RNA–Protein interactions for RNA: ENST00000524529.6

CNKSR1-209, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 4

Gene CNKSR1, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-209ENST00000524529 ADD3Q9UEY8 706 aaKnown RBP11.29□□□□□ -0.6
CNKSR1-209ENST00000524529 ZEB2O60315 1214 aa11.28□□□□□ -0.6
CNKSR1-209ENST00000524529 CYP2C9P11712 490 aa11.28□□□□□ -0.6
CNKSR1-209ENST00000524529 CHMLP26374 656 aa11.28□□□□□ -0.6
CNKSR1-209ENST00000524529 SLC35G1Q2M3R5 365 aa11.28□□□□□ -0.6
CNKSR1-209ENST00000524529 GPATCH4Q5T3I0 446 aaKnown RBP11.28□□□□□ -0.6
CNKSR1-209ENST00000524529 CYB5R4Q7L1T6 521 aa11.28□□□□□ -0.6
CNKSR1-209ENST00000524529 STAG2Q8N3U4 1231 aa11.28□□□□□ -0.6
CNKSR1-209ENST00000524529 USP38Q8NB14 1042 aa11.28□□□□□ -0.6
CNKSR1-209ENST00000524529 DNERQ8NFT8 737 aa11.28□□□□□ -0.6
CNKSR1-209ENST00000524529 OR6J1Q8NGC5 347 aa11.28□□□□□ -0.6
CNKSR1-209ENST00000524529 RUFY2Q8WXA3 655 aa11.28□□□□□ -0.6
CNKSR1-209ENST00000524529 HERVK_113Q902F9 699 aa11.28□□□□□ -0.6
CNKSR1-209ENST00000524529 SCLYQ96I15 445 aa11.28□□□□□ -0.6
CNKSR1-209ENST00000524529 TAAR1Q96RJ0 339 aa11.28□□□□□ -0.6
CNKSR1-209ENST00000524529 ZSCAN10Q96SZ4 725 aaPredicted RBP11.28□□□□□ -0.6
CNKSR1-209ENST00000524529 ZNF576Q9H609 170 aa11.28□□□□□ -0.6
CNKSR1-209ENST00000524529 TRMT13Q9NUP7 481 aaKnown RBP11.28□□□□□ -0.6
CNKSR1-209ENST00000524529 TNKSO95271 1327 aa11.28□□□□□ -0.6
CNKSR1-209ENST00000524529 OPLAHO14841 1288 aa11.27□□□□□ -0.61
CNKSR1-209ENST00000524529 MYL3P08590 195 aa11.27□□□□□ -0.61
CNKSR1-209ENST00000524529 FOSL2P15408 326 aa11.27□□□□□ -0.61
CNKSR1-209ENST00000524529 SEC23AQ15436 765 aa11.27□□□□□ -0.61
CNKSR1-209ENST00000524529 QRICH1Q2TAL8 776 aa11.27□□□□□ -0.61
CNKSR1-209ENST00000524529 CCDC62Q6P9F0 684 aa11.27□□□□□ -0.61
CNKSR1-209ENST00000524529 PSRC1Q6PGN9 363 aaPredicted RBP11.27□□□□□ -0.61
CNKSR1-209ENST00000524529 IQCA1Q86XH1 822 aa11.27□□□□□ -0.61
CNKSR1-209ENST00000524529 RGS22Q8NE09 1264 aa11.27□□□□□ -0.61
CNKSR1-209ENST00000524529 SYTL5Q8TDW5 730 aaPredicted RBP11.27□□□□□ -0.61
CNKSR1-209ENST00000524529 TIFAQ96CG3 184 aa11.27□□□□□ -0.61
CNKSR1-209ENST00000524529 JMJD4Q9H9V9 463 aa11.27□□□□□ -0.61
CNKSR1-209ENST00000524529 YBX2Q9Y2T7 364 aaKnown RBP11.27□□□□□ -0.61
CNKSR1-209ENST00000524529 TAF6LQ9Y6J9 622 aa11.27□□□□□ -0.61
CNKSR1-209ENST00000524529 DOCK5Q9H7D0 1870 aa11.27□□□□□ -0.61
CNKSR1-209ENST00000524529 NCOR1O75376 2440 aa11.27□□□□□ -0.61
CNKSR1-209ENST00000524529 MUC3AQ02505 3323 aa11.27□□□□□ -0.61
CNKSR1-209ENST00000524529 PRRC2BQ5JSZ5 2229 aaKnown RBP11.27□□□□□ -0.61
CNKSR1-209ENST00000524529 A6NJR5 290 aa11.26□□□□□ -0.61
CNKSR1-209ENST00000524529 PPP1R11O60927 126 aaPredicted RBP11.26□□□□□ -0.61
CNKSR1-209ENST00000524529 PTH1RQ03431 593 aa11.26□□□□□ -0.61
CNKSR1-209ENST00000524529 PDE4DQ08499 809 aa11.26□□□□□ -0.61
CNKSR1-209ENST00000524529 PPP2R5BQ15173 497 aa11.26□□□□□ -0.61
CNKSR1-209ENST00000524529 IMMTQ16891 758 aaKnown RBP11.26□□□□□ -0.61
CNKSR1-209ENST00000524529 NBPF20Q3BBV1 942 aa11.26□□□□□ -0.61
CNKSR1-209ENST00000524529 ASPRV1Q53RT3 343 aa11.26□□□□□ -0.61
CNKSR1-209ENST00000524529 CASC1Q6TDU7 716 aa11.26□□□□□ -0.61
CNKSR1-209ENST00000524529 OTOP2Q7RTS6 562 aa11.26□□□□□ -0.61
CNKSR1-209ENST00000524529 MTMR8Q96EF0 704 aa11.26□□□□□ -0.61
CNKSR1-209ENST00000524529 KAT14Q9H8E8 782 aa11.26□□□□□ -0.61
CNKSR1-209ENST00000524529 SENP2Q9HC62 589 aa11.26□□□□□ -0.61
CNKSR1-209ENST00000524529 VAT1LQ9HCJ6 419 aa11.26□□□□□ -0.61
CNKSR1-209ENST00000524529 POLR3EQ9NVU0 708 aa11.26□□□□□ -0.61
CNKSR1-209ENST00000524529 PNMA2Q9UL42 364 aa11.26□□□□□ -0.61
CNKSR1-209ENST00000524529 RAD50Q92878 1312 aa11.26□□□□□ -0.61
CNKSR1-209ENST00000524529 NKRFO15226 690 aaKnown RBP eCLIP11.25□□□□□ -0.61
CNKSR1-209ENST00000524529 FGBP02675 491 aa11.25□□□□□ -0.61
CNKSR1-209ENST00000524529 TXNP10599 105 aaKnown RBP11.25□□□□□ -0.61
CNKSR1-209ENST00000524529 NT5C2P49902 561 aa11.25□□□□□ -0.61
CNKSR1-209ENST00000524529 CPT1AP50416 773 aa11.25□□□□□ -0.61
CNKSR1-209ENST00000524529 RABGGTBP53611 331 aa11.25□□□□□ -0.61
CNKSR1-209ENST00000524529 ADGRE1Q14246 886 aa11.25□□□□□ -0.61
CNKSR1-209ENST00000524529 TTLL4Q14679 1199 aa11.25□□□□□ -0.61
CNKSR1-209ENST00000524529 LY6KQ17RY6 165 aa11.25□□□□□ -0.61
CNKSR1-209ENST00000524529 CCDC178Q5BJE1 867 aa11.25□□□□□ -0.61
CNKSR1-209ENST00000524529 SCFD2Q8WU76 684 aa11.25□□□□□ -0.61
CNKSR1-209ENST00000524529 CTAGE1Q96RT6 745 aa11.25□□□□□ -0.61
CNKSR1-209ENST00000524529 MTG1Q9BT17 334 aaPredicted RBP11.25□□□□□ -0.61
CNKSR1-209ENST00000524529 SEZ6LQ9BYH1 1024 aa11.25□□□□□ -0.61
CNKSR1-209ENST00000524529 PRDM6Q9NQX0 595 aa11.25□□□□□ -0.61
CNKSR1-209ENST00000524529 MAD2L2Q9UI95 211 aa11.25□□□□□ -0.61
CNKSR1-209ENST00000524529 ABCB11O95342 1321 aa11.25□□□□□ -0.61
CNKSR1-209ENST00000524529 REV3LO60673 3130 aa11.24□□□□□ -0.61
CNKSR1-209ENST00000524529 SGSM2O43147 1006 aa11.24□□□□□ -0.61
CNKSR1-209ENST00000524529 CDC45O75419 566 aa11.24□□□□□ -0.61
CNKSR1-209ENST00000524529 CYP21A2P08686 494 aa11.24□□□□□ -0.61
CNKSR1-209ENST00000524529 PARP1P09874 1014 aaKnown RBP11.24□□□□□ -0.61
CNKSR1-209ENST00000524529 MYOGP15173 224 aa11.24□□□□□ -0.61
CNKSR1-209ENST00000524529 ARHGAP1Q07960 439 aa11.24□□□□□ -0.61
CNKSR1-209ENST00000524529 SEPT14Q6ZU15 432 aa11.24□□□□□ -0.61
CNKSR1-209ENST00000524529 FBXO11Q86XK2 927 aa11.24□□□□□ -0.61
CNKSR1-209ENST00000524529 AFG1LQ8WV93 481 aa11.24□□□□□ -0.61
CNKSR1-209ENST00000524529 KAT2BQ92831 832 aa11.24□□□□□ -0.61
CNKSR1-209ENST00000524529 KRT23Q9C075 422 aa11.24□□□□□ -0.61
CNKSR1-209ENST00000524529 NKX2-4Q9H2Z4 354 aa11.24□□□□□ -0.61
CNKSR1-209ENST00000524529 PRDM12Q9H4Q4 367 aa11.24□□□□□ -0.61
CNKSR1-209ENST00000524529 BRWD1Q9NSI6 2320 aa11.23□□□□□ -0.61
CNKSR1-209ENST00000524529 PALM3A6NDB9 673 aaPredicted RBP11.23□□□□□ -0.61
CNKSR1-209ENST00000524529 CYTH3O43739 400 aa11.23□□□□□ -0.61
CNKSR1-209ENST00000524529 EIF5BO60841 1220 aaKnown RBP11.23□□□□□ -0.61
CNKSR1-209ENST00000524529 RGS20O76081 388 aa11.23□□□□□ -0.61
CNKSR1-209ENST00000524529 MMP3P08254 477 aa11.23□□□□□ -0.61
CNKSR1-209ENST00000524529 EIF2AK2P19525 551 aaKnown RBP11.23□□□□□ -0.61
CNKSR1-209ENST00000524529 HSD17B4P51659 736 aa11.23□□□□□ -0.61
CNKSR1-209ENST00000524529 GHRHRQ02643 423 aa11.23□□□□□ -0.61
CNKSR1-209ENST00000524529 COL9A3Q14050 684 aaPredicted RBP11.23□□□□□ -0.61
CNKSR1-209ENST00000524529 GPNMBQ14956 572 aa11.23□□□□□ -0.61
CNKSR1-209ENST00000524529 FAM47CQ5HY64 1035 aa11.23□□□□□ -0.61
CNKSR1-209ENST00000524529 IFIT1BQ5T764 474 aaKnown RBP11.23□□□□□ -0.61
CNKSR1-209ENST00000524529 NFRKBQ6P4R8 1299 aa11.23□□□□□ -0.61
CNKSR1-209ENST00000524529 STOX1Q6ZVD7 989 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms