RNA–Protein interactions for RNA: ENST00000525812.1

RPUSD4-202, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 3

Gene RPUSD4, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-202ENST00000525812 CNKSR3Q6P9H4 555 aa8.74□□□□□ -1.01
RPUSD4-202ENST00000525812 EEPD1Q7L9B9 569 aa8.74□□□□□ -1.01
RPUSD4-202ENST00000525812 DEFB128Q7Z7B8 93 aa8.74□□□□□ -1.01
RPUSD4-202ENST00000525812 GJD3Q8N144 294 aa8.74□□□□□ -1.01
RPUSD4-202ENST00000525812 CCDC155Q8N6L0 562 aa8.74□□□□□ -1.01
RPUSD4-202ENST00000525812 NEK9Q8TD19 979 aa8.74□□□□□ -1.01
RPUSD4-202ENST00000525812 TGS1Q96RS0 853 aaKnown RBP8.74□□□□□ -1.01
RPUSD4-202ENST00000525812 CTNNA3Q9UI47 895 aa8.74□□□□□ -1.01
RPUSD4-202ENST00000525812 GBF1Q92538 1859 aa8.74□□□□□ -1.01
RPUSD4-202ENST00000525812 TET1Q8NFU7 2136 aa8.74□□□□□ -1.01
RPUSD4-202ENST00000525812 GRXCR2A6NFK2 248 aa8.73□□□□□ -1.01
RPUSD4-202ENST00000525812 APPP05067 770 aa8.73□□□□□ -1.01
RPUSD4-202ENST00000525812 HOXD8P13378 290 aaPredicted RBP8.73□□□□□ -1.01
RPUSD4-202ENST00000525812 SELPP16109 830 aa8.73□□□□□ -1.01
RPUSD4-202ENST00000525812 PTGS1P23219 599 aa8.73□□□□□ -1.01
RPUSD4-202ENST00000525812 KCNJ6P48051 423 aa8.73□□□□□ -1.01
RPUSD4-202ENST00000525812 WDR5P61964 334 aaKnown RBP8.73□□□□□ -1.01
RPUSD4-202ENST00000525812 HTRA4P83105 476 aaPredicted RBP8.73□□□□□ -1.01
RPUSD4-202ENST00000525812 PPP2R5BQ15173 497 aa8.73□□□□□ -1.01
RPUSD4-202ENST00000525812 ZMYM1Q5SVZ6 1142 aa8.73□□□□□ -1.01
RPUSD4-202ENST00000525812 NSMFQ6X4W1 530 aa8.73□□□□□ -1.01
RPUSD4-202ENST00000525812 RNF207Q6ZRF8 634 aa8.73□□□□□ -1.01
RPUSD4-202ENST00000525812 KCTD1Q719H9 257 aa8.73□□□□□ -1.01
RPUSD4-202ENST00000525812 MICALL1Q8N3F8 863 aa8.73□□□□□ -1.01
RPUSD4-202ENST00000525812 OR6J1Q8NGC5 347 aa8.73□□□□□ -1.01
RPUSD4-202ENST00000525812 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.73□□□□□ -1.01
RPUSD4-202ENST00000525812 SP7Q8TDD2 431 aaPredicted RBP8.73□□□□□ -1.01
RPUSD4-202ENST00000525812 EMID1Q96A84 441 aaPredicted RBP8.73□□□□□ -1.01
RPUSD4-202ENST00000525812 GPATCH3Q96I76 525 aa8.73□□□□□ -1.01
RPUSD4-202ENST00000525812 SAMD11Q96NU1 681 aa8.73□□□□□ -1.01
RPUSD4-202ENST00000525812 PURBQ96QR8 312 aaKnown RBP8.73□□□□□ -1.01
RPUSD4-202ENST00000525812 IWS1Q96ST2 819 aa8.73□□□□□ -1.01
RPUSD4-202ENST00000525812 FTOQ9C0B1 505 aaKnown RBP eCLIP8.73□□□□□ -1.01
RPUSD4-202ENST00000525812 NAPBQ9H115 298 aa8.73□□□□□ -1.01
RPUSD4-202ENST00000525812 UBE2ZQ9H832 354 aaPredicted RBP8.73□□□□□ -1.01
RPUSD4-202ENST00000525812 PRKAG3Q9UGI9 489 aa8.73□□□□□ -1.01
RPUSD4-202ENST00000525812 STX8Q9UNK0 236 aa8.73□□□□□ -1.01
RPUSD4-202ENST00000525812 INSL6Q9Y581 213 aa8.73□□□□□ -1.01
RPUSD4-202ENST00000525812 TTC41PQ6P2S7 1318 aa8.73□□□□□ -1.01
RPUSD4-202ENST00000525812 MYH7P12883 1935 aa8.72□□□□□ -1.01
RPUSD4-202ENST00000525812 MYH4Q9Y623 1939 aa8.72□□□□□ -1.01
RPUSD4-202ENST00000525812 LINC01553A4QN01 128 aa8.72□□□□□ -1.01
RPUSD4-202ENST00000525812 C19orf67A6NJJ6 358 aa8.72□□□□□ -1.01
RPUSD4-202ENST00000525812 TSPY2A6NKD2 308 aa8.72□□□□□ -1.01
RPUSD4-202ENST00000525812 M0R2C6 588 aa8.72□□□□□ -1.01
RPUSD4-202ENST00000525812 HAS3O00219 553 aa8.72□□□□□ -1.01
RPUSD4-202ENST00000525812 NFIBO00712 420 aa8.72□□□□□ -1.01
RPUSD4-202ENST00000525812 FOXP2O15409 715 aa8.72□□□□□ -1.01
RPUSD4-202ENST00000525812 NCK2O43639 380 aa8.72□□□□□ -1.01
RPUSD4-202ENST00000525812 PPFIA4O75335 1185 aa8.72□□□□□ -1.01
RPUSD4-202ENST00000525812 MYL3P08590 195 aa8.72□□□□□ -1.01
RPUSD4-202ENST00000525812 SNHG28P0DPA3 235 aa8.72□□□□□ -1.01
RPUSD4-202ENST00000525812 TXNP10599 105 aaKnown RBP8.72□□□□□ -1.01
RPUSD4-202ENST00000525812 TOP1P11387 765 aaKnown RBP8.72□□□□□ -1.01
RPUSD4-202ENST00000525812 PCP11498 1178 aaKnown RBP8.72□□□□□ -1.01
RPUSD4-202ENST00000525812 RPS6P62753 249 aaKnown RBP8.72□□□□□ -1.01
RPUSD4-202ENST00000525812 IKQ13123 557 aaPredicted RBP8.72□□□□□ -1.01
RPUSD4-202ENST00000525812 PTK7Q13308 1070 aa8.72□□□□□ -1.01
RPUSD4-202ENST00000525812 IKBKEQ14164 716 aa8.72□□□□□ -1.01
RPUSD4-202ENST00000525812 PTGISQ16647 500 aa8.72□□□□□ -1.01
RPUSD4-202ENST00000525812 TRIM71Q2Q1W2 868 aaKnown RBP8.72□□□□□ -1.01
RPUSD4-202ENST00000525812 SYDE2Q5VT97 1194 aa8.72□□□□□ -1.01
RPUSD4-202ENST00000525812 TRAF7Q6Q0C0 670 aa8.72□□□□□ -1.01
RPUSD4-202ENST00000525812 DHX38Q92620 1227 aaKnown RBP8.72□□□□□ -1.01
RPUSD4-202ENST00000525812 KAT2BQ92831 832 aa8.72□□□□□ -1.01
RPUSD4-202ENST00000525812 CERS4Q9HA82 394 aa8.72□□□□□ -1.01
RPUSD4-202ENST00000525812 GTF2IRD1Q9UHL9 959 aa8.72□□□□□ -1.01
RPUSD4-202ENST00000525812 DDX49Q9Y6V7 483 aaKnown RBP8.72□□□□□ -1.01
RPUSD4-202ENST00000525812 LCHNA4D1U4 455 aa8.71□□□□□ -1.02
RPUSD4-202ENST00000525812 NBNO60934 754 aa8.71□□□□□ -1.02
RPUSD4-202ENST00000525812 CKBP12277 381 aa8.71□□□□□ -1.02
RPUSD4-202ENST00000525812 CASTP20810 708 aaKnown RBP8.71□□□□□ -1.02
RPUSD4-202ENST00000525812 PDE4DQ08499 809 aa8.71□□□□□ -1.02
RPUSD4-202ENST00000525812 TTBK2Q6IQ55 1244 aa8.71□□□□□ -1.02
RPUSD4-202ENST00000525812 GDF6Q6KF10 455 aaPredicted RBP8.71□□□□□ -1.02
RPUSD4-202ENST00000525812 LRRC8DQ7L1W4 858 aa8.71□□□□□ -1.02
RPUSD4-202ENST00000525812 STK11IPQ8N1F8 1099 aa8.71□□□□□ -1.02
RPUSD4-202ENST00000525812 SAMD3Q8N6K7 520 aa8.71□□□□□ -1.02
RPUSD4-202ENST00000525812 MRPL38Q96DV4 380 aaKnown RBP8.71□□□□□ -1.02
RPUSD4-202ENST00000525812 MAP3K20Q9NYL2 800 aaKnown RBP8.71□□□□□ -1.02
RPUSD4-202ENST00000525812 LRRC37A2A6NM11 1700 aa8.71□□□□□ -1.02
RPUSD4-202ENST00000525812 PTPDC1A2A3K4 754 aa8.7□□□□□ -1.02
RPUSD4-202ENST00000525812 EIF3JO75822 258 aaKnown RBP8.7□□□□□ -1.02
RPUSD4-202ENST00000525812 ARIH2O95376 493 aa8.7□□□□□ -1.02
RPUSD4-202ENST00000525812 F2P00734 622 aa8.7□□□□□ -1.02
RPUSD4-202ENST00000525812 GH1P01241 217 aa8.7□□□□□ -1.02
RPUSD4-202ENST00000525812 PDHBP11177 359 aa8.7□□□□□ -1.02
RPUSD4-202ENST00000525812 HOXC8P31273 242 aa8.7□□□□□ -1.02
RPUSD4-202ENST00000525812 GHRHRQ02643 423 aa8.7□□□□□ -1.02
RPUSD4-202ENST00000525812 ARHGAP1Q07960 439 aa8.7□□□□□ -1.02
RPUSD4-202ENST00000525812 DGKDQ16760 1214 aa8.7□□□□□ -1.02
RPUSD4-202ENST00000525812 FAM47CQ5HY64 1035 aa8.7□□□□□ -1.02
RPUSD4-202ENST00000525812 GPATCH4Q5T3I0 446 aaKnown RBP8.7□□□□□ -1.02
RPUSD4-202ENST00000525812 BMP8AQ7Z5Y6 402 aa8.7□□□□□ -1.02
RPUSD4-202ENST00000525812 ALYREFQ86V81 257 aaKnown RBP8.7□□□□□ -1.02
RPUSD4-202ENST00000525812 PI4K2BQ8TCG2 481 aa8.7□□□□□ -1.02
RPUSD4-202ENST00000525812 NSUN6Q8TEA1 469 aaKnown RBP8.7□□□□□ -1.02
RPUSD4-202ENST00000525812 ANKS1AQ92625 1134 aa8.7□□□□□ -1.02
RPUSD4-202ENST00000525812 PABPC5Q96DU9 382 aaKnown RBP8.7□□□□□ -1.02
RPUSD4-202ENST00000525812 TMEM47Q9BQJ4 181 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms