RNA–Protein interactions for RNA: ENST00000525441.5

NR1H3-228, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 610 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-228ENST00000525441 LBHD1Q9BQE6 289 aaPredicted RBP20.28■□□□□ 0.84
NR1H3-228ENST00000525441 PRO3102Q9H379 93 aa20.28■□□□□ 0.84
NR1H3-228ENST00000525441 COL20A1Q9P218 1284 aa20.28■□□□□ 0.84
NR1H3-228ENST00000525441 A0A1W2PPC1 479 aa20.27■□□□□ 0.84
NR1H3-228ENST00000525441 GCOM1H8Y6P7 765 aaPredicted RBP20.27■□□□□ 0.84
NR1H3-228ENST00000525441 OPLAHO14841 1288 aa20.27■□□□□ 0.84
NR1H3-228ENST00000525441 CTAGE5O15320 804 aa20.27■□□□□ 0.84
NR1H3-228ENST00000525441 EPB41L2O43491 1005 aaKnown RBP20.27■□□□□ 0.84
NR1H3-228ENST00000525441 CABYRO75952 493 aa20.27■□□□□ 0.84
NR1H3-228ENST00000525441 POLR2MP0CAP2 368 aa20.27■□□□□ 0.84
NR1H3-228ENST00000525441 BMP8BP34820 402 aa20.27■□□□□ 0.84
NR1H3-228ENST00000525441 MAGEA10P43363 369 aaPredicted RBP20.27■□□□□ 0.84
NR1H3-228ENST00000525441 FGD1P98174 961 aa20.27■□□□□ 0.84
NR1H3-228ENST00000525441 PPP2R5BQ15173 497 aa20.27■□□□□ 0.84
NR1H3-228ENST00000525441 STXBP2Q15833 593 aa20.27■□□□□ 0.84
NR1H3-228ENST00000525441 MICU3Q86XE3 530 aa20.27■□□□□ 0.84
NR1H3-228ENST00000525441 FANCBQ8NB91 859 aa20.27■□□□□ 0.84
NR1H3-228ENST00000525441 PIBF1Q8WXW3 757 aa20.27■□□□□ 0.84
NR1H3-228ENST00000525441 RXRAP19793 462 aa20.26■□□□□ 0.83
NR1H3-228ENST00000525441 IRX5P78411 483 aaPredicted RBP20.26■□□□□ 0.83
NR1H3-228ENST00000525441 BEX3Q00994 111 aa20.26■□□□□ 0.83
NR1H3-228ENST00000525441 TLE2Q04725 743 aa20.26■□□□□ 0.83
NR1H3-228ENST00000525441 TTLL4Q14679 1199 aa20.26■□□□□ 0.83
NR1H3-228ENST00000525441 BRDTQ58F21 947 aaPredicted RBP20.26■□□□□ 0.83
NR1H3-228ENST00000525441 PRDM5Q9NQX1 630 aaPredicted RBP20.26■□□□□ 0.83
NR1H3-228ENST00000525441 PXMP2Q9NR77 195 aa20.26■□□□□ 0.83
NR1H3-228ENST00000525441 MROH7Q68CQ1 1323 aa20.26■□□□□ 0.83
NR1H3-228ENST00000525441 A0A0U1RQG5 324 aaPredicted RBP20.25■□□□□ 0.83
NR1H3-228ENST00000525441 PQBP1O60828 265 aaKnown RBP20.25■□□□□ 0.83
NR1H3-228ENST00000525441 PLEKHA8P1O95397 391 aa20.25■□□□□ 0.83
NR1H3-228ENST00000525441 EIF2AK2P19525 551 aaKnown RBP20.25■□□□□ 0.83
NR1H3-228ENST00000525441 APOA5Q6Q788 366 aa20.25■□□□□ 0.83
NR1H3-228ENST00000525441 RAB11FIP4Q86YS3 637 aa20.25■□□□□ 0.83
NR1H3-228ENST00000525441 SRBD1Q8N5C6 995 aaKnown RBP20.25■□□□□ 0.83
NR1H3-228ENST00000525441 TCEANC2Q96MN5 208 aa20.25■□□□□ 0.83
NR1H3-228ENST00000525441 JAKMIP1Q96N16 626 aaKnown RBP20.25■□□□□ 0.83
NR1H3-228ENST00000525441 TOX2Q96NM4 488 aa20.25■□□□□ 0.83
NR1H3-228ENST00000525441 RBM28Q9NW13 759 aaKnown RBP20.25■□□□□ 0.83
NR1H3-228ENST00000525441 SNX14Q9Y5W7 946 aa20.25■□□□□ 0.83
NR1H3-228ENST00000525441 DCDC2CA8MYV0 355 aa20.24■□□□□ 0.83
NR1H3-228ENST00000525441 ZBTB43O43298 467 aa20.24■□□□□ 0.83
NR1H3-228ENST00000525441 EIF3JO75822 258 aaKnown RBP20.24■□□□□ 0.83
NR1H3-228ENST00000525441 NR3C2P08235 984 aa20.24■□□□□ 0.83
NR1H3-228ENST00000525441 CLTBP09497 229 aa20.24■□□□□ 0.83
NR1H3-228ENST00000525441 TXNP10599 105 aaKnown RBP20.24■□□□□ 0.83
NR1H3-228ENST00000525441 PSMA5P28066 241 aa20.24■□□□□ 0.83
NR1H3-228ENST00000525441 HOXA13P31271 388 aaPredicted RBP20.24■□□□□ 0.83
NR1H3-228ENST00000525441 CPT1AP50416 773 aa20.24■□□□□ 0.83
NR1H3-228ENST00000525441 BLOC1S2Q6QNY1 142 aa20.24■□□□□ 0.83
NR1H3-228ENST00000525441 TMTC3Q6ZXV5 915 aa20.24■□□□□ 0.83
NR1H3-228ENST00000525441 ANKRD33Q7Z3H0 272 aa20.24■□□□□ 0.83
NR1H3-228ENST00000525441 OR6J1Q8NGC5 347 aa20.24■□□□□ 0.83
NR1H3-228ENST00000525441 UBE2OQ9C0C9 1292 aaKnown RBP20.24■□□□□ 0.83
NR1H3-228ENST00000525441 PDLIM7Q9NR12 457 aa20.24■□□□□ 0.83
NR1H3-228ENST00000525441 MDM2Q00987 491 aaPredicted RBP20.23■□□□□ 0.83
NR1H3-228ENST00000525441 RTN1Q16799 776 aa20.23■□□□□ 0.83
NR1H3-228ENST00000525441 TMEM63BQ5T3F8 832 aa20.23■□□□□ 0.83
NR1H3-228ENST00000525441 CXCL17Q6UXB2 119 aa20.23■□□□□ 0.83
NR1H3-228ENST00000525441 SEPT14Q6ZU15 432 aa20.23■□□□□ 0.83
NR1H3-228ENST00000525441 CUL5Q93034 780 aa20.23■□□□□ 0.83
NR1H3-228ENST00000525441 PDCD2LQ9BRP1 358 aa20.23■□□□□ 0.83
NR1H3-228ENST00000525441 SEZ6LQ9BYH1 1024 aa20.23■□□□□ 0.83
NR1H3-228ENST00000525441 POLR3EQ9NVU0 708 aa20.23■□□□□ 0.83
NR1H3-228ENST00000525441 KLF18A0A0U1RQI7 1052 aa20.22■□□□□ 0.83
NR1H3-228ENST00000525441 ARVCFO00192 962 aa20.22■□□□□ 0.83
NR1H3-228ENST00000525441 PTGS1P23219 599 aa20.22■□□□□ 0.83
NR1H3-228ENST00000525441 RCAN1P53805 252 aa20.22■□□□□ 0.83
NR1H3-228ENST00000525441 FCHSD1Q86WN1 690 aa20.22■□□□□ 0.83
NR1H3-228ENST00000525441 CMTR1Q8N1G2 835 aaKnown RBP20.22■□□□□ 0.83
NR1H3-228ENST00000525441 BRPF3Q9ULD4 1205 aa20.22■□□□□ 0.83
NR1H3-228ENST00000525441 GOLGA8AA7E2F4 631 aa20.21■□□□□ 0.83
NR1H3-228ENST00000525441 GOLGA8BA8MQT2 603 aa20.21■□□□□ 0.83
NR1H3-228ENST00000525441 MYCLP12524 364 aaPredicted RBP20.21■□□□□ 0.83
NR1H3-228ENST00000525441 CCDC82Q8N4S0 544 aa20.21■□□□□ 0.83
NR1H3-228ENST00000525441 SMARCC2Q8TAQ2 1214 aa20.21■□□□□ 0.83
NR1H3-228ENST00000525441 TMEM39AQ9NV64 488 aa20.21■□□□□ 0.83
NR1H3-228ENST00000525441 NAP1L2Q9ULW6 460 aaPredicted RBP20.21■□□□□ 0.83
NR1H3-228ENST00000525441 KIAA0355O15063 1070 aa20.2■□□□□ 0.82
NR1H3-228ENST00000525441 TLR3O15455 904 aaKnown RBP20.2■□□□□ 0.82
NR1H3-228ENST00000525441 KPNA6O60684 536 aa20.2■□□□□ 0.82
NR1H3-228ENST00000525441 CCND2P30279 289 aa20.2■□□□□ 0.82
NR1H3-228ENST00000525441 CDK7P50613 346 aa20.2■□□□□ 0.82
NR1H3-228ENST00000525441 FXR1P51114 621 aaKnown RBP eCLIP20.2■□□□□ 0.82
NR1H3-228ENST00000525441 PGM5Q15124 567 aa20.2■□□□□ 0.82
NR1H3-228ENST00000525441 CCDC62Q6P9F0 684 aa20.2■□□□□ 0.82
NR1H3-228ENST00000525441 Q6ZUG5 572 aa20.2■□□□□ 0.82
NR1H3-228ENST00000525441 VSIG10LQ86VR7 867 aa20.2■□□□□ 0.82
NR1H3-228ENST00000525441 MRVI1Q9Y6F6 885 aa20.2■□□□□ 0.82
NR1H3-228ENST00000525441 DNAH12Q6ZR08 3092 aa20.19■□□□□ 0.82
NR1H3-228ENST00000525441 CCDC196A0A1B0GTZ2 297 aa20.19■□□□□ 0.82
NR1H3-228ENST00000525441 TRIM43BA6NCK2 446 aa20.19■□□□□ 0.82
NR1H3-228ENST00000525441 ARIH2O95376 493 aa20.19■□□□□ 0.82
NR1H3-228ENST00000525441 GH1P01241 217 aa20.19■□□□□ 0.82
NR1H3-228ENST00000525441 MYL3P08590 195 aa20.19■□□□□ 0.82
NR1H3-228ENST00000525441 CPA1P15085 419 aa20.19■□□□□ 0.82
NR1H3-228ENST00000525441 CASTP20810 708 aaKnown RBP20.19■□□□□ 0.82
NR1H3-228ENST00000525441 RPS6KB1P23443 525 aa20.19■□□□□ 0.82
NR1H3-228ENST00000525441 FAAP100Q0VG06 881 aa20.19■□□□□ 0.82
NR1H3-228ENST00000525441 ITGA7Q13683 1181 aa20.19■□□□□ 0.82
NR1H3-228ENST00000525441 KCNV1Q6PIU1 500 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms