RNA–Protein interactions for RNA: ENST00000524797.1

TRAPPC4-204, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,924 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-204ENST00000524797 CFBP00751 764 aa12.96□□□□□ -0.33
TRAPPC4-204ENST00000524797 HSD17B4P51659 736 aa12.96□□□□□ -0.33
TRAPPC4-204ENST00000524797 LRIT3Q3SXY7 679 aa12.96□□□□□ -0.33
TRAPPC4-204ENST00000524797 OR6J1Q8NGC5 347 aa12.96□□□□□ -0.33
TRAPPC4-204ENST00000524797 NSUN6Q8TEA1 469 aaKnown RBP12.96□□□□□ -0.33
TRAPPC4-204ENST00000524797 SCFD2Q8WU76 684 aa12.96□□□□□ -0.33
TRAPPC4-204ENST00000524797 LRCH3Q96II8 777 aa12.96□□□□□ -0.33
TRAPPC4-204ENST00000524797 TMEM39AQ9NV64 488 aa12.96□□□□□ -0.33
TRAPPC4-204ENST00000524797 PCDHA1Q9Y5I3 950 aa12.96□□□□□ -0.33
TRAPPC4-204ENST00000524797 SCN10AQ9Y5Y9 1956 aa12.96□□□□□ -0.34
TRAPPC4-204ENST00000524797 NKRFO15226 690 aaKnown RBP eCLIP12.96□□□□□ -0.34
TRAPPC4-204ENST00000524797 ITGB8P26012 769 aa12.96□□□□□ -0.34
TRAPPC4-204ENST00000524797 PPP2R5BQ15173 497 aa12.96□□□□□ -0.34
TRAPPC4-204ENST00000524797 NFXL1Q6ZNB6 911 aa12.96□□□□□ -0.34
TRAPPC4-204ENST00000524797 SAMD3Q8N6K7 520 aa12.96□□□□□ -0.34
TRAPPC4-204ENST00000524797 SLC43A3Q8NBI5 491 aa12.96□□□□□ -0.34
TRAPPC4-204ENST00000524797 IWS1Q96ST2 819 aa12.96□□□□□ -0.34
TRAPPC4-204ENST00000524797 RMDN3Q96TC7 470 aa12.96□□□□□ -0.34
TRAPPC4-204ENST00000524797 PNMA6FA0A0J9YX94 578 aa12.95□□□□□ -0.34
TRAPPC4-204ENST00000524797 CCDC69A6NI79 296 aa12.95□□□□□ -0.34
TRAPPC4-204ENST00000524797 ARIH2O95376 493 aa12.95□□□□□ -0.34
TRAPPC4-204ENST00000524797 LIFRP42702 1097 aa12.95□□□□□ -0.34
TRAPPC4-204ENST00000524797 TRAF1Q13077 416 aa12.95□□□□□ -0.34
TRAPPC4-204ENST00000524797 RNF20Q5VTR2 975 aa12.95□□□□□ -0.34
TRAPPC4-204ENST00000524797 ARHGEF16Q5VV41 709 aa12.95□□□□□ -0.34
TRAPPC4-204ENST00000524797 FAM126BQ8IXS8 530 aa12.95□□□□□ -0.34
TRAPPC4-204ENST00000524797 TMTC2Q8N394 836 aa12.95□□□□□ -0.34
TRAPPC4-204ENST00000524797 CTCFLQ8NI51 663 aaPredicted RBP12.95□□□□□ -0.34
TRAPPC4-204ENST00000524797 COPS5Q92905 334 aa12.95□□□□□ -0.34
TRAPPC4-204ENST00000524797 SPZ1Q9BXG8 430 aa12.95□□□□□ -0.34
TRAPPC4-204ENST00000524797 PXMP2Q9NR77 195 aa12.95□□□□□ -0.34
TRAPPC4-204ENST00000524797 POLR3EQ9NVU0 708 aa12.95□□□□□ -0.34
TRAPPC4-204ENST00000524797 MAP3K20Q9NYL2 800 aaKnown RBP12.95□□□□□ -0.34
TRAPPC4-204ENST00000524797 TBX21Q9UL17 535 aa12.95□□□□□ -0.34
TRAPPC4-204ENST00000524797 GRIN2DO15399 1336 aa12.94□□□□□ -0.34
TRAPPC4-204ENST00000524797 TLR3O15455 904 aaKnown RBP12.94□□□□□ -0.34
TRAPPC4-204ENST00000524797 NEFLP07196 543 aa12.94□□□□□ -0.34
TRAPPC4-204ENST00000524797 RAG1P15918 1043 aa12.94□□□□□ -0.34
TRAPPC4-204ENST00000524797 EIF2AK2P19525 551 aaKnown RBP12.94□□□□□ -0.34
TRAPPC4-204ENST00000524797 KIF5BP33176 963 aa12.94□□□□□ -0.34
TRAPPC4-204ENST00000524797 TTLL4Q14679 1199 aa12.94□□□□□ -0.34
TRAPPC4-204ENST00000524797 LRRC2Q9BYS8 371 aa12.94□□□□□ -0.34
TRAPPC4-204ENST00000524797 CD4P01730 458 aa12.94□□□□□ -0.34
TRAPPC4-204ENST00000524797 MYL3P08590 195 aa12.94□□□□□ -0.34
TRAPPC4-204ENST00000524797 TXNP10599 105 aaKnown RBP12.94□□□□□ -0.34
TRAPPC4-204ENST00000524797 SMARCA1P28370 1054 aa12.94□□□□□ -0.34
TRAPPC4-204ENST00000524797 GNAQP50148 359 aa12.94□□□□□ -0.34
TRAPPC4-204ENST00000524797 CPT1AP50416 773 aa12.94□□□□□ -0.34
TRAPPC4-204ENST00000524797 PSMC6P62333 389 aa12.94□□□□□ -0.34
TRAPPC4-204ENST00000524797 ITGA7Q13683 1181 aa12.94□□□□□ -0.34
TRAPPC4-204ENST00000524797 STXBP2Q15833 593 aa12.94□□□□□ -0.34
TRAPPC4-204ENST00000524797 CCDC62Q6P9F0 684 aa12.94□□□□□ -0.34
TRAPPC4-204ENST00000524797 SEPT14Q6ZU15 432 aa12.94□□□□□ -0.34
TRAPPC4-204ENST00000524797 PIBF1Q8WXW3 757 aa12.94□□□□□ -0.34
TRAPPC4-204ENST00000524797 LZTS2Q9BRK4 669 aa12.94□□□□□ -0.34
TRAPPC4-204ENST00000524797 SEZ6LQ9BYH1 1024 aa12.94□□□□□ -0.34
TRAPPC4-204ENST00000524797 PLEKHA8P1O95397 391 aa12.93□□□□□ -0.34
TRAPPC4-204ENST00000524797 TIMP1P01033 207 aa12.93□□□□□ -0.34
TRAPPC4-204ENST00000524797 NR3C2P08235 984 aa12.93□□□□□ -0.34
TRAPPC4-204ENST00000524797 CALM1P0DP23 149 aa12.93□□□□□ -0.34
TRAPPC4-204ENST00000524797 CALM2P0DP24 149 aa12.93□□□□□ -0.34
TRAPPC4-204ENST00000524797 CALM3P0DP25 149 aa12.93□□□□□ -0.34
TRAPPC4-204ENST00000524797 HOXA13P31271 388 aaPredicted RBP12.93□□□□□ -0.34
TRAPPC4-204ENST00000524797 SHHQ15465 462 aa12.93□□□□□ -0.34
TRAPPC4-204ENST00000524797 TSGA10IPQ3SY00 556 aa12.93□□□□□ -0.34
TRAPPC4-204ENST00000524797 C9orf50Q5SZB4 431 aa12.93□□□□□ -0.34
TRAPPC4-204ENST00000524797 RAB11FIP4Q86YS3 637 aa12.93□□□□□ -0.34
TRAPPC4-204ENST00000524797 RASEFQ8IZ41 740 aa12.93□□□□□ -0.34
TRAPPC4-204ENST00000524797 RRP36Q96EU6 259 aaKnown RBP12.93□□□□□ -0.34
TRAPPC4-204ENST00000524797 NEK1Q96PY6 1258 aa12.93□□□□□ -0.34
TRAPPC4-204ENST00000524797 PDCD2LQ9BRP1 358 aa12.93□□□□□ -0.34
TRAPPC4-204ENST00000524797 GCOM1H8Y6P7 765 aaPredicted RBP12.92□□□□□ -0.34
TRAPPC4-204ENST00000524797 EIF3JO75822 258 aaKnown RBP12.92□□□□□ -0.34
TRAPPC4-204ENST00000524797 POLR2MP0CAP2 368 aa12.92□□□□□ -0.34
TRAPPC4-204ENST00000524797 RXRAP19793 462 aa12.92□□□□□ -0.34
TRAPPC4-204ENST00000524797 EPHB4P54760 987 aa12.92□□□□□ -0.34
TRAPPC4-204ENST00000524797 PURAQ00577 322 aaKnown RBP12.92□□□□□ -0.34
TRAPPC4-204ENST00000524797 FPGSQ05932 587 aa12.92□□□□□ -0.34
TRAPPC4-204ENST00000524797 SGMS1Q86VZ5 419 aa12.92□□□□□ -0.34
TRAPPC4-204ENST00000524797 SRBD1Q8N5C6 995 aaKnown RBP12.92□□□□□ -0.34
TRAPPC4-204ENST00000524797 MTG1Q9BT17 334 aaPredicted RBP12.92□□□□□ -0.34
TRAPPC4-204ENST00000524797 SLC12A7Q9Y666 1083 aa12.92□□□□□ -0.34
TRAPPC4-204ENST00000524797 DOCK5Q9H7D0 1870 aa12.92□□□□□ -0.34
TRAPPC4-204ENST00000524797 A6NJR5 290 aa12.92□□□□□ -0.34
TRAPPC4-204ENST00000524797 KPNA6O60684 536 aa12.92□□□□□ -0.34
TRAPPC4-204ENST00000524797 GH1P01241 217 aa12.92□□□□□ -0.34
TRAPPC4-204ENST00000524797 EXOSC10Q01780 885 aaKnown RBP12.92□□□□□ -0.34
TRAPPC4-204ENST00000524797 ARHGAP1Q07960 439 aa12.92□□□□□ -0.34
TRAPPC4-204ENST00000524797 LY6KQ17RY6 165 aa12.92□□□□□ -0.34
TRAPPC4-204ENST00000524797 ADCK5Q3MIX3 580 aa12.92□□□□□ -0.34
TRAPPC4-204ENST00000524797 BRDTQ58F21 947 aaPredicted RBP12.92□□□□□ -0.34
TRAPPC4-204ENST00000524797 GPR153Q6NV75 609 aa12.92□□□□□ -0.34
TRAPPC4-204ENST00000524797 IL31RAQ8NI17 732 aa12.92□□□□□ -0.34
TRAPPC4-204ENST00000524797 MYCLP12524 364 aaPredicted RBP12.91□□□□□ -0.34
TRAPPC4-204ENST00000524797 KRT32Q14532 448 aa12.91□□□□□ -0.34
TRAPPC4-204ENST00000524797 PGM5Q15124 567 aa12.91□□□□□ -0.34
TRAPPC4-204ENST00000524797 MFSD5Q6N075 450 aa12.91□□□□□ -0.34
TRAPPC4-204ENST00000524797 TMTC3Q6ZXV5 915 aa12.91□□□□□ -0.34
TRAPPC4-204ENST00000524797 DHX32Q7L7V1 743 aaKnown RBP12.91□□□□□ -0.34
TRAPPC4-204ENST00000524797 FCHSD1Q86WN1 690 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 119.4 ms