RNA–Protein interactions for RNA: ENST00000525132.1

CSDE1-209, Transcript of cold shock domain containing E1, humanhuman

TSL 5

Gene CSDE1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-209ENST00000525132 PI16Q6UXB8 463 aa4.54□□□□□ -1.68
CSDE1-209ENST00000525132 ZGPATQ8N5A5 531 aaKnown RBP4.54□□□□□ -1.68
CSDE1-209ENST00000525132 IL22RA1Q8N6P7 574 aa4.54□□□□□ -1.68
CSDE1-209ENST00000525132 C3orf58Q8NDZ4 430 aa4.54□□□□□ -1.68
CSDE1-209ENST00000525132 EPS8L3Q8TE67 593 aaKnown RBP4.54□□□□□ -1.68
CSDE1-209ENST00000525132 BSNDQ8WZ55 320 aa4.54□□□□□ -1.68
CSDE1-209ENST00000525132 SPACA7Q96KW9 195 aa4.54□□□□□ -1.68
CSDE1-209ENST00000525132 PTPN18Q99952 460 aa4.54□□□□□ -1.68
CSDE1-209ENST00000525132 MUC3BQ9H195 1237 aa4.54□□□□□ -1.68
CSDE1-209ENST00000525132 RBSNQ9H1K0 784 aa4.54□□□□□ -1.68
CSDE1-209ENST00000525132 SOX17Q9H6I2 414 aaPredicted RBP4.54□□□□□ -1.68
CSDE1-209ENST00000525132 PPME1Q9Y570 386 aa4.54□□□□□ -1.68
CSDE1-209ENST00000525132 ARID1BQ8NFD5 2236 aaPredicted RBP4.54□□□□□ -1.68
CSDE1-209ENST00000525132 TLN1Q9Y490 2541 aaKnown RBP4.53□□□□□ -1.68
CSDE1-209ENST00000525132 KIF1BO60333 1816 aa4.53□□□□□ -1.68
CSDE1-209ENST00000525132 DDX60LQ5H9U9 1706 aaKnown RBP4.53□□□□□ -1.68
CSDE1-209ENST00000525132 PNMA6FA0A0J9YX94 578 aa4.53□□□□□ -1.68
CSDE1-209ENST00000525132 ANKRD33BA6NCL7 494 aa4.53□□□□□ -1.68
CSDE1-209ENST00000525132 PDE6BP35913 854 aa4.53□□□□□ -1.68
CSDE1-209ENST00000525132 EPHB4P54760 987 aa4.53□□□□□ -1.68
CSDE1-209ENST00000525132 PLCB3Q01970 1234 aa4.53□□□□□ -1.68
CSDE1-209ENST00000525132 CXCL9Q07325 125 aa4.53□□□□□ -1.68
CSDE1-209ENST00000525132 MBTPS1Q14703 1052 aa4.53□□□□□ -1.68
CSDE1-209ENST00000525132 GRIK4Q16099 956 aa4.53□□□□□ -1.68
CSDE1-209ENST00000525132 HGSNATQ68CP4 663 aa4.53□□□□□ -1.68
CSDE1-209ENST00000525132 OTUD7BQ6GQQ9 843 aa4.53□□□□□ -1.68
CSDE1-209ENST00000525132 GDF6Q6KF10 455 aaPredicted RBP4.53□□□□□ -1.68
CSDE1-209ENST00000525132 SHISA2Q6UWI4 295 aa4.53□□□□□ -1.68
CSDE1-209ENST00000525132 CCDC129Q6ZRS4 1044 aa4.53□□□□□ -1.68
CSDE1-209ENST00000525132 ZSCAN29Q8IWY8 852 aaPredicted RBP4.53□□□□□ -1.68
CSDE1-209ENST00000525132 RTKN2Q8IZC4 609 aa4.53□□□□□ -1.68
CSDE1-209ENST00000525132 BCL2L13Q9BXK5 485 aa4.53□□□□□ -1.68
CSDE1-209ENST00000525132 UPF3BQ9BZI7 483 aaKnown RBP4.53□□□□□ -1.68
CSDE1-209ENST00000525132 LACRTQ9GZZ8 138 aa4.53□□□□□ -1.68
CSDE1-209ENST00000525132 MAP2P11137 1827 aaKnown RBP4.53□□□□□ -1.68
CSDE1-209ENST00000525132 ABCC11Q96J66 1382 aa4.53□□□□□ -1.69
CSDE1-209ENST00000525132 IGF2RP11717 2491 aa4.52□□□□□ -1.69
CSDE1-209ENST00000525132 CEP295Q9C0D2 2601 aa4.52□□□□□ -1.69
CSDE1-209ENST00000525132 PLXNA1Q9UIW2 1896 aa4.52□□□□□ -1.69
CSDE1-209ENST00000525132 SCN7AQ01118 1682 aa4.52□□□□□ -1.69
CSDE1-209ENST00000525132 LAMA5O15230 3695 aa4.52□□□□□ -1.69
CSDE1-209ENST00000525132 H7C1D1 291 aa4.52□□□□□ -1.69
CSDE1-209ENST00000525132 RFXAPO00287 272 aa4.52□□□□□ -1.69
CSDE1-209ENST00000525132 WISP1O95388 367 aa4.52□□□□□ -1.69
CSDE1-209ENST00000525132 B3GALT4O96024 378 aa4.52□□□□□ -1.69
CSDE1-209ENST00000525132 ESRRAP11474 423 aaPredicted RBP4.52□□□□□ -1.69
CSDE1-209ENST00000525132 ZNF423Q2M1K9 1284 aa4.52□□□□□ -1.69
CSDE1-209ENST00000525132 SPRED3Q2MJR0 410 aa4.52□□□□□ -1.69
CSDE1-209ENST00000525132 COL28A1Q2UY09 1125 aa4.52□□□□□ -1.69
CSDE1-209ENST00000525132 TBC1D10BQ4KMP7 808 aaPredicted RBP4.52□□□□□ -1.69
CSDE1-209ENST00000525132 PRRT3Q5FWE3 981 aa4.52□□□□□ -1.69
CSDE1-209ENST00000525132 N4BP2L1Q5TBK1 243 aaPredicted RBP4.52□□□□□ -1.69
CSDE1-209ENST00000525132 ARHGEF25Q86VW2 580 aa4.52□□□□□ -1.69
CSDE1-209ENST00000525132 TMEM130Q8N3G9 435 aa4.52□□□□□ -1.69
CSDE1-209ENST00000525132 TTC16Q8NEE8 873 aa4.52□□□□□ -1.69
CSDE1-209ENST00000525132 OSBPL7Q9BZF2 842 aa4.52□□□□□ -1.69
CSDE1-209ENST00000525132 LIN7BQ9HAP6 207 aa4.52□□□□□ -1.69
CSDE1-209ENST00000525132 OSGEPQ9NPF4 335 aa4.52□□□□□ -1.69
CSDE1-209ENST00000525132 PRKAG2Q9UGJ0 569 aa4.52□□□□□ -1.69
CSDE1-209ENST00000525132 CHD7Q9P2D1 2997 aa4.52□□□□□ -1.69
CSDE1-209ENST00000525132 COL11A2P13942 1736 aaPredicted RBP4.52□□□□□ -1.69
CSDE1-209ENST00000525132 NRXN2Q9P2S2 1712 aa4.52□□□□□ -1.69
CSDE1-209ENST00000525132 ASTN2O75129 1339 aaPredicted RBP4.51□□□□□ -1.69
CSDE1-209ENST00000525132 A0A096LPE4 126 aa4.51□□□□□ -1.69
CSDE1-209ENST00000525132 TMEM238LA0A1B0GVL6 79 aa4.51□□□□□ -1.69
CSDE1-209ENST00000525132 A0A1W2PPZ6 126 aa4.51□□□□□ -1.69
CSDE1-209ENST00000525132 LINC01387J3KSC0 135 aa4.51□□□□□ -1.69
CSDE1-209ENST00000525132 FSCN2O14926 492 aa4.51□□□□□ -1.69
CSDE1-209ENST00000525132 FURINP09958 794 aa4.51□□□□□ -1.69
CSDE1-209ENST00000525132 RAC1P63000 192 aa4.51□□□□□ -1.69
CSDE1-209ENST00000525132 ZP2Q05996 745 aa4.51□□□□□ -1.69
CSDE1-209ENST00000525132 FAAP100Q0VG06 881 aa4.51□□□□□ -1.69
CSDE1-209ENST00000525132 TRIM28Q13263 835 aaKnown RBP4.51□□□□□ -1.69
CSDE1-209ENST00000525132 RPS26P11Q5JNZ5 115 aaPredicted RBP4.51□□□□□ -1.69
CSDE1-209ENST00000525132 PRAMEF18Q5VWM3 479 aa4.51□□□□□ -1.69
CSDE1-209ENST00000525132 STYK1Q6J9G0 422 aa4.51□□□□□ -1.69
CSDE1-209ENST00000525132 IGF2-ASQ6U949 168 aa4.51□□□□□ -1.69
CSDE1-209ENST00000525132 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.51□□□□□ -1.69
CSDE1-209ENST00000525132 KLHL23Q8NBE8 558 aa4.51□□□□□ -1.69
CSDE1-209ENST00000525132 RUBCNQ92622 972 aa4.51□□□□□ -1.69
CSDE1-209ENST00000525132 TRIM56Q9BRZ2 755 aaKnown RBP4.51□□□□□ -1.69
CSDE1-209ENST00000525132 BRIP1Q9BX63 1249 aa4.51□□□□□ -1.69
CSDE1-209ENST00000525132 RNF19AQ9NV58 838 aa4.51□□□□□ -1.69
CSDE1-209ENST00000525132 CPSF1Q10570 1443 aaKnown RBP4.51□□□□□ -1.69
CSDE1-209ENST00000525132 NPC1L1Q9UHC9 1359 aa4.51□□□□□ -1.69
CSDE1-209ENST00000525132 ITGB4P16144 1822 aa4.51□□□□□ -1.69
CSDE1-209ENST00000525132 DMXL2Q8TDJ6 3036 aa4.51□□□□□ -1.69
CSDE1-209ENST00000525132 MYPNQ86TC9 1320 aa4.5□□□□□ -1.69
CSDE1-209ENST00000525132 OTOGLQ3ZCN5 2332 aa4.5□□□□□ -1.69
CSDE1-209ENST00000525132 PIK3C2GO75747 1445 aa4.5□□□□□ -1.69
CSDE1-209ENST00000525132 F8W735 103 aaPredicted RBP4.5□□□□□ -1.69
CSDE1-209ENST00000525132 EFCAB14O75071 495 aa4.5□□□□□ -1.69
CSDE1-209ENST00000525132 PRPF40AO75400 957 aaKnown RBP4.5□□□□□ -1.69
CSDE1-209ENST00000525132 DLGAP3O95886 979 aa4.5□□□□□ -1.69
CSDE1-209ENST00000525132 COL6A1P12109 1028 aa4.5□□□□□ -1.69
CSDE1-209ENST00000525132 LEXMQ3ZCV2 418 aa4.5□□□□□ -1.69
CSDE1-209ENST00000525132 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.5□□□□□ -1.69
CSDE1-209ENST00000525132 TXNDC11Q6PKC3 985 aa4.5□□□□□ -1.69
CSDE1-209ENST00000525132 KIAA1211Q6ZU35 1233 aa4.5□□□□□ -1.69
CSDE1-209ENST00000525132 DZIP1LQ8IYY4 767 aaKnown RBP4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms