RNA–Protein interactions for RNA: ENST00000525506.1

RBBP4-216, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 2

Gene RBBP4, Length 501 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-216ENST00000525506 LY9Q9HBG7 655 aa12.16□□□□□ -0.46
RBBP4-216ENST00000525506 MAD2L2Q9UI95 211 aa12.16□□□□□ -0.46
RBBP4-216ENST00000525506 ABCB11O95342 1321 aa12.15□□□□□ -0.46
RBBP4-216ENST00000525506 COL6A3P12111 3177 aa12.15□□□□□ -0.46
RBBP4-216ENST00000525506 RBM47A0AV96 593 aaKnown RBP12.15□□□□□ -0.46
RBBP4-216ENST00000525506 SH2B2O14492 632 aaPredicted RBP12.15□□□□□ -0.46
RBBP4-216ENST00000525506 PPP1R11O60927 126 aaPredicted RBP12.15□□□□□ -0.46
RBBP4-216ENST00000525506 CALM1P0DP23 149 aa12.15□□□□□ -0.46
RBBP4-216ENST00000525506 CALM2P0DP24 149 aa12.15□□□□□ -0.46
RBBP4-216ENST00000525506 CALM3P0DP25 149 aa12.15□□□□□ -0.46
RBBP4-216ENST00000525506 EDNRBP24530 442 aa12.15□□□□□ -0.46
RBBP4-216ENST00000525506 KIF5BP33176 963 aa12.15□□□□□ -0.46
RBBP4-216ENST00000525506 RCAN1P53805 252 aa12.15□□□□□ -0.46
RBBP4-216ENST00000525506 COL9A3Q14050 684 aaPredicted RBP12.15□□□□□ -0.46
RBBP4-216ENST00000525506 DUSP28Q4G0W2 176 aa12.15□□□□□ -0.46
RBBP4-216ENST00000525506 FAM126BQ8IXS8 530 aa12.15□□□□□ -0.46
RBBP4-216ENST00000525506 FBXL16Q8N461 479 aa12.15□□□□□ -0.46
RBBP4-216ENST00000525506 DNERQ8NFT8 737 aa12.15□□□□□ -0.46
RBBP4-216ENST00000525506 OR6J1Q8NGC5 347 aa12.15□□□□□ -0.46
RBBP4-216ENST00000525506 SYTL5Q8TDW5 730 aaPredicted RBP12.15□□□□□ -0.46
RBBP4-216ENST00000525506 FAM161BQ96MY7 647 aa12.15□□□□□ -0.46
RBBP4-216ENST00000525506 NEK1Q96PY6 1258 aa12.15□□□□□ -0.46
RBBP4-216ENST00000525506 PPP1R12CQ9BZL4 782 aa12.15□□□□□ -0.46
RBBP4-216ENST00000525506 GPHNQ9NQX3 736 aaPredicted RBP12.15□□□□□ -0.46
RBBP4-216ENST00000525506 TBX21Q9UL17 535 aa12.15□□□□□ -0.46
RBBP4-216ENST00000525506 Q9Y3F1 56 aa12.15□□□□□ -0.46
RBBP4-216ENST00000525506 MROH7Q68CQ1 1323 aa12.14□□□□□ -0.47
RBBP4-216ENST00000525506 TRIP12Q14669 1992 aaPredicted RBP12.14□□□□□ -0.47
RBBP4-216ENST00000525506 OPLAHO14841 1288 aa12.14□□□□□ -0.47
RBBP4-216ENST00000525506 ARIH2O95376 493 aa12.14□□□□□ -0.47
RBBP4-216ENST00000525506 TIMP1P01033 207 aa12.14□□□□□ -0.47
RBBP4-216ENST00000525506 MYL3P08590 195 aa12.14□□□□□ -0.47
RBBP4-216ENST00000525506 GNAQP50148 359 aa12.14□□□□□ -0.47
RBBP4-216ENST00000525506 FPGSQ05932 587 aa12.14□□□□□ -0.47
RBBP4-216ENST00000525506 ITGA7Q13683 1181 aa12.14□□□□□ -0.47
RBBP4-216ENST00000525506 GPR153Q6NV75 609 aa12.14□□□□□ -0.47
RBBP4-216ENST00000525506 DHX32Q7L7V1 743 aaKnown RBP12.14□□□□□ -0.47
RBBP4-216ENST00000525506 HOMER1Q86YM7 354 aa12.14□□□□□ -0.47
RBBP4-216ENST00000525506 ZNF654Q8IZM8 581 aa12.14□□□□□ -0.47
RBBP4-216ENST00000525506 SAMD3Q8N6K7 520 aa12.14□□□□□ -0.47
RBBP4-216ENST00000525506 PIBF1Q8WXW3 757 aa12.14□□□□□ -0.47
RBBP4-216ENST00000525506 LZTS2Q9BRK4 669 aa12.14□□□□□ -0.47
RBBP4-216ENST00000525506 TRPV6Q9H1D0 765 aa12.14□□□□□ -0.47
RBBP4-216ENST00000525506 RIOX1Q9H6W3 641 aa12.14□□□□□ -0.47
RBBP4-216ENST00000525506 MTMR10Q9NXD2 777 aa12.14□□□□□ -0.47
RBBP4-216ENST00000525506 MRPL11Q9Y3B7 192 aaKnown RBP12.14□□□□□ -0.47
RBBP4-216ENST00000525506 SCN5AQ14524 2016 aa12.14□□□□□ -0.47
RBBP4-216ENST00000525506 SCN10AQ9Y5Y9 1956 aa12.14□□□□□ -0.47
RBBP4-216ENST00000525506 MYO9BQ13459 2157 aa12.13□□□□□ -0.47
RBBP4-216ENST00000525506 DOCK5Q9H7D0 1870 aa12.13□□□□□ -0.47
RBBP4-216ENST00000525506 CCDC69A6NI79 296 aa12.13□□□□□ -0.47
RBBP4-216ENST00000525506 ZBTB5O15062 677 aa12.13□□□□□ -0.47
RBBP4-216ENST00000525506 ZEB2O60315 1214 aa12.13□□□□□ -0.47
RBBP4-216ENST00000525506 CFBP00751 764 aa12.13□□□□□ -0.47
RBBP4-216ENST00000525506 CD4P01730 458 aa12.13□□□□□ -0.47
RBBP4-216ENST00000525506 CYP2C18P33260 490 aa12.13□□□□□ -0.47
RBBP4-216ENST00000525506 EXOSC10Q01780 885 aaKnown RBP12.13□□□□□ -0.47
RBBP4-216ENST00000525506 GHRHRQ02643 423 aa12.13□□□□□ -0.47
RBBP4-216ENST00000525506 PPP2R5BQ15173 497 aa12.13□□□□□ -0.47
RBBP4-216ENST00000525506 SEPT14Q6ZU15 432 aa12.13□□□□□ -0.47
RBBP4-216ENST00000525506 RASEFQ8IZ41 740 aa12.13□□□□□ -0.47
RBBP4-216ENST00000525506 SLC43A3Q8NBI5 491 aa12.13□□□□□ -0.47
RBBP4-216ENST00000525506 CTCFLQ8NI51 663 aaPredicted RBP12.13□□□□□ -0.47
RBBP4-216ENST00000525506 RNPC3Q96LT9 517 aaKnown RBP12.13□□□□□ -0.47
RBBP4-216ENST00000525506 PIGSQ96S52 555 aa12.13□□□□□ -0.47
RBBP4-216ENST00000525506 RMDN3Q96TC7 470 aa12.13□□□□□ -0.47
RBBP4-216ENST00000525506 MYL10Q9BUA6 226 aa12.13□□□□□ -0.47
RBBP4-216ENST00000525506 SPZ1Q9BXG8 430 aa12.13□□□□□ -0.47
RBBP4-216ENST00000525506 MAP3K20Q9NYL2 800 aaKnown RBP12.13□□□□□ -0.47
RBBP4-216ENST00000525506 UMODL1Q5DID0 1318 aa12.12□□□□□ -0.47
RBBP4-216ENST00000525506 GBF1Q92538 1859 aa12.12□□□□□ -0.47
RBBP4-216ENST00000525506 TLR3O15455 904 aaKnown RBP12.12□□□□□ -0.47
RBBP4-216ENST00000525506 CYTH3O43739 400 aa12.12□□□□□ -0.47
RBBP4-216ENST00000525506 B4GALT4O60513 344 aa12.12□□□□□ -0.47
RBBP4-216ENST00000525506 CABYRO75952 493 aa12.12□□□□□ -0.47
RBBP4-216ENST00000525506 ACRP10323 421 aa12.12□□□□□ -0.47
RBBP4-216ENST00000525506 TXNP10599 105 aaKnown RBP12.12□□□□□ -0.47
RBBP4-216ENST00000525506 CSF2RAP15509 400 aa12.12□□□□□ -0.47
RBBP4-216ENST00000525506 EIF2AK2P19525 551 aaKnown RBP12.12□□□□□ -0.47
RBBP4-216ENST00000525506 HOXA13P31271 388 aaPredicted RBP12.12□□□□□ -0.47
RBBP4-216ENST00000525506 LY6KQ17RY6 165 aa12.12□□□□□ -0.47
RBBP4-216ENST00000525506 C16orf59Q7L2K0 433 aa12.12□□□□□ -0.47
RBBP4-216ENST00000525506 MCF2L2Q86YR7 1114 aa12.12□□□□□ -0.47
RBBP4-216ENST00000525506 NSUN6Q8TEA1 469 aaKnown RBP12.12□□□□□ -0.47
RBBP4-216ENST00000525506 SCFD2Q8WU76 684 aa12.12□□□□□ -0.47
RBBP4-216ENST00000525506 MPHOSPH6Q99547 160 aaKnown RBP12.12□□□□□ -0.47
RBBP4-216ENST00000525506 AMNQ9BXJ7 453 aa12.12□□□□□ -0.47
RBBP4-216ENST00000525506 PCDHA1Q9Y5I3 950 aa12.12□□□□□ -0.47
RBBP4-216ENST00000525506 SLC12A7Q9Y666 1083 aa12.12□□□□□ -0.47
RBBP4-216ENST00000525506 NID2Q14112 1375 aa12.11□□□□□ -0.47
RBBP4-216ENST00000525506 PSMA5P28066 241 aa12.11□□□□□ -0.47
RBBP4-216ENST00000525506 HSD17B4P51659 736 aa12.11□□□□□ -0.47
RBBP4-216ENST00000525506 CHMP4BP1P59074 171 aa12.11□□□□□ -0.47
RBBP4-216ENST00000525506 PURAQ00577 322 aaKnown RBP12.11□□□□□ -0.47
RBBP4-216ENST00000525506 ADCK5Q3MIX3 580 aa12.11□□□□□ -0.47
RBBP4-216ENST00000525506 ARHGEF16Q5VV41 709 aa12.11□□□□□ -0.47
RBBP4-216ENST00000525506 MFSD5Q6N075 450 aa12.11□□□□□ -0.47
RBBP4-216ENST00000525506 CCDC62Q6P9F0 684 aa12.11□□□□□ -0.47
RBBP4-216ENST00000525506 NFXL1Q6ZNB6 911 aa12.11□□□□□ -0.47
RBBP4-216ENST00000525506 RAB11FIP4Q86YS3 637 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms