RNA–Protein interactions for RNA: ENST00000524602.5

CHD7-202, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 1 (best) BASIC

Gene CHD7, Length 3,456 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-202ENST00000524602 SLC51AQ86UW1 340 aa9.26□□□□□ -0.93
CHD7-202ENST00000524602 NOA1Q8NC60 698 aaKnown RBP9.26□□□□□ -0.93
CHD7-202ENST00000524602 EYA3Q99504 573 aa9.26□□□□□ -0.93
CHD7-202ENST00000524602 RAB34Q9BZG1 259 aa9.26□□□□□ -0.93
CHD7-202ENST00000524602 TSPYL1Q9H0U9 437 aa9.26□□□□□ -0.93
CHD7-202ENST00000524602 C10orf71Q711Q0 1435 aa9.26□□□□□ -0.93
CHD7-202ENST00000524602 AARSP49588 968 aaKnown RBP eCLIP9.26□□□□□ -0.93
CHD7-202ENST00000524602 ITIH3Q06033 890 aa9.26□□□□□ -0.93
CHD7-202ENST00000524602 SV2BQ7L1I2 683 aa9.26□□□□□ -0.93
CHD7-202ENST00000524602 CCDC84Q86UT8 332 aaPredicted RBP9.26□□□□□ -0.93
CHD7-202ENST00000524602 REXO1Q8N1G1 1221 aaKnown RBP9.26□□□□□ -0.93
CHD7-202ENST00000524602 LRRC15Q8TF66 581 aa9.26□□□□□ -0.93
CHD7-202ENST00000524602 GPR75-ASB3A0A0A6YYF3 556 aa9.25□□□□□ -0.93
CHD7-202ENST00000524602 RASSF10A6NK89 507 aa9.25□□□□□ -0.93
CHD7-202ENST00000524602 USO1O60763 962 aaKnown RBP9.25□□□□□ -0.93
CHD7-202ENST00000524602 ATP1A1P05023 1023 aaKnown RBP9.25□□□□□ -0.93
CHD7-202ENST00000524602 PRLRP16471 622 aa9.25□□□□□ -0.93
CHD7-202ENST00000524602 CDK8P49336 464 aa9.25□□□□□ -0.93
CHD7-202ENST00000524602 LRRC63Q05C16 580 aa9.25□□□□□ -0.93
CHD7-202ENST00000524602 KIF5AQ12840 1032 aa9.25□□□□□ -0.93
CHD7-202ENST00000524602 STK4Q13043 487 aa9.25□□□□□ -0.93
CHD7-202ENST00000524602 PDIA5Q14554 519 aa9.25□□□□□ -0.93
CHD7-202ENST00000524602 SPA17Q15506 151 aa9.25□□□□□ -0.93
CHD7-202ENST00000524602 TMEM266Q2M3C6 531 aa9.25□□□□□ -0.93
CHD7-202ENST00000524602 UNC13DQ70J99 1090 aa9.25□□□□□ -0.93
CHD7-202ENST00000524602 TRIM58Q8NG06 486 aa9.25□□□□□ -0.93
CHD7-202ENST00000524602 FAM163AQ96GL9 167 aaPredicted RBP9.25□□□□□ -0.93
CHD7-202ENST00000524602 AGPAT5Q9NUQ2 364 aa9.25□□□□□ -0.93
CHD7-202ENST00000524602 TRIM10Q9UDY6 481 aa9.25□□□□□ -0.93
CHD7-202ENST00000524602 PLAGL2Q9UPG8 496 aa9.25□□□□□ -0.93
CHD7-202ENST00000524602 TULP2O00295 520 aa9.25□□□□□ -0.93
CHD7-202ENST00000524602 RPS6KA5O75582 802 aa9.25□□□□□ -0.93
CHD7-202ENST00000524602 LCA5LO95447 670 aa9.25□□□□□ -0.93
CHD7-202ENST00000524602 PSMD2Q13200 908 aa9.25□□□□□ -0.93
CHD7-202ENST00000524602 CCDC70Q6NSX1 233 aa9.25□□□□□ -0.93
CHD7-202ENST00000524602 ZNF572Q7Z3I7 529 aaPredicted RBP9.25□□□□□ -0.93
CHD7-202ENST00000524602 NEK11Q8NG66 645 aa9.25□□□□□ -0.93
CHD7-202ENST00000524602 MTMR9Q96QG7 549 aa9.25□□□□□ -0.93
CHD7-202ENST00000524602 EDEM3Q9BZQ6 932 aa9.25□□□□□ -0.93
CHD7-202ENST00000524602 RIOX1Q9H6W3 641 aa9.25□□□□□ -0.93
CHD7-202ENST00000524602 TRIM37O94972 964 aa9.25□□□□□ -0.93
CHD7-202ENST00000524602 PPP1R18Q6NYC8 613 aa9.25□□□□□ -0.93
CHD7-202ENST00000524602 GUF1Q8N442 669 aaKnown RBP9.25□□□□□ -0.93
CHD7-202ENST00000524602 CNBD1Q8NA66 436 aa9.25□□□□□ -0.93
CHD7-202ENST00000524602 TBCKQ8TEA7 893 aa9.25□□□□□ -0.93
CHD7-202ENST00000524602 CCDC42Q96M95 316 aa9.25□□□□□ -0.93
CHD7-202ENST00000524602 PLIN2Q99541 437 aa9.25□□□□□ -0.93
CHD7-202ENST00000524602 MMTAG2Q9BU76 263 aaKnown RBP9.25□□□□□ -0.93
CHD7-202ENST00000524602 VPS18Q9P253 973 aa9.25□□□□□ -0.93
CHD7-202ENST00000524602 JRKLQ9Y4A0 524 aa9.25□□□□□ -0.93
CHD7-202ENST00000524602 IVLP07476 585 aa9.24□□□□□ -0.93
CHD7-202ENST00000524602 ACTN2P35609 894 aa9.24□□□□□ -0.93
CHD7-202ENST00000524602 TECP42680 631 aa9.24□□□□□ -0.93
CHD7-202ENST00000524602 BTDP43251 543 aa9.24□□□□□ -0.93
CHD7-202ENST00000524602 SEPT2Q15019 361 aa9.24□□□□□ -0.93
CHD7-202ENST00000524602 DIXDC1Q155Q3 683 aa9.24□□□□□ -0.93
CHD7-202ENST00000524602 ZSCAN26Q16670 478 aa9.24□□□□□ -0.93
CHD7-202ENST00000524602 MAN2A1Q16706 1144 aa9.24□□□□□ -0.93
CHD7-202ENST00000524602 SLC4A8Q2Y0W8 1093 aa9.24□□□□□ -0.93
CHD7-202ENST00000524602 VWA3BQ502W6 1294 aa9.24□□□□□ -0.93
CHD7-202ENST00000524602 MAPKAPK5Q8IW41 473 aa9.24□□□□□ -0.93
CHD7-202ENST00000524602 KIAA0895Q8NCT3 520 aa9.24□□□□□ -0.93
CHD7-202ENST00000524602 PCMTD1Q96MG8 357 aaPredicted RBP9.24□□□□□ -0.93
CHD7-202ENST00000524602 JAG2Q9Y219 1238 aa9.24□□□□□ -0.93
CHD7-202ENST00000524602 IL1R1P14778 569 aa9.24□□□□□ -0.93
CHD7-202ENST00000524602 LMAN1P49257 510 aa9.24□□□□□ -0.93
CHD7-202ENST00000524602 CALCRLQ16602 461 aa9.24□□□□□ -0.93
CHD7-202ENST00000524602 ASPRV1Q53RT3 343 aa9.24□□□□□ -0.93
CHD7-202ENST00000524602 LEKR1Q6ZMV7 388 aa9.24□□□□□ -0.93
CHD7-202ENST00000524602 PROM2Q8N271 834 aa9.24□□□□□ -0.93
CHD7-202ENST00000524602 SLC44A5Q8NCS7 719 aa9.24□□□□□ -0.93
CHD7-202ENST00000524602 MMS19Q96T76 1030 aa9.24□□□□□ -0.93
CHD7-202ENST00000524602 RIC8AQ9NPQ8 531 aa9.24□□□□□ -0.93
CHD7-202ENST00000524602 ENC1O14682 589 aa9.24□□□□□ -0.93
CHD7-202ENST00000524602 SLC26A4O43511 780 aa9.24□□□□□ -0.93
CHD7-202ENST00000524602 TACC1O75410 805 aa9.24□□□□□ -0.93
CHD7-202ENST00000524602 GOLGA8HP0CJ92 632 aa9.24□□□□□ -0.93
CHD7-202ENST00000524602 FCER1AP12319 257 aa9.24□□□□□ -0.93
CHD7-202ENST00000524602 CAPN2P17655 700 aa9.24□□□□□ -0.93
CHD7-202ENST00000524602 KRT27Q7Z3Y8 459 aa9.24□□□□□ -0.93
CHD7-202ENST00000524602 TEX11Q8IYF3 940 aa9.24□□□□□ -0.93
CHD7-202ENST00000524602 LARP4BQ92615 738 aaKnown RBP9.24□□□□□ -0.93
CHD7-202ENST00000524602 CDK5RAP3Q96JB5 506 aa9.24□□□□□ -0.93
CHD7-202ENST00000524602 NDST4Q9H3R1 872 aa9.24□□□□□ -0.93
CHD7-202ENST00000524602 SEMA6BQ9H3T3 888 aa9.24□□□□□ -0.93
CHD7-202ENST00000524602 LRWD1Q9UFC0 647 aa9.24□□□□□ -0.93
CHD7-202ENST00000524602 SIK3Q9Y2K2 1263 aa9.24□□□□□ -0.93
CHD7-202ENST00000524602 TFRCP02786 760 aaKnown RBP9.23□□□□□ -0.93
CHD7-202ENST00000524602 GYS1P13807 737 aa9.23□□□□□ -0.93
CHD7-202ENST00000524602 IDEP14735 1019 aa9.23□□□□□ -0.93
CHD7-202ENST00000524602 ATP2B4P23634 1241 aa9.23□□□□□ -0.93
CHD7-202ENST00000524602 GRB10Q13322 594 aa9.23□□□□□ -0.93
CHD7-202ENST00000524602 PRR5LQ6MZQ0 368 aa9.23□□□□□ -0.93
CHD7-202ENST00000524602 CCDC155Q8N6L0 562 aa9.23□□□□□ -0.93
CHD7-202ENST00000524602 TBC1D22AQ8WUA7 517 aa9.23□□□□□ -0.93
CHD7-202ENST00000524602 CCDC102AQ96A19 550 aa9.23□□□□□ -0.93
CHD7-202ENST00000524602 LACRTQ9GZZ8 138 aa9.23□□□□□ -0.93
CHD7-202ENST00000524602 NUCKS1Q9H1E3 243 aaKnown RBP9.23□□□□□ -0.93
CHD7-202ENST00000524602 HDAC6Q9UBN7 1215 aa9.23□□□□□ -0.93
CHD7-202ENST00000524602 SAP30BPQ9UHR5 308 aaKnown RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms