RNA–Protein interactions for RNA: ENST00000524442.1

TTC39A-213, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 3

Gene TTC39A, Length 413 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-213ENST00000524442 COL6A1P12109 1028 aa11.65□□□□□ -0.54
TTC39A-213ENST00000524442 MNX1P50219 401 aaPredicted RBP11.65□□□□□ -0.54
TTC39A-213ENST00000524442 NEK4P51957 841 aa11.65□□□□□ -0.54
TTC39A-213ENST00000524442 NKX3-2P78367 333 aa11.65□□□□□ -0.54
TTC39A-213ENST00000524442 TNFAIP2Q03169 654 aa11.65□□□□□ -0.54
TTC39A-213ENST00000524442 PFKFB3Q16875 520 aaPredicted RBP11.65□□□□□ -0.54
TTC39A-213ENST00000524442 HEATR3Q7Z4Q2 680 aa11.65□□□□□ -0.54
TTC39A-213ENST00000524442 TRIM22Q8IYM9 498 aa11.65□□□□□ -0.54
TTC39A-213ENST00000524442 SMARCC2Q8TAQ2 1214 aa11.65□□□□□ -0.54
TTC39A-213ENST00000524442 SCFD2Q8WU76 684 aa11.65□□□□□ -0.54
TTC39A-213ENST00000524442 CCDC12Q8WUD4 166 aaPredicted RBP11.65□□□□□ -0.54
TTC39A-213ENST00000524442 PAWRQ96IZ0 340 aaKnown RBP11.65□□□□□ -0.54
TTC39A-213ENST00000524442 PDCD2LQ9BRP1 358 aa11.65□□□□□ -0.54
TTC39A-213ENST00000524442 TSEN34Q9BSV6 310 aaKnown RBP11.65□□□□□ -0.54
TTC39A-213ENST00000524442 C11orf49Q9H6J7 331 aa11.65□□□□□ -0.54
TTC39A-213ENST00000524442 BARHL2Q9NY43 387 aa11.65□□□□□ -0.54
TTC39A-213ENST00000524442 BRCA2P51587 3418 aa11.65□□□□□ -0.54
TTC39A-213ENST00000524442 BAZ2BQ9UIF8 2168 aaKnown RBP11.65□□□□□ -0.54
TTC39A-213ENST00000524442 MYH6P13533 1939 aa11.64□□□□□ -0.55
TTC39A-213ENST00000524442 hCG_1642624A0A1W2PR95 340 aa11.64□□□□□ -0.55
TTC39A-213ENST00000524442 MEIS2O14770 477 aa11.64□□□□□ -0.55
TTC39A-213ENST00000524442 NKRFO15226 690 aaKnown RBP eCLIP11.64□□□□□ -0.55
TTC39A-213ENST00000524442 PFKFB2O60825 505 aa11.64□□□□□ -0.55
TTC39A-213ENST00000524442 ADAMTS4O75173 837 aa11.64□□□□□ -0.55
TTC39A-213ENST00000524442 STAM2O75886 525 aa11.64□□□□□ -0.55
TTC39A-213ENST00000524442 CDKL5O76039 1030 aa11.64□□□□□ -0.55
TTC39A-213ENST00000524442 SCG2P13521 617 aa11.64□□□□□ -0.55
TTC39A-213ENST00000524442 EIF2AK2P19525 551 aaKnown RBP11.64□□□□□ -0.55
TTC39A-213ENST00000524442 CST5P28325 142 aaPredicted RBP11.64□□□□□ -0.55
TTC39A-213ENST00000524442 HOXA13P31271 388 aaPredicted RBP11.64□□□□□ -0.55
TTC39A-213ENST00000524442 ADCYAP1R1P41586 468 aa11.64□□□□□ -0.55
TTC39A-213ENST00000524442 AK2P54819 239 aa11.64□□□□□ -0.55
TTC39A-213ENST00000524442 NAPAP54920 295 aa11.64□□□□□ -0.55
TTC39A-213ENST00000524442 GJA9P57773 515 aa11.64□□□□□ -0.55
TTC39A-213ENST00000524442 CCT2P78371 535 aaKnown RBP11.64□□□□□ -0.55
TTC39A-213ENST00000524442 LRRC41Q15345 812 aa11.64□□□□□ -0.55
TTC39A-213ENST00000524442 DUSP28Q4G0W2 176 aa11.64□□□□□ -0.55
TTC39A-213ENST00000524442 ANO1Q5XXA6 986 aa11.64□□□□□ -0.55
TTC39A-213ENST00000524442 WWC2Q6AWC2 1192 aa11.64□□□□□ -0.55
TTC39A-213ENST00000524442 XRRA1Q6P2D8 792 aa11.64□□□□□ -0.55
TTC39A-213ENST00000524442 EEPD1Q7L9B9 569 aa11.64□□□□□ -0.55
TTC39A-213ENST00000524442 VSIG10LQ86VR7 867 aa11.64□□□□□ -0.55
TTC39A-213ENST00000524442 FBXO16Q8IX29 292 aaPredicted RBP11.64□□□□□ -0.55
TTC39A-213ENST00000524442 FAM177A1Q8N128 213 aaPredicted RBP11.64□□□□□ -0.55
TTC39A-213ENST00000524442 WDR11Q9BZH6 1224 aa11.64□□□□□ -0.55
TTC39A-213ENST00000524442 UPF3AQ9H1J1 476 aaKnown RBP11.64□□□□□ -0.55
TTC39A-213ENST00000524442 SLKQ9H2G2 1235 aaPredicted RBP11.64□□□□□ -0.55
TTC39A-213ENST00000524442 TPCN1Q9ULQ1 816 aa11.64□□□□□ -0.55
TTC39A-213ENST00000524442 GNEQ9Y223 722 aaKnown RBP11.64□□□□□ -0.55
TTC39A-213ENST00000524442 FRMPD4Q14CM0 1322 aa11.63□□□□□ -0.55
TTC39A-213ENST00000524442 SYNRGQ9UMZ2 1314 aa11.63□□□□□ -0.55
TTC39A-213ENST00000524442 LCTP09848 1927 aa11.63□□□□□ -0.55
TTC39A-213ENST00000524442 ESYT2A0FGR8 921 aa11.63□□□□□ -0.55
TTC39A-213ENST00000524442 MOXD2PA6NHM9 499 aa11.63□□□□□ -0.55
TTC39A-213ENST00000524442 PGK1P00558 417 aa11.63□□□□□ -0.55
TTC39A-213ENST00000524442 FOSP01100 380 aaPredicted RBP11.63□□□□□ -0.55
TTC39A-213ENST00000524442 SMPD1P17405 629 aa11.63□□□□□ -0.55
TTC39A-213ENST00000524442 CCND2P30279 289 aa11.63□□□□□ -0.55
TTC39A-213ENST00000524442 SSRP1Q08945 709 aaKnown RBP11.63□□□□□ -0.55
TTC39A-213ENST00000524442 TTLL4Q14679 1199 aa11.63□□□□□ -0.55
TTC39A-213ENST00000524442 PGM5Q15124 567 aa11.63□□□□□ -0.55
TTC39A-213ENST00000524442 GJC2Q5T442 439 aaPredicted RBP11.63□□□□□ -0.55
TTC39A-213ENST00000524442 MCTP2Q6DN12 878 aa11.63□□□□□ -0.55
TTC39A-213ENST00000524442 KCNV1Q6PIU1 500 aa11.63□□□□□ -0.55
TTC39A-213ENST00000524442 USP17L6PQ6QN14 398 aa11.63□□□□□ -0.55
TTC39A-213ENST00000524442 NOL8Q76FK4 1167 aaKnown RBP11.63□□□□□ -0.55
TTC39A-213ENST00000524442 FCHSD1Q86WN1 690 aa11.63□□□□□ -0.55
TTC39A-213ENST00000524442 PCSK9Q8NBP7 692 aaKnown RBP11.63□□□□□ -0.55
TTC39A-213ENST00000524442 KLHDC9Q8NEP7 349 aa11.63□□□□□ -0.55
TTC39A-213ENST00000524442 DIS3LQ8TF46 1054 aaKnown RBP11.63□□□□□ -0.55
TTC39A-213ENST00000524442 GPKOWQ92917 476 aaPredicted RBP eCLIP11.63□□□□□ -0.55
TTC39A-213ENST00000524442 AP5M1Q9H0R1 490 aa11.63□□□□□ -0.55
TTC39A-213ENST00000524442 EHMT1Q9H9B1 1298 aa11.63□□□□□ -0.55
TTC39A-213ENST00000524442 NCOA5Q9HCD5 579 aaKnown RBP11.63□□□□□ -0.55
TTC39A-213ENST00000524442 RIC8AQ9NPQ8 531 aa11.63□□□□□ -0.55
TTC39A-213ENST00000524442 PDGFCQ9NRA1 345 aa11.63□□□□□ -0.55
TTC39A-213ENST00000524442 PHF24Q9UPV7 400 aa11.63□□□□□ -0.55
TTC39A-213ENST00000524442 DDX49Q9Y6V7 483 aaKnown RBP11.63□□□□□ -0.55
TTC39A-213ENST00000524442 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.62□□□□□ -0.55
TTC39A-213ENST00000524442 SMCO2A6NFE2 343 aa11.62□□□□□ -0.55
TTC39A-213ENST00000524442 SPDYE3A6NKU9 549 aa11.62□□□□□ -0.55
TTC39A-213ENST00000524442 STXBP3O00186 592 aa11.62□□□□□ -0.55
TTC39A-213ENST00000524442 ADCY6O43306 1168 aa11.62□□□□□ -0.55
TTC39A-213ENST00000524442 DEXIO95424 95 aa11.62□□□□□ -0.55
TTC39A-213ENST00000524442 C6orf222P0C671 652 aaPredicted RBP11.62□□□□□ -0.55
TTC39A-213ENST00000524442 TGFB3P10600 412 aa11.62□□□□□ -0.55
TTC39A-213ENST00000524442 GNA11P29992 359 aa11.62□□□□□ -0.55
TTC39A-213ENST00000524442 ADCY7P51828 1080 aa11.62□□□□□ -0.55
TTC39A-213ENST00000524442 PKN1Q16512 942 aa11.62□□□□□ -0.55
TTC39A-213ENST00000524442 GNPTABQ3T906 1256 aa11.62□□□□□ -0.55
TTC39A-213ENST00000524442 TLK2Q86UE8 772 aa11.62□□□□□ -0.55
TTC39A-213ENST00000524442 CCDC148Q8NFR7 591 aa11.62□□□□□ -0.55
TTC39A-213ENST00000524442 PHKBQ93100 1093 aa11.62□□□□□ -0.55
TTC39A-213ENST00000524442 KIF2CQ99661 725 aa11.62□□□□□ -0.55
TTC39A-213ENST00000524442 LARP6Q9BRS8 491 aaKnown RBP11.62□□□□□ -0.55
TTC39A-213ENST00000524442 SLC26A6Q9BXS9 759 aa11.62□□□□□ -0.55
TTC39A-213ENST00000524442 C6orf50Q9HD87 102 aa11.62□□□□□ -0.55
TTC39A-213ENST00000524442 SH3GLB2Q9NR46 395 aa11.62□□□□□ -0.55
TTC39A-213ENST00000524442 ZEB2O60315 1214 aa11.61□□□□□ -0.55
TTC39A-213ENST00000524442 MYCNP04198 464 aaPredicted RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms