RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 RIOX1Q9H6W3 641 aa21.54■■□□□ 1.04
CAPN1-203ENST00000525013 LY9Q9HBG7 655 aa21.54■■□□□ 1.04
CAPN1-203ENST00000525013 TXNP10599 105 aaKnown RBP21.53■■□□□ 1.04
CAPN1-203ENST00000525013 CPT1AP50416 773 aa21.53■■□□□ 1.04
CAPN1-203ENST00000525013 TRAF1Q13077 416 aa21.53■■□□□ 1.04
CAPN1-203ENST00000525013 ITGA7Q13683 1181 aa21.53■■□□□ 1.04
CAPN1-203ENST00000525013 TTLL4Q14679 1199 aa21.53■■□□□ 1.04
CAPN1-203ENST00000525013 C9orf50Q5SZB4 431 aa21.53■■□□□ 1.04
CAPN1-203ENST00000525013 SEPT14Q6ZU15 432 aa21.53■■□□□ 1.04
CAPN1-203ENST00000525013 ZNF654Q8IZM8 581 aa21.53■■□□□ 1.04
CAPN1-203ENST00000525013 PIBF1Q8WXW3 757 aa21.53■■□□□ 1.04
CAPN1-203ENST00000525013 MYL10Q9BUA6 226 aa21.53■■□□□ 1.04
CAPN1-203ENST00000525013 TBX21Q9UL17 535 aa21.53■■□□□ 1.04
CAPN1-203ENST00000525013 PNMA6FA0A0J9YX94 578 aa21.52■■□□□ 1.04
CAPN1-203ENST00000525013 NKRFO15226 690 aaKnown RBP eCLIP21.52■■□□□ 1.04
CAPN1-203ENST00000525013 CYTH3O43739 400 aa21.52■■□□□ 1.04
CAPN1-203ENST00000525013 CDC45O75419 566 aa21.52■■□□□ 1.04
CAPN1-203ENST00000525013 MYL3P08590 195 aa21.52■■□□□ 1.04
CAPN1-203ENST00000525013 EIF2AK2P19525 551 aaKnown RBP21.52■■□□□ 1.04
CAPN1-203ENST00000525013 PSMC6P62333 389 aa21.52■■□□□ 1.04
CAPN1-203ENST00000525013 FPGSQ05932 587 aa21.52■■□□□ 1.04
CAPN1-203ENST00000525013 STXBP2Q15833 593 aa21.52■■□□□ 1.04
CAPN1-203ENST00000525013 BRDTQ58F21 947 aaPredicted RBP21.52■■□□□ 1.04
CAPN1-203ENST00000525013 RNF20Q5VTR2 975 aa21.52■■□□□ 1.04
CAPN1-203ENST00000525013 FAM126BQ8IXS8 530 aa21.52■■□□□ 1.04
CAPN1-203ENST00000525013 CTCFLQ8NI51 663 aaPredicted RBP21.52■■□□□ 1.04
CAPN1-203ENST00000525013 COPS5Q92905 334 aa21.52■■□□□ 1.04
CAPN1-203ENST00000525013 IWS1Q96ST2 819 aa21.52■■□□□ 1.04
CAPN1-203ENST00000525013 POLR3EQ9NVU0 708 aa21.52■■□□□ 1.04
CAPN1-203ENST00000525013 CCDC69A6NI79 296 aa21.51■■□□□ 1.03
CAPN1-203ENST00000525013 OPLAHO14841 1288 aa21.51■■□□□ 1.03
CAPN1-203ENST00000525013 DDAH1O94760 285 aa21.51■■□□□ 1.03
CAPN1-203ENST00000525013 TIMP1P01033 207 aa21.51■■□□□ 1.03
CAPN1-203ENST00000525013 HOXA13P31271 388 aaPredicted RBP21.51■■□□□ 1.03
CAPN1-203ENST00000525013 KIF5BP33176 963 aa21.51■■□□□ 1.03
CAPN1-203ENST00000525013 HSD17B4P51659 736 aa21.51■■□□□ 1.03
CAPN1-203ENST00000525013 TMTC2Q8N394 836 aa21.51■■□□□ 1.03
CAPN1-203ENST00000525013 TMEM87BQ96K49 555 aa21.51■■□□□ 1.03
CAPN1-203ENST00000525013 MTA3Q9BTC8 594 aa21.51■■□□□ 1.03
CAPN1-203ENST00000525013 GRIN2DO15399 1336 aa21.51■■□□□ 1.03
CAPN1-203ENST00000525013 MYH7BA7E2Y1 1941 aa21.51■■□□□ 1.03
CAPN1-203ENST00000525013 SH2B2O14492 632 aaPredicted RBP21.5■■□□□ 1.03
CAPN1-203ENST00000525013 COL9A3Q14050 684 aaPredicted RBP21.5■■□□□ 1.03
CAPN1-203ENST00000525013 GPR153Q6NV75 609 aa21.5■■□□□ 1.03
CAPN1-203ENST00000525013 DEFB123Q8N688 67 aa21.5■■□□□ 1.03
CAPN1-203ENST00000525013 SLC43A3Q8NBI5 491 aa21.5■■□□□ 1.03
CAPN1-203ENST00000525013 LRRC2Q9BYS8 371 aa21.5■■□□□ 1.03
CAPN1-203ENST00000525013 PPP1R12CQ9BZL4 782 aa21.5■■□□□ 1.03
CAPN1-203ENST00000525013 PXMP2Q9NR77 195 aa21.5■■□□□ 1.03
CAPN1-203ENST00000525013 GCOM1H8Y6P7 765 aaPredicted RBP21.49■■□□□ 1.03
CAPN1-203ENST00000525013 ARIH2O95376 493 aa21.49■■□□□ 1.03
CAPN1-203ENST00000525013 NR3C2P08235 984 aa21.49■■□□□ 1.03
CAPN1-203ENST00000525013 POLR2MP0CAP2 368 aa21.49■■□□□ 1.03
CAPN1-203ENST00000525013 EPHB4P54760 987 aa21.49■■□□□ 1.03
CAPN1-203ENST00000525013 PURAQ00577 322 aaKnown RBP21.49■■□□□ 1.03
CAPN1-203ENST00000525013 Q7L0L9 218 aa21.49■■□□□ 1.03
CAPN1-203ENST00000525013 MAP3K14Q99558 947 aa21.49■■□□□ 1.03
CAPN1-203ENST00000525013 MTG1Q9BT17 334 aaPredicted RBP21.49■■□□□ 1.03
CAPN1-203ENST00000525013 SEZ6LQ9BYH1 1024 aa21.49■■□□□ 1.03
CAPN1-203ENST00000525013 TRPV6Q9H1D0 765 aa21.49■■□□□ 1.03
CAPN1-203ENST00000525013 MAP3K20Q9NYL2 800 aaKnown RBP21.49■■□□□ 1.03
CAPN1-203ENST00000525013 EIF3JO75822 258 aaKnown RBP21.48■■□□□ 1.03
CAPN1-203ENST00000525013 CD4P01730 458 aa21.48■■□□□ 1.03
CAPN1-203ENST00000525013 NEFLP07196 543 aa21.48■■□□□ 1.03
CAPN1-203ENST00000525013 MYCLP12524 364 aaPredicted RBP21.48■■□□□ 1.03
CAPN1-203ENST00000525013 LY6KQ17RY6 165 aa21.48■■□□□ 1.03
CAPN1-203ENST00000525013 MFSD5Q6N075 450 aa21.48■■□□□ 1.03
CAPN1-203ENST00000525013 CCDC62Q6P9F0 684 aa21.48■■□□□ 1.03
CAPN1-203ENST00000525013 FCHSD1Q86WN1 690 aa21.48■■□□□ 1.03
CAPN1-203ENST00000525013 SAMD3Q8N6K7 520 aa21.48■■□□□ 1.03
CAPN1-203ENST00000525013 RRP36Q96EU6 259 aaKnown RBP21.48■■□□□ 1.03
CAPN1-203ENST00000525013 A6NJR5 290 aa21.47■■□□□ 1.03
CAPN1-203ENST00000525013 KPNA6O60684 536 aa21.47■■□□□ 1.03
CAPN1-203ENST00000525013 RXRAP19793 462 aa21.47■■□□□ 1.03
CAPN1-203ENST00000525013 LIFRP42702 1097 aa21.47■■□□□ 1.03
CAPN1-203ENST00000525013 GNAQP50148 359 aa21.47■■□□□ 1.03
CAPN1-203ENST00000525013 GHRHRQ02643 423 aa21.47■■□□□ 1.03
CAPN1-203ENST00000525013 RAB11FIP4Q86YS3 637 aa21.47■■□□□ 1.03
CAPN1-203ENST00000525013 RNPC3Q96LT9 517 aaKnown RBP21.47■■□□□ 1.03
CAPN1-203ENST00000525013 LZTS2Q9BRK4 669 aa21.47■■□□□ 1.03
CAPN1-203ENST00000525013 SPZ1Q9BXG8 430 aa21.47■■□□□ 1.03
CAPN1-203ENST00000525013 SEC63Q9UGP8 760 aaKnown RBP21.47■■□□□ 1.03
CAPN1-203ENST00000525013 SLC12A7Q9Y666 1083 aa21.47■■□□□ 1.03
CAPN1-203ENST00000525013 SCN10AQ9Y5Y9 1956 aa21.47■■□□□ 1.03
CAPN1-203ENST00000525013 GH1P01241 217 aa21.46■■□□□ 1.03
CAPN1-203ENST00000525013 CALM1P0DP23 149 aa21.46■■□□□ 1.03
CAPN1-203ENST00000525013 CALM2P0DP24 149 aa21.46■■□□□ 1.03
CAPN1-203ENST00000525013 CALM3P0DP25 149 aa21.46■■□□□ 1.03
CAPN1-203ENST00000525013 CYP2C18P33260 490 aa21.46■■□□□ 1.03
CAPN1-203ENST00000525013 CHMP4BP1P59074 171 aa21.46■■□□□ 1.03
CAPN1-203ENST00000525013 FAM47CQ5HY64 1035 aa21.46■■□□□ 1.03
CAPN1-203ENST00000525013 TMEM199Q8N511 208 aa21.46■■□□□ 1.03
CAPN1-203ENST00000525013 AFG1LQ8WV93 481 aa21.46■■□□□ 1.03
CAPN1-203ENST00000525013 NEK1Q96PY6 1258 aa21.46■■□□□ 1.03
CAPN1-203ENST00000525013 PDCD2LQ9BRP1 358 aa21.46■■□□□ 1.03
CAPN1-203ENST00000525013 HIPK3Q9H422 1215 aa21.46■■□□□ 1.03
CAPN1-203ENST00000525013 MRVI1Q9Y6F6 885 aa21.46■■□□□ 1.03
CAPN1-203ENST00000525013 B4GALT4O60513 344 aa21.45■■□□□ 1.02
CAPN1-203ENST00000525013 PLEKHA8P1O95397 391 aa21.45■■□□□ 1.02
CAPN1-203ENST00000525013 PPIGQ13427 754 aaKnown RBP eCLIP21.45■■□□□ 1.027e-9■■□□□ 12.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms