST00000525964 HOMER3Q9NSC5 361 aa15.82■□□□□ 0.12
NCAPD3-203ENST00000525964 PRKAG2Q9UGJ0 569 aa15.82■□□□□ 0.12
NCAPD3-203ENST00000525964 LRFN2Q9ULH4 789 aa15.82■□□□□ 0.12
NCAPD3-203ENST00000525964 PPFIA4O75335 1185 aa15.82■□□□□ 0.12
NCAPD3-203ENST00000525964 UBXN2AP68543 259 aa15.82■□□□□ 0.12
NCAPD3-203ENST00000525964 RINT1Q6NUQ1 792 aa15.82■□□□□ 0.12
NCAPD3-203ENST00000525964 NME8Q8N427 588 aa15.82■□□□□ 0.12
NCAPD3-203ENST00000525964 GPATCH11Q8N954 259 aa15.82■□□□□ 0.12
NCAPD3-203ENST00000525964 PIGSQ96S52 555 aa15.82■□□□□ 0.12
NCAPD3-203ENST00000525964 ZNF215Q9UL58 517 aaPredicted RBP15.82■□□□□ 0.12
NCAPD3-203ENST00000525964 CLIC4Q9Y696 253 aa15.82■□□□□ 0.12
NCAPD3-203ENST00000525964 GOLGA8CPA6NN73 597 aa15.82■□□□□ 0.12
NCAPD3-203ENST00000525964 HOXA7P31268 230 aaPredicted RBP15.82■□□□□ 0.12
NCAPD3-203ENST00000525964 ANTXR1Q9H6X2 564 aa15.82■□□□□ 0.12
NCAPD3-203ENST00000525964 POLR3EQ9NVU0 708 aa15.82■□□□□ 0.12
NCAPD3-203ENST00000525964 PNMA3Q9UL41 463 aa15.82■□□□□ 0.12
NCAPD3-203ENST00000525964 NOC2LQ9Y3T9 749 aaKnown RBP15.82■□□□□ 0.12
NCAPD3-203ENST00000525964 ASNSP08243 561 aa15.82■□□□□ 0.12
NCAPD3-203ENST00000525964 LMNB1P20700 586 aa15.82■□□□□ 0.12
NCAPD3-203ENST00000525964 KCNQ4P56696 695 aa15.82■□□□□ 0.12
NCAPD3-203ENST00000525964 FKBP3Q00688 224 aaKnown RBP15.82■□□□□ 0.12
NCAPD3-203ENST00000525964 LCORLQ8N3X6 602 aa15.82■□□□□ 0.12
NCAPD3-203ENST00000525964 TUBGCP2Q9BSJ2 902 aa15.82■□□□□ 0.12
NCAPD3-203ENST00000525964 ABCC12Q96J65 1359 aa15.81■□□□□ 0.12
NCAPD3-203ENST00000525964 ZSCAN20P17040 1043 aaPredicted RBP15.81■□□□□ 0.12
NCAPD3-203ENST00000525964 SLC16A2P36021 539 aa15.81■□□□□ 0.12
NCAPD3-203ENST00000525964 PTPN12Q05209 780 aaKnown RBP15.81■□□□□ 0.12
NCAPD3-203ENST00000525964 CNOT6LQ96LI5 555 aaKnown RBP15.81■□□□□ 0.12
NCAPD3-203ENST00000525964 RAB3IPQ96QF0 476 aaPredicted RBP15.81■□□□□ 0.12
NCAPD3-203ENST00000525964 BCAP29Q9UHQ4 241 aa15.81■□□□□ 0.12
NCAPD3-203ENST00000525964 RPAP1Q9BWH6 1393 aaPredicted RBP15.81■□□□□ 0.12
NCAPD3-203ENST00000525964 EEF1GP26641 437 aaKnown RBP15.81■□□□□ 0.12
NCAPD3-203ENST00000525964 STX2P32856 288 aa15.81■□□□□ 0.12
NCAPD3-203ENST00000525964 COPB1P53618 953 aaKnown RBP15.81■□□□□ 0.12
NCAPD3-203ENST00000525964 RASEFQ8IZ41 740 aa15.81■□□□□ 0.12
NCAPD3-203ENST00000525964 ATF5Q9Y2D1 282 aaPredicted RBP15.81■□□□□ 0.12
NCAPD3-203ENST00000525964 TROVE2P10155 538 aaKnown RBP eCLIP15.81■□□□□ 0.12
NCAPD3-203ENST00000525964 FAM186BQ8IYM0 893 aa15.81■□□□□ 0.12
NCAPD3-203ENST00000525964 SLC10A4Q96EP9 437 aa15.81■□□□□ 0.12
NCAPD3-203ENST00000525964 ZNF148Q9UQR1 794 aa15.81■□□□□ 0.12
NCAPD3-203ENST00000525964 EPN1Q9Y6I3 576 aaPredicted RBP15.81■□□□□ 0.12
NCAPD3-203ENST00000525964 KDM5DQ9BY66 1539 aa15.81■□□□□ 0.12
NCAPD3-203ENST00000525964 ADCK5Q3MIX3 580 aa15.8■□□□□ 0.12
NCAPD3-203ENST00000525964 NUF2Q9BZD4 464 aa15.8■□□□□ 0.12
NCAPD3-203ENST00000525964 CLASP1Q7Z460 1538 aa15.8■□□□□ 0.12
NCAPD3-203ENST00000525964 CTNNA1P35221 906 aaKnown RBP15.8■□□□□ 0.12
NCAPD3-203ENST00000525964 PSMD6Q15008 389 aa15.8■□□□□ 0.12
NCAPD3-203ENST00000525964 PPP4R1Q8TF05 950 aa15.8■□□□□ 0.12
NCAPD3-203ENST00000525964 ARHGEF2Q92974 986 aaKnown RBP15.8■□□□□ 0.12
NCAPD3-203ENST00000525964 FAM149B1Q96BN6 582 aa15.8■□□□□ 0.12
NCAPD3-203ENST00000525964 RILPQ96NA2 401 aa15.8■□□□□ 0.12
NCAPD3-203ENST00000525964 SRP68Q9UHB9 627 aaKnown RBP15.8■□□□□ 0.12
NCAPD3-203ENST00000525964 IPO11Q9UI26 975 aaKnown RBP15.8■□□□□ 0.12
NCAPD3-203ENST00000525964 PCDHB4Q9Y5E5 795 aa15.8■□□□□ 0.12
NCAPD3-203ENST00000525964 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.8■□□□□ 0.121e-5■■■■□ 25.8
NCAPD3-203ENST00000525964 M0R2C6 588 aa15.8■□□□□ 0.12
NCAPD3-203ENST00000525964 GBP1P32455 592 aa15.8■□□□□ 0.12
NCAPD3-203ENST00000525964 LIFRP42702 1097 aa15.8■□□□□ 0.12
NCAPD3-203ENST00000525964 LMNB2Q03252 620 aa15.8■□□□□ 0.12
NCAPD3-203ENST00000525964 TTLL11Q8NHH1 800 aa15.8■□□□□ 0.12
NCAPD3-203ENST00000525964 TSC1Q92574 1164 aa15.8■□□□□ 0.12
NCAPD3-203ENST00000525964 VCXQ9H320 206 aa15.8■□□□□ 0.12
NCAPD3-203ENST00000525964 VPS41P49754 854 aa15.8■□□□□ 0.12
NCAPD3-203ENST00000525964 DIXDC1Q155Q3 683 aa15.8■□□□□ 0.12
NCAPD3-203ENST00000525964 KIAA1841Q6NSI8 718 aa15.8■□□□□ 0.12
NCAPD3-203ENST00000525964 NSUN7Q8NE18 718 aaKnown RBP15.8■□□□□ 0.12
NCAPD3-203ENST00000525964 RASGRP4Q8TDF6 673 aa15.8■□□□□ 0.12
NCAPD3-203ENST00000525964 RSRC1Q96IZ7 334 aaKnown RBP15.8■□□□□ 0.12
NCAPD3-203ENST00000525964 CARMIL3Q8ND23 1372 aa15.8■□□□□ 0.12
NCAPD3-203ENST00000525964 ESYT2A0FGR8 921 aa15.79■□□□□ 0.12
NCAPD3-203ENST00000525964 PRAMEF22A3QJZ6 481 aa15.79■□□□□ 0.12
NCAPD3-203ENST00000525964 PRKAB2O43741 272 aa15.79■□□□□ 0.12
NCAPD3-203ENST00000525964 BRD3Q15059 726 aa15.79■□□□□ 0.12
NCAPD3-203ENST00000525964 SNX25Q9H3E2 840 aa15.79■□□□□ 0.12
NCAPD3-203ENST00000525964 PBRM1Q86U86 1689 aa15.79■□□□□ 0.12
NCAPD3-203ENST00000525964 USP17L8P0C7I0 530 aa15.79■□□□□ 0.12
NCAPD3-203ENST00000525964 RNASELQ05823 741 aaKnown RBP15.79■□□□□ 0.12
NCAPD3-203ENST00000525964 CDKL2Q92772 493 aa15.79■□□□□ 0.12
NCAPD3-203ENST00000525964 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.79■□□□□ 0.12
NCAPD3-203ENST00000525964 PIM2Q9P1W9 311 aa15.79■□□□□ 0.12
NCAPD3-203ENST00000525964 PRPF3O43395 683 aaKnown RBP15.79■□□□□ 0.12
NCAPD3-203ENST00000525964 BUB1O43683 1085 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms